Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq226 98.7 7e-16 >seq226 Length=19278 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27100 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCC 27159 || ||||||||||| | |||| | | | ||||| ||| | || ||||| || Sbjct 16518 AGGGTGGGAAAGGGGCGGGGCGCGCGCGTCAGCTGGACGCGCAGGGCGTCGACGTGGTCG 16577 Query 27160 AGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 27219 ||||||||| ||||| || ||| |||| | | || || | || ||| |||| Sbjct 16578 GCGTAGACGTGGGCGTCGCCGAGGACGTGGGTCAGCGAGCCGGGGACGAGGCCGCAGACG 16637 Query 27220 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 27279 | || | ||||| ||||| || | ||||||||| ||||| ||||| || ||||| ||| Sbjct 16638 CGGGCGAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCC 16697 Query 27280 ATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 ||||| | || | |||||||||||| || Sbjct 16698 ATGTCGCAGGAGCGCTGGTAGAGCTGGCA 16726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369503128954424