Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq116 114 3e-20 >seq116 Length=85249 Score = 114 bits (126), Expect = 3e-20 Identities = 421/654 (64%), Gaps = 38/654 (6%) Strand=Plus/Minus Query 94408 TCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCAC 94467 ||||| |||||||||| |||| || || ||||| | | ||| | |||||||||||| Sbjct 68974 TCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCAC 68915 Query 94468 TCGTGGGGGCACATCAGGGACCA------ATTCTTCCCAGCCTTCACTCTCTCCATGAAG 94521 |||| |||||||||||| | ||| ||||||| || | | || |||||| Sbjct 68914 TCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCA------ATACGCTTCATGAAC 68861 Query 94522 AGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTACCGGCA 94581 ||||||| | ||| | ||| |||| ||||| | | | | || || || ||| | Sbjct 68860 AGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGA 68801 Query 94582 TTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAATATAGATGGCT 94641 ||||| | | || | || || ||||| ||||||| || ||| || || Sbjct 68800 TTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCA 68741 Query 94642 GCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGTTAAAGATT 94701 ||| || | ||||| || |||||| ||| | ||| | ||| |||| Sbjct 68740 AAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACA 68681 Query 94702 TGGAG-----GAACG---CCATGAGACC-AGGGTGGGTACCACTCCATGACGAAATGGGG 94752 |||| ||||| || | ||| | || ||||||| || | || | Sbjct 68680 CGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGC----GATGTAAGAG-- 68627 Query 94753 CTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATG 94812 || | || | | | |||| || || ||| | || || || ||||||| || Sbjct 68626 ---CCGGTAGCACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATC 68570 Query 94813 ATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAG 94871 || || | || | ||| |||||||| |||||||||||||| ||||| | | | | | Sbjct 68569 ATAGCACAAGTCTTCAAG-GTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAAC 68511 Query 94872 AAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGC 94931 ||||||||||| || || || | | || ||| ||| ||||| |||||||| || Sbjct 68510 CAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGC 68451 Query 94932 ATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGA---TGTC 94988 ||| || || | | || |||||||| | || || || | ||| | || |||| Sbjct 68450 ATGAGTGAAGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTC 68391 Query 94989 TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 || || ||| ||||| |||||||| ||||||| ||| ||||||||||| Sbjct 68390 ---ACCCCAAACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAAC 68340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989575834695020