Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq116 338 6e-88
seq46 226 3e-54
seq13 107 2e-18
seq157 91.5 1e-13
>seq116
Length=85249
Score = 338 bits (374), Expect = 6e-88
Identities = 1219/1886 (65%), Gaps = 34/1886 (2%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || |||||||| || | || || | || || || ||||||||||||||
Sbjct 70115 CTGGTCAACAGTAAACTGAATAGGAGCAGCAGCAGCTTGAGTACGGAGATAATACATGCC 70056
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT--CCATAACTC 22222
||||| ||||||| ||||||| || || || || || ||| || |||| |
Sbjct 70055 GGTCTTAAGACCCAGCTTCCACCCGGTGAAGTGCATGCTGGT-AATCTTGCCCATGG-TG 69998
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| | ||||| | ||| | |||||| |||||||| || || || ||||||||
Sbjct 69997 GGGTCCTTCATGTGGATATTAAGGGACTGAGATTGATCGATGAAAGCACCACGATCGGCA 69938
Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
||||| | | | |||||| || |||||||| || ||||||||||| | ||||
Sbjct 69937 GCCATCTGAACAACGGTACGCTGAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGATA 69878
Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
|| || || ||| | || | ||| ||||| | | ||||| || ||
Sbjct 69877 TCAGCAGGAATACTGGGGATGTTTTGAATGGAACCGTTGTCGGCAATGATACGGTTCTTC 69818
Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTCACCAC 22461
|| |||| ||||| || | | || || ||| || || | |||| || || ||
Sbjct 69817 ATGTTATCAGACCACAGGCCAAGGTCGACCAGATCGCGGAGCA-ACCACGGGTTAACAAC 69759
Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521
|| ||||| || | || ||| ||||| ||||| |||||||| ||| | |||||||| |
Sbjct 69758 CTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCA 69699
Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581
|| ||||| ||||| ||||| | || ||||||||||| || || | || || ||
Sbjct 69698 CTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGA 69639
Query 22582 GTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639
||| | | |||| || |||| | | || ||| | | ||||||||| || ||
Sbjct 69638 GTTGCGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAA--GTCCAGTCCCAAAGGTCA 69581
Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGC 22697
|| || || |||||||||||| | || | | || | | || || || ||
Sbjct 69580 CTGGGGGTGAC---GTCCCACATATCAAACTGGAGGATACCCTGGGAGACG--GGAGAGC 69526
Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757
| ||||| ||| ||||| ||| | || | | ||||| |||||||| |||
Sbjct 69525 CCTCGTAGGTTGAGTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGG 69466
Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTAC 22816
||| || || ||||| ||||| | ||||||||| |||| || | | || |
Sbjct 69465 CGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATT-GGCGAGCTTCAGCTGACTCAAAG 69407
Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876
||||| |||| | ||| || || || | ||||||||| || | ||| || || |||
Sbjct 69406 GGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGG 69347
Query 22877 TTTTTCAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934
| || || | || | |||||||| | || || || || || | |
Sbjct 69346 TGGCGCATGTT--GCTGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGC 69289
Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994
||||||||| | |||| || || | | |||||||| |
Sbjct 69288 GGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAG- 69230
Query 22995 CCGAT--TGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACC 23050
| | |||| |||||||| | || || | |||||||| ||||| || || |||
Sbjct 69229 TTGTTGGTGTAGTCAACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACC 69170
Query 23051 TCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCC 23110
|| || | ||||| | ||| || || || || ||| | || || |||
Sbjct 69169 TCATCAGGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCC 69110
Query 23111 AAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCC 23170
| ||| |||||||||| || || ||||| |||||||| | |||| | || | ||
Sbjct 69109 AGATTCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCG 69050
Query 23171 GTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACG 23230
|||||| || | ||| | || || ||| | ||||||| | || || |||
Sbjct 69049 GTCTCGGTTTGGGCCTCCAGAATGGCATACCAGAGCTTCTGAGCCTTAA-TGGTTAGACG 68991
Query 23231 TAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTC 23289
| | || || | || ||||| | ||||| || || ||||| | ||||| |||||
Sbjct 68990 GCCACGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTC 68931
Query 23290 GGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA--CATTGAGTCATTTTCAACG 23347
|||||||| || | | | || ||||| ||| |||| || | || || ||||
Sbjct 68930 AGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCA-CCATTC-TTCTCAATA 68873
Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407
|| |||| || ||||| || ||||| ||||| |||||| || |||||||| ||||||
Sbjct 68872 CGCTTCATGAACAGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCC 68813
Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467
|| |||||| ||||| | ||| | || || || ||||| |||||||| |||||
Sbjct 68812 TCCTTGCCGTGATTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCA 68753
Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527
|| |||| ||||| || || || | ||| ||||| ||||| || || |||||||| |||
Sbjct 68752 AGATAAATAGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTG 68693
Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA 23587
|||||| | || | ||||| || |||| |||||| || | ||| || || |
Sbjct 68692 TTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATG 68633
Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647
|| || | || || | |||||||| || || || || || || || ||
Sbjct 68632 TAAGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAA 68573
Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707
||||| || || |||| || || ||||| ||||| |||||||| || || | |
Sbjct 68572 ATCATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCA 68513
Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767
|||| ||| |||||||| | ||||| | ||| ||| | || |||||| || |||
Sbjct 68512 ACCAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGAT 68453
Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827
|| || || ||| | | ||||| || ||||| || || | | || | |
Sbjct 68452 GCATGAGTGAAGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTG 68393
Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887
|| || | || | || || ||||| ||||||| || || | ||| || | |
Sbjct 68392 TCACCCCAAACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTG 68333
Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947
|| | || || | ||||| ||||| | || || || || ||||| || | ||||||
Sbjct 68332 CCATCAAGCTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTG 68273
Query 23948 AAGTCACGATCGTGCACTATGGCCGA 23973
|| ||||| || | ||| || || ||
Sbjct 68272 AAATCACGGTCATACACAATCGCAGA 68247
>seq46
Length=146035
Score = 226 bits (250), Expect = 3e-54
Identities = 505/743 (68%), Gaps = 25/743 (3%)
Strand=Plus/Minus
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| ||||| || || ||||| ||||| | || || | ||
Sbjct 142356 GAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCGTTCTGGACTGCTGAGGAGATTGAT 142297
Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATCTGA-GAGAAATT--TTA 57681
|||||||||||||| ||| ||| | || || || || || ||| | || |||
Sbjct 142296 CTGTCTAAGGATCTTCACGACTGGAACAACCGCATGAACAAG--GATGAGCAGTTCTTTA 142239
Query 57682 TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCG 57741
| ||| | | || || || || || || ||||| ||||| |||||||| | || |
Sbjct 142238 TCTCTCACATTCTCGCTTTCTTTGCTGCTTCTGATGGCATTGTGAACGAGAACCTTGTTG 142179
Query 57742 AAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
| | ||||| || || || || | ||||| | ||||| ||||| || || |
Sbjct 142178 AGCGCTTTTCCGCTGAGGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCA 142119
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACA 57861
|| || ||| | || || || | || || || || || ||||| ||| | |||||
Sbjct 142118 TGATGGAGAACATTCACTCTGAGACCTACTCCCTGCTGATTGATACTTACATCAAGGAGC 142059
Query 57862 ACGACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAA 57919
|| | || || || || || ||||| || || || || ||| || ||||| ||
Sbjct 142058 CCGCCCAGCGCACTTAT-CTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGC-AA 142001
Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCT 57976
||| || ||| | | || ||||| || || || |||| || || || | ||
Sbjct 142000 GGCCGATTGGGCCCTGAAGTGGATTGC---CGACAAGGAATCCACCTTTGCTCAGCGCCT 141944
Query 57977 AATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTG 58036
| || || || |||||||| ||||| ||||| || || |||||| | || || ||
Sbjct 141943 CGTTGCTTTTGCGGCCGTCGAGGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTG 141884
Query 58037 GATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGA 58096
| || || || || || ||||| |||||||| ||| ||| ||| |||| || || ||
Sbjct 141883 GTTGCGCAAGCGTGGTCTCATGCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGA 141824
Query 58097 CGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC 58156
||||||||| || || || ||||| ||||| ||||||||||| |||| ||||| |
Sbjct 141823 CGAGGGTCTTCACACCGACTTTGCCTGCCTCTTGTACTCTCAC---CTCAA-CAACCGCC 141768
Query 58157 ---GC-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTG 58212
|| | | | ||| ||| || |||||||| || ||||| || || || |||||
Sbjct 141767 CTAGCAAGCAACTGATCCAGGAAATCATCACCGATGCTGTCGCTATTGAGAAGGAGTTCC 141708
Query 58213 TCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACA 58272
| ||||| ||||| || ||| | |||||||||||| ||| | ||| | |||||
Sbjct 141707 TTACCGAGGCCCTGCCCTGTGCCCTTCTCGGTATGAACGCTGACCTCATGAAGACGTACA 141648
Query 58273 TTGAGTTTGTTGCCGACAGACTT 58295
| ||||| ||||||||| | |||
Sbjct 141647 TCGAGTTCGTTGCCGACCGTCTT 141625
>seq13
Length=240985
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||||||||| || || || || ||| | || ||||| | |||
Sbjct 37963 ATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATTACCTTGGAGGTTGAGTCTTCC 38022
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 38023 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 38082
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || ||||| ||| | || || || | |||||| |||
Sbjct 38083 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCCGATTACAAC 38142
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || ||||| ||||| || || || ||| | || | || ||||
Sbjct 38143 ATCCAGAAGGAATCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGGTA 38191
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| |||| ||||| | ||||||| | |||| | |||||
Sbjct 37759 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAACGTCAAGTCC 37818
Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336
| || ||||||||| ||| | || || ||||||||||| || ||||| ||||| ||
Sbjct 37819 AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTGATATTTGCTGGAAAG 37878
Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396
||| | || || | ||| || ||| || |||||||| || || || ||||| ||
Sbjct 37879 CAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCCACTCTCCAC 37938
Query 31397 CTGGTACT 31404
||||| ||
Sbjct 37939 CTGGTCCT 37946
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || || || || | || ||||| | ||
Sbjct 38419 ATGCAGATTTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTTGAAGTTGAGTCTTCT 38478
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 38479 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 38538
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || ||||| || ||| | || || | ||| || ||| || |||
Sbjct 38539 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAAC 38598
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || ||||| ||||| || |||| |||
Sbjct 38599 ATTCAGAAGGAATCCACTCTCCACTTGGTTCTT 38631
>seq157
Length=65766
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||| ||| |||| ||||| |
Sbjct 44948 AAGATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 45007
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| | || ||| ||||| ||| | || || ||
Sbjct 45008 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 45067
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||||||||| || || |||||||| ||| |||| ||
Sbjct 45068 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGA 45105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762811580480
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