Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq46 95.1 1e-14 >seq46 Length=146035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 376/587 (64%), Gaps = 15/587 (3%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || |||||| || || || ||||| | || || || ||||||||||| Sbjct 141794 AGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTC 141853 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| || || || |||||||| || | ||||| | || || ||| Sbjct 141854 AGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAG 141913 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || |||||||| || | |||||||| | | || | || | || | || || | Sbjct 141914 AAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCG 141973 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 |||||| ||| | |||| ||||| || | || || || || || ||||| Sbjct 141974 GCAATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCG 142033 Query 16439 TTAAACA-ATTTCT-CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496 ||||| | || | | | | | | | | || || ||||||||||| | || Sbjct 142034 TTAAAGAGATAAGTGCGCTGGGCGGGCT--CCTTGATGTAAGTATCAATCAGCAGGGAGT 142091 Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556 | | || ||||| |||||||| || ||||| || || |||||||| |||||||| | Sbjct 142092 AGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGG 142151 Query 16557 CTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616 | || || || || |||| || || | |||||||| ||||| || || ||| | Sbjct 142152 GAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAG 142211 Query 16617 CAGCAAAAAACGCCAATATGTG---CTTAATGAAAT----ATTTTTCGTCAGATGTAAGA 16669 ||||||| || || | ||||| ||| ||| | || || ||| | | Sbjct 142212 CAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCA----TGCGG 142267 Query 16670 ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCC 16729 | | ||| || | | ||| || || | ||| | || || | ||||| || |||| Sbjct 142268 TTGTTCCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCC 142327 Query 16730 ACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | ||||| || ||||| | |||||| |||| ||| | ||||| || Sbjct 142328 TCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAA 142374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410283114080