Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq116 338 6e-88 seq46 226 3e-54 seq13 107 2e-18 seq157 91.5 1e-13 >seq116 Length=85249 Score = 338 bits (374), Expect = 6e-88 Identities = 1219/1886 (65%), Gaps = 34/1886 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || |||||||| || | || || | || || || |||||||||||||| Sbjct 70115 CTGGTCAACAGTAAACTGAATAGGAGCAGCAGCAGCTTGAGTACGGAGATAATACATGCC 70056 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT--CCATAACTC 22222 ||||| ||||||| ||||||| || || || || || ||| || |||| | Sbjct 70055 GGTCTTAAGACCCAGCTTCCACCCGGTGAAGTGCATGCTGGT-AATCTTGCCCATGG-TG 69998 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || | ||||| | ||| | |||||| |||||||| || || || |||||||| Sbjct 69997 GGGTCCTTCATGTGGATATTAAGGGACTGAGATTGATCGATGAAAGCACCACGATCGGCA 69938 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| | | | |||||| || |||||||| || ||||||||||| | |||| Sbjct 69937 GCCATCTGAACAACGGTACGCTGAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGATA 69878 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 || || || ||| | || | ||| ||||| | | ||||| || || Sbjct 69877 TCAGCAGGAATACTGGGGATGTTTTGAATGGAACCGTTGTCGGCAATGATACGGTTCTTC 69818 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTCACCAC 22461 || |||| ||||| || | | || || ||| || || | |||| || || || Sbjct 69817 ATGTTATCAGACCACAGGCCAAGGTCGACCAGATCGCGGAGCA-ACCACGGGTTAACAAC 69759 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 || ||||| || | || ||| ||||| ||||| |||||||| ||| | |||||||| | Sbjct 69758 CTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCA 69699 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 || ||||| ||||| ||||| | || ||||||||||| || || | || || || Sbjct 69698 CTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGA 69639 Query 22582 GTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 ||| | | |||| || |||| | | || ||| | | ||||||||| || || Sbjct 69638 GTTGCGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAA--GTCCAGTCCCAAAGGTCA 69581 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGC 22697 || || || |||||||||||| | || | | || | | || || || || Sbjct 69580 CTGGGGGTGAC---GTCCCACATATCAAACTGGAGGATACCCTGGGAGACG--GGAGAGC 69526 Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757 | ||||| ||| ||||| ||| | || | | ||||| |||||||| ||| Sbjct 69525 CCTCGTAGGTTGAGTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGG 69466 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTAC 22816 ||| || || ||||| ||||| | ||||||||| |||| || | | || | Sbjct 69465 CGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATT-GGCGAGCTTCAGCTGACTCAAAG 69407 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 ||||| |||| | ||| || || || | ||||||||| || | ||| || || ||| Sbjct 69406 GGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGG 69347 Query 22877 TTTTTCAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934 | || || | || | |||||||| | || || || || || | | Sbjct 69346 TGGCGCATGTT--GCTGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGC 69289 Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994 ||||||||| | |||| || || | | |||||||| | Sbjct 69288 GGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAG- 69230 Query 22995 CCGAT--TGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACC 23050 | | |||| |||||||| | || || | |||||||| ||||| || || ||| Sbjct 69229 TTGTTGGTGTAGTCAACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACC 69170 Query 23051 TCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCC 23110 || || | ||||| | ||| || || || || ||| | || || ||| Sbjct 69169 TCATCAGGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCC 69110 Query 23111 AAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCC 23170 | ||| |||||||||| || || ||||| |||||||| | |||| | || | || Sbjct 69109 AGATTCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCG 69050 Query 23171 GTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACG 23230 |||||| || | ||| | || || ||| | ||||||| | || || ||| Sbjct 69049 GTCTCGGTTTGGGCCTCCAGAATGGCATACCAGAGCTTCTGAGCCTTAA-TGGTTAGACG 68991 Query 23231 TAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTC 23289 | | || || | || ||||| | ||||| || || ||||| | ||||| ||||| Sbjct 68990 GCCACGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTC 68931 Query 23290 GGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA--CATTGAGTCATTTTCAACG 23347 |||||||| || | | | || ||||| ||| |||| || | || || |||| Sbjct 68930 AGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCA-CCATTC-TTCTCAATA 68873 Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407 || |||| || ||||| || ||||| ||||| |||||| || |||||||| |||||| Sbjct 68872 CGCTTCATGAACAGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCC 68813 Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467 || |||||| ||||| | ||| | || || || ||||| |||||||| ||||| Sbjct 68812 TCCTTGCCGTGATTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCA 68753 Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 || |||| ||||| || || || | ||| ||||| ||||| || || |||||||| ||| Sbjct 68752 AGATAAATAGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTG 68693 Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA 23587 |||||| | || | ||||| || |||| |||||| || | ||| || || | Sbjct 68692 TTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATG 68633 Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 || || | || || | |||||||| || || || || || || || || Sbjct 68632 TAAGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAA 68573 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 ||||| || || |||| || || ||||| ||||| |||||||| || || | | Sbjct 68572 ATCATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCA 68513 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 |||| ||| |||||||| | ||||| | ||| ||| | || |||||| || ||| Sbjct 68512 ACCAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGAT 68453 Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827 || || || ||| | | ||||| || ||||| || || | | || | | Sbjct 68452 GCATGAGTGAAGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTG 68393 Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887 || || | || | || || ||||| ||||||| || || | ||| || | | Sbjct 68392 TCACCCCAAACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTG 68333 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 || | || || | ||||| ||||| | || || || || ||||| || | |||||| Sbjct 68332 CCATCAAGCTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTG 68273 Query 23948 AAGTCACGATCGTGCACTATGGCCGA 23973 || ||||| || | ||| || || || Sbjct 68272 AAATCACGGTCATACACAATCGCAGA 68247 >seq46 Length=146035 Score = 226 bits (250), Expect = 3e-54 Identities = 505/743 (68%), Gaps = 25/743 (3%) Strand=Plus/Minus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||| | |||||||| ||||| || || ||||| ||||| | || || | || Sbjct 142356 GAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCGTTCTGGACTGCTGAGGAGATTGAT 142297 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATCTGA-GAGAAATT--TTA 57681 |||||||||||||| ||| ||| | || || || || || ||| | || ||| Sbjct 142296 CTGTCTAAGGATCTTCACGACTGGAACAACCGCATGAACAAG--GATGAGCAGTTCTTTA 142239 Query 57682 TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCG 57741 | ||| | | || || || || || || ||||| ||||| |||||||| | || | Sbjct 142238 TCTCTCACATTCTCGCTTTCTTTGCTGCTTCTGATGGCATTGTGAACGAGAACCTTGTTG 142179 Query 57742 AAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801 | | ||||| || || || || | ||||| | ||||| ||||| || || | Sbjct 142178 AGCGCTTTTCCGCTGAGGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCA 142119 Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACA 57861 || || ||| | || || || | || || || || || ||||| ||| | ||||| Sbjct 142118 TGATGGAGAACATTCACTCTGAGACCTACTCCCTGCTGATTGATACTTACATCAAGGAGC 142059 Query 57862 ACGACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAA 57919 || | || || || || || ||||| || || || || ||| || ||||| || Sbjct 142058 CCGCCCAGCGCACTTAT-CTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGC-AA 142001 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCT 57976 ||| || ||| | | || ||||| || || || |||| || || || | || Sbjct 142000 GGCCGATTGGGCCCTGAAGTGGATTGC---CGACAAGGAATCCACCTTTGCTCAGCGCCT 141944 Query 57977 AATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTG 58036 | || || || |||||||| ||||| ||||| || || |||||| | || || || Sbjct 141943 CGTTGCTTTTGCGGCCGTCGAGGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTG 141884 Query 58037 GATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGA 58096 | || || || || || ||||| |||||||| ||| ||| ||| |||| || || || Sbjct 141883 GTTGCGCAAGCGTGGTCTCATGCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGA 141824 Query 58097 CGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC 58156 ||||||||| || || || ||||| ||||| ||||||||||| |||| ||||| | Sbjct 141823 CGAGGGTCTTCACACCGACTTTGCCTGCCTCTTGTACTCTCAC---CTCAA-CAACCGCC 141768 Query 58157 ---GC-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTG 58212 || | | | ||| ||| || |||||||| || ||||| || || || ||||| Sbjct 141767 CTAGCAAGCAACTGATCCAGGAAATCATCACCGATGCTGTCGCTATTGAGAAGGAGTTCC 141708 Query 58213 TCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACA 58272 | ||||| ||||| || ||| | |||||||||||| ||| | ||| | ||||| Sbjct 141707 TTACCGAGGCCCTGCCCTGTGCCCTTCTCGGTATGAACGCTGACCTCATGAAGACGTACA 141648 Query 58273 TTGAGTTTGTTGCCGACAGACTT 58295 | ||||| ||||||||| | ||| Sbjct 141647 TCGAGTTCGTTGCCGACCGTCTT 141625 >seq13 Length=240985 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||||||||| || || || || ||| | || ||||| | ||| Sbjct 37963 ATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATTACCTTGGAGGTTGAGTCTTCC 38022 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 38023 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 38082 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | || || || | |||||| ||| Sbjct 38083 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCCGATTACAAC 38142 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| || || || ||| | || | || |||| Sbjct 38143 ATCCAGAAGGAATCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGGTA 38191 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || |||||| |||| ||||| | ||||||| | |||| | ||||| Sbjct 37759 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAACGTCAAGTCC 37818 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||| ||| | || || ||||||||||| || ||||| ||||| || Sbjct 37819 AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTGATATTTGCTGGAAAG 37878 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | || || | ||| || ||| || |||||||| || || || ||||| || Sbjct 37879 CAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCCACTCTCCAC 37938 Query 31397 CTGGTACT 31404 ||||| || Sbjct 37939 CTGGTCCT 37946 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || || || || | || ||||| | || Sbjct 38419 ATGCAGATTTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTTGAAGTTGAGTCTTCT 38478 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || ||||||||| ||| | || || |||||| Sbjct 38479 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 38538 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| | || || | ||| || ||| || ||| Sbjct 38539 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAAC 38598 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || ||||| ||||| || |||| ||| Sbjct 38599 ATTCAGAAGGAATCCACTCTCCACTTGGTTCTT 38631 >seq157 Length=65766 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||| ||| |||| ||||| | Sbjct 44948 AAGATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 45007 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | || ||| ||||| ||| | || || || Sbjct 45008 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 45067 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| || || |||||||| ||| |||| || Sbjct 45068 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGA 45105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762811580480