Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq13 100 2e-16
>seq13
Length=240985
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||| ||||| || |||||||| |||| | ||| | | ||||| | ||
Sbjct 38165 TGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCATCCTCAAGCTGC 38106
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| ||| | || || ||||| |||||| ||| | |||||| ||||| || |
Sbjct 38105 TTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 38046
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | ||||||| | ||| |||| ||| ||||| ||||| |||
Sbjct 38045 GACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCCAAGGTAATGGTCTTTCCAGTC 37986
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| |||||||||||
Sbjct 37985 AGAGTCTTGACGAAAATCTGCAT 37963
Score = 82.4 bits (90), Expect = 6e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||||| || || | |||
Sbjct 37946 AGGACCAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCC 37887
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | || || ||||| |||||| ||| | |||||| |||||
Sbjct 37886 TCAAGCTGCTTTCCAGCAAATATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 37827
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | ||| || | | | | ||||||| || ||| || | |||||||||
Sbjct 37826 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTC 37767
Query 16904 TTTCCGGT 16911
|| |||||
Sbjct 37766 TTGCCGGT 37759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405084820565560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |