Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq53 178 2e-40 seq84 98.7 2e-16 >seq53 Length=136082 Score = 178 bits (196), Expect = 2e-40 Identities = 204/272 (75%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || || ||||| || || || || ||||| |||| Sbjct 30589 CGCCAAGCGTCACCGCAAGAT-TCTCCGTGACAACATTCAGGGTATTACTAAGCCCGCTA 30531 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| | |||| || |||| || |||| Sbjct 30530 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGA 30471 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| |||| | ||| ||||||| || || |||| |||||| || ||| || | Sbjct 30470 CCCGTGGTGTTCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACTG 30411 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || | ||||| || | || | |||| Sbjct 30410 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGAGACAAG 30351 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 |||| | | || ||||| || ||||| || Sbjct 30350 GCCGCACTCTGTACGGTTTCGGTGGTTAAACT 30319 >seq84 Length=108241 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || ||||| || || ||||||||||| || || Sbjct 37022 GCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATTCAGGGTATCACCAAGCCCGCCAT 36964 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||| ||||| |||||||| ||||||||| | |||| Sbjct 36963 TCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATTTCTG 36923 Score = 80.6 bits (88), Expect = 4e-11 Identities = 116/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| |||| | ||| ||||| || || || | ||||| Sbjct 36852 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGTCGTTCCTTGAGGGTGTCATTCGTGATG 36793 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| |||||||| | ||| | ||||| | Sbjct 36792 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGATGTTGTCTACG 36733 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || || || ||||||| | || ||||| || ||||| Sbjct 36732 CTCTTAAGCGCCAGGGCCGTACTCTGTACGGTTTCGGTGGTTAA 36689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074611186292