Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq46 183 6e-41 seq53 174 3e-38 seq13 167 4e-36 seq3 159 6e-34 seq157 114 2e-20 seq116 93.3 8e-14 >seq46 Length=146035 Score = 183 bits (202), Expect = 6e-41 Identities = 583/896 (65%), Gaps = 31/896 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 || ||| |||||||||||||| || || || |||||||||||||| |||||| | Sbjct 141493 CAGGACACCCGCCTTCTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 141552 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCC----AAACTGCTTGGGGT 10050 || |||||| |||||||||||| ||||||| | | ||| | || ||| || Sbjct 141553 AAGCGAAATGTTCTCCATGAAGTCGAAGGGGT--TGGAAGCCTTGTAGAC--CTTCTCGT 141608 Query 10051 AACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCG 10110 ||| || || || || ||||| || ||||||||||||||| |||| ||||| | Sbjct 141609 TACCAAGGGCAACGAGAAGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAG 141668 Query 10111 AGTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGA 10170 |||||| || | | | ||||| | ||| ||| || ||| ||||| || | |||| Sbjct 141669 CGTTCATACCGAGAAGGGCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGA 141728 Query 10171 CCGCTTCCTCGACGATGCTCTTTACCACGT-----CAAGGGACAGCTTGTTCTCGAGCTT 10225 | || || || ||| || | || | | |||| | ||||| ||| | Sbjct 141729 CAGCATCGGTGATGATTTCCTGGATCAGTTGCTTGCTAGGG--CGGTTGTT---GAGGTG 141783 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 || |||| ||| |||| | ||| || |||||||| || || | ||| || Sbjct 141784 AGAGTACAAGAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATT 141843 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 ||| ||| ||| || |||||||| || || ||||||| |||||| |||| | || | Sbjct 141844 GGAAAAAGTCAGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGC 141903 Query 10346 CCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCG 10405 |||||||| | | |||||| ||| | | | || |||||||||| || |||| | Sbjct 141904 ACCGGAGAAGAAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTGGA 141963 Query 10406 GTC---GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGG-ATCG 10461 || | | || | ||| |||||| | ||||| | | |||||| || | Sbjct 141964 TTCCTTGTCGGCAATCCACTTCAGGGCCCAATCGGCCTT-GCGGCGAATGCAGGGAATGG 142022 Query 10462 TCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGA 10521 | || || || | ||||| | | |||| || |||| || || ||||| | Sbjct 142023 TGTCAATGGCGTTAAAGAGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCA 142082 Query 10522 GCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATAC 10581 |||||||||| ||| ||| | | |||| | |||| || ||||||| | Sbjct 142083 GCAGGGAGTAGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGC 142142 Query 10582 GTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGC 10641 | ||| ||| || || || ||| |||| | |||||||| |||| |||| Sbjct 142143 GAGCCTCGGGAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGC 142202 Query 10642 CATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA 10701 |||| | |||||||| |||| ||||| ||| ||| ||||||| | ||||| Sbjct 142203 CATCAGAAGCAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCA 142262 Query 10702 ----GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAG 10757 ||| || |||||| | ||||| || | | |||||| | |||||| Sbjct 142263 TGCGGTTGTT----CCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAG 142318 Query 10758 AAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 || | || ||||||||||||||||||| |||| || ||||| ||||||||| Sbjct 142319 AACGAAGCCTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAA 142374 >seq53 Length=136082 Score = 174 bits (192), Expect = 3e-38 Identities = 675/1044 (65%), Gaps = 40/1044 (4%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| ||| ||| ||||||||||||| ||||| ||| |||||| Sbjct 112657 CGCCACTGGATGTACTCCGAGGGAGTCTTGTCCAGGTGGTTATCAATGTGGGCGAAAGCG 112716 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | ||| | || || Sbjct 112717 TGCTGCTTAATGTAGGCAATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGGGTGGGG 112776 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || |||||||| ||||| || || | ||| |||||||| ||||| ||||| Sbjct 112777 ATCAGCTCACCAGTGAGGACGTTGATCAGAGTCGACTTACCCGCACCGTTGGGACCAATA 112836 Query 225161 ACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCCA 225220 ||| |||| ||||| || | ||| || | | || | ||| |||| ||| | Sbjct 112837 ACGGCAATACGGGAACCCAGAGAGCACTGGAAGGTAATGTCG--GAA-ATCT--GGGGCT 112891 Query 225221 GTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGT------------CC 225268 ||||| || || | | | | || || |||||||| || Sbjct 112892 TCGTGGTACCG---GGGTACTGGAAGGA-CATCTTGGTGGCACGGAGAATGGCCTTAGCC 112947 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328 |||| | | |||||| ||||| |||||||||||||||| ||| || ||| | | Sbjct 112948 TTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAACTTGAACTCAATCTCCGAGGCG 113007 Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCG 225388 || ||||||||||| ||| || | ||| ||||| ||| |||||| || Sbjct 113008 CCGAGCTCGTAGTAAGAACGGGCCGAAGGGCACTTCTTGACGAACTCAGCCAGGTTACCA 113067 Query 225389 AGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCGTC 225447 ||| | | ||||||| | || |||| || | ||| ||| | ||| || ||| Sbjct 113068 CGGTAGCGCTTAAGCTTGAAGCGCT---CGTAGTGGATAATGTGCTG-GCAGACGTTGTC 113123 Query 225448 AAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAGGT 225506 |||||||||||||||||| || ||||||||||| | || | | || ||| |||| Sbjct 113124 AAGGAAGCCAGAGTCGTGAGAGACAATGATGGAAGTGCAGG---GAGAGTTCCTC-AGGT 113179 Query 225507 GCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCA 225566 |||||| || ||||| |||| |||| |||||| || || ||||| ||||||| Sbjct 113180 AATCCTCGAGCCAGGCAACGTTCTTGACATCCAAGTGGTTGGTGGGCTCGTCAAGAAGCA 113239 Query 225567 GGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGG 225626 | || || | | || || ||| || |||| ||||||||| ||||| || || | Sbjct 113240 GAATATCGGGGGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCACCAG 113299 Query 225627 ACAGGGAGCCGATTGAAACAGAGTGCTTAGCT--TCGTCAAAGCCGTACTCCAGGAGCGT 225684 | |||| | ||| | | || | | || ||| |||||| |||| ||| Sbjct 113300 AAAGGGCGGAGATCTCACCCT--TGATCATCTGCTCGGTGAAGCCGAACTCGTCCAGCTG 113357 Query 225685 CTGGATAA--TGCGCTCGGGAGA-GCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTA 225741 || ||| | | ||| | | | | | |||| | | | | | | | Sbjct 113358 CTTGATGACATCATCTCTGCTGGTGGTAACACCGGCCTCCTCCAGCTTCTTCATGGTCCA 113417 Query 225742 ATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCG 225801 ||| |||||| || | | ||| | ||| | |||||| || ||| | || ||| Sbjct 113418 CTCAATGGTGGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTCGACGAAGACGGTCTT 113477 Query 225802 GAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGT 225861 || || ||| | |||||| ||||| | ||| | || || ||||| | ||||| Sbjct 113478 GACCTCAGACTGCTTGGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGGGT 113537 Query 225862 ACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAG 225921 |||||| | |||||||||||| || ||||| | | || ||||| | ||| Sbjct 113538 GGACTTGCCGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTAAGACGGAG 113597 Query 225922 GCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAG 225981 | | || ||| || || ||||| |||||||||| |||||||| ||| | |||||| Sbjct 113598 GTGAGTCTGGTTAAGAAGAATCTTAGCACCATAGGCGAGGGAGAAGGTGCAGTTGCACAG 113657 Query 225982 GTCCTCACCCTCCTCGGTC-TCCT 226004 ||||||||||||| |||| |||| Sbjct 113658 ATCCTCACCCTCCT-GGTCATCCT 113680 >seq13 Length=240985 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| | |||||||| || |||||||| || || ||| Sbjct 38417 CCACCACGGAGACGAAGAACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 38358 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | ||||| || || ||| Sbjct 38357 AGAGTACGTCCATCCTCAAGCTGCTTACCAGCGAAAATGAGACGCTGTTGATCCGGGGGA 38298 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| ||| || ||||| || | || || || Sbjct 38297 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATGGTATCAGAAGACTCGACC 38238 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || ||||||||||||||||| |||||||| Sbjct 38237 TCCAAGGTAATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 38191 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || |||||||| |||||||| Sbjct 38189 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGAA 38130 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || ||||| || ||| Sbjct 38129 AGGGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 38070 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||| ||||| | || || || Sbjct 38069 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 38010 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| ||||| ||||| || || ||||||||||| |||||||| Sbjct 38009 TCCAAGGTAATGGTCTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 37963 Score = 158 bits (174), Expect = 2e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || || || || | |||||||| || ||||| || || || ||||| | Sbjct 38653 TTTACTGGCCACCACGGAGACGAAGAACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGT 38594 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||||| || || | ||||| || | |||||| || || || || || | || |||| Sbjct 38593 AGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGT 38534 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || |||||||| |||||||| |||||||| | |||||| || ||||| || | | Sbjct 38533 CCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCAGAAG 38474 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || ||||| | || ||||| ||||| ||||||||||||||||| |||||||| Sbjct 38473 ACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 38419 >seq3 Length=407529 Score = 159 bits (176), Expect = 6e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| || |||||||| || || ||| Sbjct 21592 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 21533 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 21532 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 21473 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || || ||||| | ||||||| ||||| ||||| | || || || Sbjct 21472 ATGCCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 21413 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||| ||| ||||| || ||||| |||||||||||||| Sbjct 21412 TCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 21375 >seq157 Length=65766 Score = 114 bits (126), Expect = 2e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| || || || || || | ||||| || | |||||| || || || || Sbjct 45138 TTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATC 45079 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || || || || |||||||| ||||| || || ||||| | |||||| ||| Sbjct 45078 AGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 45019 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||| | || || || || | ||| || || || ||||| |||||||| ||||| Sbjct 45018 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTAACGAAA 44959 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 44958 ATCTGCAT 44951 >seq116 Length=85249 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/202 (71%), Gaps = 14/202 (7%) Strand=Plus/Minus Query 31401 TCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTCAAAGATTTCCCGGTTGAG-GTT 31459 |||||||| ||||||| || || |||||| |||||||||| | ||| ||| Sbjct 69487 TCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCT-------GAGTGTT 69435 Query 31460 C--TTGGCC-GCGTCAG---AGTCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTGAAG 31513 | ||||| || |||| | ||||| ||||||||||| | ||| | || ||| Sbjct 69434 CAATTGGCGAGCTTCAGCTGACTCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAGCAAG 69375 Query 31514 ACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCGCCTCGGGAAT 31573 |||||| |||||||| ||||| || || |||||||||| || | | |||||||||| Sbjct 69374 ACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTGTAAGCCTCGGGAAC 69315 Query 31574 TGCGTAGGACATGACGTCAATG 31595 | |||| ||||||||||| Sbjct 69314 GGGGTAGTGGTTGACGTCAATG 69293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921614980939680