Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq116 421 2e-112
seq198 84.2 6e-11
>seq116
Length=85249
Score = 421 bits (466), Expect = 2e-112
Identities = 1161/1756 (66%), Gaps = 60/1756 (3%)
Strand=Plus/Plus
Query 363434 ATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATT 363493
|||| | |||||||| ||||| ||||| ||| | |||||||||||| |||| | ||
Sbjct 68329 ATGGCAAGATTGTTGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCGT---TT 68385
Query 363494 GCCCGGATGTTGATGCCGCGATTG------AAACATATAAGCT----TCTAAGTGCTCGT 363543
| || || ||| || | || | || || || || |||| || ||
Sbjct 68386 G---GGGTGACAATGTCGAGCGTGTTCTGGAGACTTACAACCTCATGTCTA---GCAAGT 68439
Query 363544 GTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCT 363603
| ||||| || || | || || ||| ||||||||| |||| | | ||| | |||
Sbjct 68440 -TCTTCACTCATGCATCCCCCACTCTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCT 68498
Query 363604 TCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAG 363663
|| ||||| || | | |||||||| || ||| |||||||||| ||| || | |||
Sbjct 68499 TCGTGCTTCCTGGTTGACATGAAGGATGACAGCATTGAGGGTATCTATGATACCTTGAAG 68558
Query 363664 AATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCG 363722
| ||||||| | |||||||||| || || || ||||| | | || || || | | ||
Sbjct 68559 ACTTGTGCTATGATTTCCAAGATGGCGGGTGGTATTGGCCTCAACGTTC-ACCGTATCCG 68617
Query 363723 TGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCAT 363779
||| || | | |||||| ||| || || || |||| | || || | ||||||||
Sbjct 68618 TGCTACCGG-CTCTTACAT-CGCTGGTACCAACGG-TACTTCTAACGGTATCGTTCCCAT 68674
Query 363780 GCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839
||| ||||| || |||| ||||| | || || ||||||||||| ||||| ||
Sbjct 68675 GCTCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGGCAACAAGCGTCCCGG 68734
Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899
|| |||||||| ||||| |||||| ||||| || | |||||||| || || |||||
Sbjct 68735 TGCTTTTGCTATTTATCTTGAGCCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCG 68794
Query 363900 GAAAAA-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|| || ||||| || ||||| | || || |||||||||||| ||| || ||| |
Sbjct 68795 CAAGAATCACGGCAAG-GAGGAGGTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCC 68853
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTG-GTC---ACTCT--TTTGCC 364012
|||| | || |||||||| | ||| |||||| | | | ||||| | ||||
Sbjct 68854 CTGATCTGTTCATGAAGCGTATTGAG------AAGAATGGTGACTGGACTCTGATGTGCC 68907
Query 364013 CACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAA 364072
| |||| || || || || | || | || || || | | ||||| ||||| |
Sbjct 68908 CCAACGAGTGCCCTGGCCTGGCTGACTGCTACGGCGATGAATTCGAGGCTCTGTACGAGA 68967
Query 364073 AGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCA 364132
|||||||| |||||| | ||| || ||| || |||||||| |||| |||||
Sbjct 68968 AGTATGAAAAGGAGGGTCGTGGCCGTCTAACCATTAAGGCTCAGAAGCTCTGGTATGCCA 69027
Query 364133 TCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACC 364192
| |||| | || | ||||| |||| |||| ||||||||||| || |||||||
Sbjct 69028 TTCTGGAGGCCCAAACCGAGACCGGAAACCCCTTCATGTTGTACAAGGACCATTGCAACC 69087
Query 364193 GCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATT 364251
| ||| ||||||| || | || ||||| | || |||| |||||| || || ||||||
Sbjct 69088 GGAAGAGCAACCAGAAGAATCTGGGTACCA-TCCGCAGCTCCAACCTGTGCACTGAGATT 69146
Query 364252 ATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311
|| || || ||||| || ||| ||| || || |||||||| || | || || ||
Sbjct 69147 ATCGAGTATTGTGCTCCTGATGAGGTTGCTGTTTGCAACCTTGCCTCCTTGGCTCTCCCC 69206
Query 364312 GCGTTTGT----------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC 364361
|||||||| || | | ||| ||| |||| | || | || || ||
Sbjct 69207 GCGTTTGTTGACTACACCAACAACTCATAC----GACTTCCAGAAGCTGCACGAGGTCAC 69262
Query 364362 CTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA 364421
| | || | | |||| | || | || ||| || | || || |||| ||
Sbjct 69263 CAAGGTTGTTGTTCGCAACTTGAACCGCATCATTGACGTCAACCACTACCCCGTTCCCGA 69322
Query 364422 AGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481
|| | || ||||| || || || |||||| | ||||| ||||| || |||||
Sbjct 69323 GGCTTACAACAGCAACATGCGCCACCGTCCCATTGGTGTGGGTGTTCAGGGTCTTGCTGA 69382
Query 364482 CGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGA 364541
| || | || ||| | ||||| || |||| ||||| | || | |
Sbjct 69383 TGCCTTCCTAGCTCTGCGCATGCCCTTTGAGTCAGCTGAAGCTCGCCAATTGAACACTCA 69442
Query 364542 GATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAA 364601
||||||||| || || || ||||| || || || || || | | ||| |
Sbjct 69443 GATCTTTGAGACCATTTACCACGCCGCTCTGGAGGCGTCTTGCGAGATCTCTCAAATTGA 69502
Query 364602 GGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCT 364661
||| | |||||| || || ||||| || || | || ||||| | ||||||||||| |
Sbjct 69503 GGGTACGTACTCAACCTACGAGGGCTCTCCCGTCTCCCAGGGTATCCTCCAGTTTGATAT 69562
Query 364662 ATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGC-TACGTTCCAACGTTAAGA 364720
||| | ||||| || || || ||| ||||| | | | || | | | | ||||
Sbjct 69563 GTGGGACGTCACCCCCAGTGACCTTTGGGACTGGACTTCTCTTAAGGAGC-AGATCAAGA 69621
Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGA 364780
|| | ||| ||||||||| || | || |||||||| || || |||| | ||||
Sbjct 69622 AGAACGGTGTTCGCAACTCTCTTCTCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGA 69681
Query 364781 TCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTC 364840
| || || |||||||||||||||||||| | || ||| | || ||||| || |
Sbjct 69682 TTCTGGGCAACAACGAGTGCTTCGAACCATACACCTCCAACATCTACCAGCGCCGTGTCC 69741
Query 364841 TTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGC 364900
| | || || || | ||| ||||| || | || ||||| ||||| || |
Sbjct 69742 TGGCTGGTGAGTTCCAGGTTGTTAACCCGTGGTTGCTCCGCGATCTGGTCGACCTTGGCC 69801
Query 364901 TGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC 364960
||||| ||| | |||||||||| |||||| |||| || ||||| | || ||||| |
Sbjct 69802 TGTGGTCTGATAACATGAAGAACCGTATCATTGCCGACAACGGTTCCATTCAAAACATCC 69861
Query 364961 CAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAA 365020
| | |||| | ||| | ||| || | ||||| || || ||||||||||| ||| |
Sbjct 69862 CCAGTATTCCTGCTGATATCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCGTA 69921
Query 365021 CTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACG 365080
| | || | ||||| |||||||| |||||||| ||| ||| ||||| ||||
Sbjct 69922 CCGTTGTTCAGATGGCTGCCGATCGTGGTGCTTTCATCGATCAATCTCAGTCCCTTAATA 69981
Query 365081 TATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAAT 365140
| ||||| | || ||| | |||| |||| |||||| ||| |||||||||
Sbjct 69982 TCCACATGAAGGACCCCACCATGGGCAAGATTACCAGCATGCACTTCACCGGGTGGAAGC 70041
Query 365141 CCGGTCTTAAGACAGG 365156
||||||||||| ||
Sbjct 70042 TGGGTCTTAAGACCGG 70057
>seq198
Length=47150
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 65871 GTTACGAATCGTTCCGTCATAATT-GCACATATTATCTTCACTTGCCTTTACAAGACAAC 65929
|||||| | || || || || || |||| || ||||||| ||||| || |||| ||
Sbjct 26184 GTTACGGACAGTACCATCGTACTTCGCAC-TAACATCTTCAAGAGCCTTGACCAGACGAC 26126
Query 65930 GCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGG 65989
|||||||||||||| | | ||||| || || || ||||||| ||||||||||| || |
Sbjct 26125 GCTGGATGTAACCAGTCTCAGCAGTCTTGACAGCAGTATCAATAAGACCTTCACGACCAG 26066
Query 65990 ACATTGCAGAAAAGAAAAACTCA 66012
||| || ||||| || |||
Sbjct 26065 CCATGGCGTGGAAGAAGAATTCA 26043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303342845703608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |