Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq116 138 1e-27
seq13 125 7e-24
seq157 104 2e-17
seq3 98.7 9e-16
>seq116
Length=85249
Score = 138 bits (152), Expect = 1e-27
Identities = 291/434 (67%), Gaps = 0/434 (0%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| || ||||| ||||| || |||| ||||| ||| || | ||| || ||| | |||
Sbjct 69766 TTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGT 69707
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | || | ||||| |||||| || |
Sbjct 69706 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGG 69647
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | |||| ||||||||| | ||||| || | | ||| |||||
Sbjct 69646 AGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAA 69587
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| | | || | ||||||||||| || |||| | || |||| | | |||| |
Sbjct 69586 AGGTCACTGGGGGTGACGTCCCACATATCAAACTGGAGGATACCCTGGGAGACGGGAGAG 69527
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357
|| | ||| ||| | ||| | ||| | || ||||||| |||||||||||||
Sbjct 69526 CCCTCGTAGGTTGAGTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCG 69467
Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417
|| ||||| ||||| || || |||| | | |||||| | ||| |
Sbjct 69466 GCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAAG 69407
Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477
||||||||||| || || ||||| || || ||||| | ||||| || ||||| ||
Sbjct 69406 GGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGG 69347
Query 145478 TGTTTCATGTTGCT 145491
|| |||||||||
Sbjct 69346 TGGCGCATGTTGCT 69333
>seq13
Length=240985
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || || ||||| || ||||||||||||
Sbjct 38189 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGAA 38130
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| || |||| | |||||||||||||||||
Sbjct 38129 AGGGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 38070
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||| |||| ||||| |
Sbjct 38069 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 38010
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||| || || || ||||| || ||||||||||||||
Sbjct 38009 TCCAAGGTAATGGTCTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 37963
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || || || | || || ||||| ||||||||||| |||
Sbjct 38646 GCCACCACGGAGACGAAGAACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCGGA 38587
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| ||||| |||||||| || || |||| | |||||||||||||| ||
Sbjct 38586 CAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 38527
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || || ||||| | || | ||||| | ||||| |
Sbjct 38526 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCAGAAGACTCAAC 38467
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || || || || ||||||||||||||
Sbjct 38466 TTCAAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 38419
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || |||||||| ||||||||||| ||| |
Sbjct 37961 CCACCACGGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 37902
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || || | || | |||||||||||||||||
Sbjct 37901 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAATATCAGGCGCTGCTGGTCCGGAGGA 37842
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||| |||| |||||| |
Sbjct 37841 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACC 37782
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || |||||
Sbjct 37781 TCGAGGGTGATGGTCTTGCCGGT 37759
>seq157
Length=65766
Score = 104 bits (114), Expect = 2e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| || | |||||| ||||| ||||||||||| || |||
Sbjct 45140 CCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGA 45081
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||| ||||| || || || || || || ||| || ||||| | |
Sbjct 45080 TCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 45021
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||| | |||| ||||| || ||||| || || || || ||||
Sbjct 45020 CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTAACGA 44961
Query 131225 AAATCTGCAT 131234
||||||||||
Sbjct 44960 AAATCTGCAT 44951
>seq3
Length=407529
Score = 98.7 bits (108), Expect = 9e-16
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| || | ||||| ||||| |||||||||||
Sbjct 21562 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 21503
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| | |||||||||||||| || || || || || || ||| || ||||
Sbjct 21502 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTG 21443
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | ||||||| || | ||||| ||| ||||| || || ||
Sbjct 21442 ACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTC 21383
Query 131218 TTTACGAAAATCTGCATG 131235
|| |||||| |||||||
Sbjct 21382 TTGACGAAA--CTGCATG 21367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009000296960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |