Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq46 95.1 1e-14
>seq46
Length=146035
Score = 95.1 bits (104), Expect = 1e-14
Identities = 376/587 (64%), Gaps = 15/587 (3%)
Strand=Plus/Plus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || || |||||| || || || ||||| | || || || |||||||||||
Sbjct 141794 AGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTC 141853
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
| || ||||| || || || |||||||| || | ||||| | || || |||
Sbjct 141854 AGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAG 141913
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| |||||||| || | |||||||| | | || | || | || | || || |
Sbjct 141914 AAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCG 141973
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
|||||| ||| | |||| ||||| || | || || || || || |||||
Sbjct 141974 GCAATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCG 142033
Query 16439 TTAAACA-ATTTCT-CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496
||||| | || | | | | | | | | || || ||||||||||| | ||
Sbjct 142034 TTAAAGAGATAAGTGCGCTGGGCGGGCT--CCTTGATGTAAGTATCAATCAGCAGGGAGT 142091
Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556
| | || ||||| |||||||| || ||||| || || |||||||| |||||||| |
Sbjct 142092 AGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGG 142151
Query 16557 CTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616
| || || || || |||| || || | |||||||| ||||| || || ||| |
Sbjct 142152 GAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAG 142211
Query 16617 CAGCAAAAAACGCCAATATGTG---CTTAATGAAAT----ATTTTTCGTCAGATGTAAGA 16669
||||||| || || | ||||| ||| ||| | || || ||| | |
Sbjct 142212 CAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCA----TGCGG 142267
Query 16670 ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCC 16729
| | ||| || | | ||| || || | ||| | || || | ||||| || ||||
Sbjct 142268 TTGTTCCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCC 142327
Query 16730 ACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
| ||||| || ||||| | |||||| |||| ||| | ||||| ||
Sbjct 142328 TCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAA 142374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410283114080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |