Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq13 82.4 8e-11
>seq13
Length=240985
Score = 82.4 bits (90), Expect = 8e-11
Identities = 124/174 (71%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || |||||||| || ||| || |||| || || ||||| || |||
Sbjct 37931 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTTCCA 37872
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| | ||||| || ||||| || ||||| ||||| || ||||| ||| | || | ||
Sbjct 37871 GCAAATATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGACTT 37813
Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| | || | ||||||| || ||| ||||| | ||| | |||||||||||
Sbjct 37812 GACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 37759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496060006684800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |