Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq46 170 2e-37 >seq46 Length=146035 Score = 170 bits (188), Expect = 2e-37 Identities = 408/615 (66%), Gaps = 9/615 (1%) Strand=Plus/Plus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| | ||| ||||||||||| || | ||| ||||| || || |||| ||||||| Sbjct 141787 GTACAAGAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGA 141846 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 || || | || || | || || || || | ||| || || || ||||| ||| Sbjct 141847 AAAAGTCAGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACC 141906 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || || || ||||| || ||||| ||||| || || | || | ||||| | ||| Sbjct 141907 GGAGAAGAAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGT---GGA 141963 Query 93262 ATTACTGCTG---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 | || | ||||| || | ||||||||||| || ||| || || | || Sbjct 141964 TTCCTTGTCGGCAATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGT 142023 Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 || || |||||||| || ||| |||| | | | || ||||| ||||| || | Sbjct 142024 GTCAATGGCGTTAAAGAGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAG 142083 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 ||| || || | ||||| || | |||||||| || ||||| |||||||| || | Sbjct 142084 CAGGGAGTAGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCG 142143 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 ||| || | | ||| || || ||||| | ||| || || || || || || || || Sbjct 142144 AGCCTCGGGAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCC 142203 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA- 93557 ||| || || ||||| ||||| | || || ||||| | |||||| | || | Sbjct 142204 ATCAGAAGCAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCAT 142263 Query 93558 --GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | || | ||| ||| ||||| || || ||||| | || || ||||||| ||||| Sbjct 142264 GCGGTTGTTCCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAACGA 142323 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 || || || || |||||||| | ||| || || || || | || || || | || || Sbjct 142324 AGCCTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAAAAGCACGAA 142383 Query 93676 ACGATTAGGGTTATC 93690 || |||||||| || Sbjct 142384 GCGGTTAGGGTTCTC 142398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856317270560