Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq116 421 2e-112 seq198 84.2 6e-11 >seq116 Length=85249 Score = 421 bits (466), Expect = 2e-112 Identities = 1161/1756 (66%), Gaps = 60/1756 (3%) Strand=Plus/Plus Query 363434 ATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATT 363493 |||| | |||||||| ||||| ||||| ||| | |||||||||||| |||| | || Sbjct 68329 ATGGCAAGATTGTTGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCGT---TT 68385 Query 363494 GCCCGGATGTTGATGCCGCGATTG------AAACATATAAGCT----TCTAAGTGCTCGT 363543 | || || ||| || | || | || || || || |||| || || Sbjct 68386 G---GGGTGACAATGTCGAGCGTGTTCTGGAGACTTACAACCTCATGTCTA---GCAAGT 68439 Query 363544 GTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCT 363603 | ||||| || || | || || ||| ||||||||| |||| | | ||| | ||| Sbjct 68440 -TCTTCACTCATGCATCCCCCACTCTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCT 68498 Query 363604 TCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAG 363663 || ||||| || | | |||||||| || ||| |||||||||| ||| || | ||| Sbjct 68499 TCGTGCTTCCTGGTTGACATGAAGGATGACAGCATTGAGGGTATCTATGATACCTTGAAG 68558 Query 363664 AATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCG 363722 | ||||||| | |||||||||| || || || ||||| | | || || || | | || Sbjct 68559 ACTTGTGCTATGATTTCCAAGATGGCGGGTGGTATTGGCCTCAACGTTC-ACCGTATCCG 68617 Query 363723 TGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCAT 363779 ||| || | | |||||| ||| || || || |||| | || || | |||||||| Sbjct 68618 TGCTACCGG-CTCTTACAT-CGCTGGTACCAACGG-TACTTCTAACGGTATCGTTCCCAT 68674 Query 363780 GCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||| ||||| || |||| ||||| | || || ||||||||||| ||||| || Sbjct 68675 GCTCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGGCAACAAGCGTCCCGG 68734 Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899 || |||||||| ||||| |||||| ||||| || | |||||||| || || ||||| Sbjct 68735 TGCTTTTGCTATTTATCTTGAGCCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCG 68794 Query 363900 GAAAAA-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 || || ||||| || ||||| | || || |||||||||||| ||| || ||| | Sbjct 68795 CAAGAATCACGGCAAG-GAGGAGGTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCC 68853 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTG-GTC---ACTCT--TTTGCC 364012 |||| | || |||||||| | ||| |||||| | | | ||||| | |||| Sbjct 68854 CTGATCTGTTCATGAAGCGTATTGAG------AAGAATGGTGACTGGACTCTGATGTGCC 68907 Query 364013 CACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAA 364072 | |||| || || || || | || | || || || | | ||||| ||||| | Sbjct 68908 CCAACGAGTGCCCTGGCCTGGCTGACTGCTACGGCGATGAATTCGAGGCTCTGTACGAGA 68967 Query 364073 AGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCA 364132 |||||||| |||||| | ||| || ||| || |||||||| |||| ||||| Sbjct 68968 AGTATGAAAAGGAGGGTCGTGGCCGTCTAACCATTAAGGCTCAGAAGCTCTGGTATGCCA 69027 Query 364133 TCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACC 364192 | |||| | || | ||||| |||| |||| ||||||||||| || ||||||| Sbjct 69028 TTCTGGAGGCCCAAACCGAGACCGGAAACCCCTTCATGTTGTACAAGGACCATTGCAACC 69087 Query 364193 GCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATT 364251 | ||| ||||||| || | || ||||| | || |||| |||||| || || |||||| Sbjct 69088 GGAAGAGCAACCAGAAGAATCTGGGTACCA-TCCGCAGCTCCAACCTGTGCACTGAGATT 69146 Query 364252 ATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 || || || ||||| || ||| ||| || || |||||||| || | || || || Sbjct 69147 ATCGAGTATTGTGCTCCTGATGAGGTTGCTGTTTGCAACCTTGCCTCCTTGGCTCTCCCC 69206 Query 364312 GCGTTTGT----------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC 364361 |||||||| || | | ||| ||| |||| | || | || || || Sbjct 69207 GCGTTTGTTGACTACACCAACAACTCATAC----GACTTCCAGAAGCTGCACGAGGTCAC 69262 Query 364362 CTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA 364421 | | || | | |||| | || | || ||| || | || || |||| || Sbjct 69263 CAAGGTTGTTGTTCGCAACTTGAACCGCATCATTGACGTCAACCACTACCCCGTTCCCGA 69322 Query 364422 AGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481 || | || ||||| || || || |||||| | ||||| ||||| || ||||| Sbjct 69323 GGCTTACAACAGCAACATGCGCCACCGTCCCATTGGTGTGGGTGTTCAGGGTCTTGCTGA 69382 Query 364482 CGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGA 364541 | || | || ||| | ||||| || |||| ||||| | || | | Sbjct 69383 TGCCTTCCTAGCTCTGCGCATGCCCTTTGAGTCAGCTGAAGCTCGCCAATTGAACACTCA 69442 Query 364542 GATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAA 364601 ||||||||| || || || ||||| || || || || || | | ||| | Sbjct 69443 GATCTTTGAGACCATTTACCACGCCGCTCTGGAGGCGTCTTGCGAGATCTCTCAAATTGA 69502 Query 364602 GGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCT 364661 ||| | |||||| || || ||||| || || | || ||||| | ||||||||||| | Sbjct 69503 GGGTACGTACTCAACCTACGAGGGCTCTCCCGTCTCCCAGGGTATCCTCCAGTTTGATAT 69562 Query 364662 ATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGC-TACGTTCCAACGTTAAGA 364720 ||| | ||||| || || || ||| ||||| | | | || | | | | |||| Sbjct 69563 GTGGGACGTCACCCCCAGTGACCTTTGGGACTGGACTTCTCTTAAGGAGC-AGATCAAGA 69621 Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGA 364780 || | ||| ||||||||| || | || |||||||| || || |||| | |||| Sbjct 69622 AGAACGGTGTTCGCAACTCTCTTCTCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGA 69681 Query 364781 TCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTC 364840 | || || |||||||||||||||||||| | || ||| | || ||||| || | Sbjct 69682 TTCTGGGCAACAACGAGTGCTTCGAACCATACACCTCCAACATCTACCAGCGCCGTGTCC 69741 Query 364841 TTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGC 364900 | | || || || | ||| ||||| || | || ||||| ||||| || | Sbjct 69742 TGGCTGGTGAGTTCCAGGTTGTTAACCCGTGGTTGCTCCGCGATCTGGTCGACCTTGGCC 69801 Query 364901 TGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC 364960 ||||| ||| | |||||||||| |||||| |||| || ||||| | || ||||| | Sbjct 69802 TGTGGTCTGATAACATGAAGAACCGTATCATTGCCGACAACGGTTCCATTCAAAACATCC 69861 Query 364961 CAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAA 365020 | | |||| | ||| | ||| || | ||||| || || ||||||||||| ||| | Sbjct 69862 CCAGTATTCCTGCTGATATCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCGTA 69921 Query 365021 CTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACG 365080 | | || | ||||| |||||||| |||||||| ||| ||| ||||| |||| Sbjct 69922 CCGTTGTTCAGATGGCTGCCGATCGTGGTGCTTTCATCGATCAATCTCAGTCCCTTAATA 69981 Query 365081 TATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAAT 365140 | ||||| | || ||| | |||| |||| |||||| ||| ||||||||| Sbjct 69982 TCCACATGAAGGACCCCACCATGGGCAAGATTACCAGCATGCACTTCACCGGGTGGAAGC 70041 Query 365141 CCGGTCTTAAGACAGG 365156 ||||||||||| || Sbjct 70042 TGGGTCTTAAGACCGG 70057 >seq198 Length=47150 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 65871 GTTACGAATCGTTCCGTCATAATT-GCACATATTATCTTCACTTGCCTTTACAAGACAAC 65929 |||||| | || || || || || |||| || ||||||| ||||| || |||| || Sbjct 26184 GTTACGGACAGTACCATCGTACTTCGCAC-TAACATCTTCAAGAGCCTTGACCAGACGAC 26126 Query 65930 GCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGG 65989 |||||||||||||| | | ||||| || || || ||||||| ||||||||||| || | Sbjct 26125 GCTGGATGTAACCAGTCTCAGCAGTCTTGACAGCAGTATCAATAAGACCTTCACGACCAG 26066 Query 65990 ACATTGCAGAAAAGAAAAACTCA 66012 ||| || ||||| || ||| Sbjct 26065 CCATGGCGTGGAAGAAGAATTCA 26043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342845703608