Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq233 163 2e-35
seq204 156 3e-33
seq23 131 1e-25
>seq233
Length=18884
Score = 163 bits (180), Expect = 2e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||||||| |||||||||||||| ||||||||||| || |
Sbjct 1349 CCACCCCGCAGCCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 1408
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| ||||||||||| || |||||||||| |||||||| || | ||
Sbjct 1409 AGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGCCGCTGCTGGTCCGGCGGG 1468
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| |||||| ||| | | | || |||||| | ||||||
Sbjct 1469 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCGCTGCTCTCCACC 1528
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| | |||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct 1529 TCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 1576
Score = 150 bits (166), Expect = 1e-31
Identities = 176/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | ||| | | ||||||||| ||||| |||||| |||||||||||
Sbjct 2026 TTGCATACCGCCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTA 2085
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || ||| | || ||||||||||| || |||||||||| |||||||| ||
Sbjct 2086 GTCGCTCAGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTC 2145
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| || | || ||||| ||| |||||| ||| | | | || ||||| | ||
Sbjct 2146 CGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGA 2205
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|||||||||| || |||||||| || ||||| ||||| ||||||||||||||||||
Sbjct 2206 CTCCACCTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCATGATG 2263
Score = 143 bits (158), Expect = 2e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||||||| |||||||||||||| || |||||||| ||
Sbjct 1573 CATGCCACCGCGCAGACGGAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC 1632
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || ||||||||||| || || || |||| |||||||| || |
Sbjct 1633 GGACAGCGTCCGCCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGG 1692
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| |||||| ||| | | | || |||||| | ||
Sbjct 1693 CGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGCTGCTCTC 1752
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||| | |||||||||||| ||||| |||||||| || ||||| ||||||
Sbjct 1753 CACCTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATG 1804
Score = 138 bits (152), Expect = 8e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | | ||||||||| ||||| |||||| || |||||||| ||
Sbjct 1801 CATGCCACCGCGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTC 1860
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| ||||||||||| || |||||||| | |||||||| || |
Sbjct 1861 GCTCAGGGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGG 1920
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| |||||| ||| | | | || ||||| | || ||
Sbjct 1921 CGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTC 1980
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || |||||||| || ||||| ||||| ||||||||||||||
Sbjct 1981 CACCTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 2031
>seq204
Length=21219
Score = 156 bits (172), Expect = 3e-33
Identities = 173/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||||||| |||||||||||||| ||||||||||| |||| |
Sbjct 5911 CCGCCACGCAGGCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 5852
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| || |||||||| ||||| ||||||| |||||||| || | ||
Sbjct 5851 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 5792
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| ||||| ||| || ||| | || ||||| | | ||||
Sbjct 5791 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATCGTGTCCGAGCTCTCCA 5734
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || || ||||| |||||||||||||| |||||||| |||||
Sbjct 5733 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 5685
>seq23
Length=165582
Score = 131 bits (144), Expect = 1e-25
Identities = 164/223 (74%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || || | ||| | || ||||||||| || || |||||| ||||||||||| |||
Sbjct 62224 ATACCACCGCGCAGACGCAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCG 62165
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| || || |||| ||||||||||| || |||||||||| |||||||| || |
Sbjct 62164 GACAGGGTCCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCCGGC 62105
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| || ||| | || ||||| | ||| |
Sbjct 62104 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATCGTGTCCGAGGACT 62047
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
| ||||||| || || ||||| ||||| ||||||||||||||
Sbjct 62046 CGACCTCCAAAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 62004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359986433805768
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