Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq46 168 1e-36
seq116 145 1e-29
>seq46
Length=146035
Score = 168 bits (186), Expect = 1e-36
Identities = 386/580 (67%), Gaps = 6/580 (1%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||| ||||||||||| | | ||| || || |||||||| || ||
Sbjct 141797 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGG 141856
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || |||||||| | ||| || ||||| ||||| | || || ||||||
Sbjct 141857 CCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAG 141916
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136
|| || || || || ||||| ||||| || | || || | ||| | ||||
Sbjct 141917 ATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCGGCA 141976
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||||||| | |||||||||||||| | || || || || || ||||| |||
Sbjct 141977 ATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTA 142036
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
|||||||| | | || || | |||||||| |||| || || |
Sbjct 142037 AAGAGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTC 142096
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| || |||||||| || || ||||| || |||||||| || | |||||||| || |
Sbjct 142097 TCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACC 142156
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | |||| || ||| | | || || ||||| || || ||| || |||
Sbjct 142157 TGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCA 142216
Query 50377 AAAAACGCCAATACATGTTTTATA---AAATGTTTTTCGTTGGGTGTTAGTTTATTCCAA 50433
|| || || | | || ||| || || | || ||| | | || |||||
Sbjct 142217 AAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCAG 142276
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | | ||| ||||| | ||| | || || | ||||| || || ||||| |||||
Sbjct 142277 TCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCCTCGGCCTTC 142336
Query 50494 TTATACATATTCCAGATGTCATGATATTGGATTGGGAAAA 50533
|| ||||| | ||| || ||||| || | ||| |||||||
Sbjct 142337 TTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAAAA 142376
>seq116
Length=85249
Score = 145 bits (160), Expect = 1e-29
Identities = 397/603 (66%), Gaps = 24/603 (4%)
Strand=Plus/Minus
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950
||||| || |||| || ||||||| | ||| || |||| | || | || |||||
Sbjct 68923 CCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATG 68864
Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010
|| |||||||| ||||| ||||| | || ||||| | || | | |||||| || ||
Sbjct 68863 AACAGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCG 68804
Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070
|||||| |||||||||||| | | | || | |||||| || || | || ||
Sbjct 68803 TGATTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATA 68744
Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130
|| | | | || || || ||||| || ||||| || | || | || ||||| || |
Sbjct 68743 GCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAG 68684
Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190
|| | | ||| |||| ||||| || || ||||| ||||| || | ||| || ||
Sbjct 68683 ACACGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCG 68624
Query 80191 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248
| ||||| ||| || ||| || || || || || ||||| || || || | |
Sbjct 68623 GTAGCACGGATACGGTGAACGTTG--AGGCCAATACCACCCGCCATCTTGGAAATCATAG 68566
Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308
| || || || ||||||||||| ||||| ||||| ||||| |||||| || || |
Sbjct 68565 CACAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGA 68506
Query 80309 AACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364
| || ||| | || || || ||| || ||||| || | || || || ||
Sbjct 68505 AGCACGAAGAGAGCTG----CGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCA 68450
Query 80365 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA----GCT-GATTCTAT-A 80418
|| || || | || ||||| || ||||| ||||| | | ||| || | | |
Sbjct 68449 TGAGTGAAGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCA 68390
Query 80419 TCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 80478
|||| || || || || |||||||| | ||||||||| || | ||||| |||
Sbjct 68389 CCCCA------AACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATC 68336
Query 80479 TTG 80481
|||
Sbjct 68335 TTG 68333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718263017936160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |