Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq46 311 2e-79
seq116 255 1e-62
>seq46
Length=146035
Score = 311 bits (344), Expect = 2e-79
Identities = 606/878 (69%), Gaps = 34/878 (4%)
Strand=Plus/Minus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344
||| || |||| || || ||| |||||||||||||| || || |||||| ||
Sbjct 142368 ATCAAGTACCATGAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCGTTCTGGACTGCT 142309
Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGA 42400
||||||||||| ||| | ||||| || |||| | || | ||| | | ||
Sbjct 142308 GAGGAGATTGATCTGTCTAAGGATCTTCACGACTGGAACA-ACCGCATGAACAAGGATGA 142250
Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460
|||| || || |||| || || ||||| || || ||||| ||||| || || ||
Sbjct 142249 GCAGTTCTTTATCTCTCACATTCTCGCTTTCTTTGCTGCTTCTGATGGCATTGTGAACGA 142190
Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520
|||||| | | || ||||| ||| ||||| ||||||||||||||
Sbjct 142189 GAACCTTGTTGAGCGCTTTTCCGCTGAGGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGG 142130
Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580
|||||||| || |||||| | ||||||||| ||| || ||| | | || ||
Sbjct 142129 TTTCCAGATCATGATGGAGAACATTCACTCTGAGACCTACTCCCTGCTGATTGATACTTA 142070
Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640
|||| ||| |||| | |||| | || || || ||||| || || || ||||||||
Sbjct 142069 CATCAAGGAGCCCGCCCAGCGCACTTATCTCTTTAACGCCATTGACACCATTCCCTGCAT 142010
Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGG 42697
||||| || ||||| || || ||||| ||| | || | || || |
Sbjct 142009 TCGCCGCAAGGCCGATTGGGCCCTGAAGTGGATTGCCGACA---AGGAATCCACCTTTGC 141953
Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757
|| | || || || ||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct 141952 TCAGCGCCTCGTTGCTTTTGCGGCCGTCGAGGGTATCTTCTTCTCCGGTGCCTTTGCCTC 141893
Query 42758 CATCTTCTG---GCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
||||||||| || ||||| ||| || ||||| || || || || || || || ||
Sbjct 141892 CATCTTCTGGTTGCGCAAGC--GTGGTCTC-ATGCCTGGCCTGACTTTTTCCAATGAGCT 141836
Query 42815 CATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT 42874
|| | |||||||| || || | ||||||||||||||| ||| ||| |||||
Sbjct 141835 GATTTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTCTTGTACTC---TCACCT 141779
Query 42875 CAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931
|| |||| ||||| | ||| | | | ||| || |||||||| || || || | ||
Sbjct 141778 CA---ACAACCGCCCTAGCAAGCAACTGATCCAGGAAATCATCACCGATGCTGTCGCTAT 141722
Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACC 42990
|||||||||||||| || || | |||||| ||| |||| |||| |||||| ||||
Sbjct 141721 TGAGAAGGAGTTCCTTACCGAGGCCCTGCCCTGTG-CCCTTCTCGGTATGAACGCTGACC 141663
Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGGTCTC-A 43047
||||| | ||||||| ||| ||| ||||||| ||| || |||| | ||| | |
Sbjct 141662 TCATGAAGACGTACATCGAGTTCGTTGCCGACCGTCTTCTCGTTGCC--CTTGGTAACGA 141605
Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107
| | ||||||| | | |||||||||||| ||||||||||| ||| | | ||||
Sbjct 141604 GAAG-GTCTACAAGGCTTCCAACCCCTTCGACTTCATGGAGAACATTTCGCTTGGTGGCA 141546
Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||| |||||||||||||| | || ||||||
Sbjct 141545 AGACCAACTTCTTCGAGAAGCGCGTTGGTGATTACCAG 141508
>seq116
Length=85249
Score = 255 bits (282), Expect = 1e-62
Identities = 924/1436 (64%), Gaps = 41/1436 (3%)
Strand=Plus/Minus
Query 243997 GATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAG 244056
|||||| || | || || |||| | | |||| || | ||||||||| ||||||
Sbjct 69860 GATGTTTTGAATGGAACCGTTGTCGGCAATGATACGGTTCTTCATGTTATCAGACCACAG 69801
Query 244057 GCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAG 244116
||| | | |||| | || || | ||| || ||||| ||||| || | |||
Sbjct 69800 GCCAAGGTCGACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAG 69741
Query 244117 CACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTAT 244176
|| ||||||||||||| |||| | || || |||| || ||| |||||||||| ||
Sbjct 69740 GACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAAT 69681
Query 244177 CTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCT 244236
||||| || || || ||||||||||| | | || ||| ||| | || |||| | |
Sbjct 69680 CTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTT 69621
Query 244237 CTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAG 244296
|| ||| | | || |||||||||| | |||| | | |||
Sbjct 69620 CTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAA---------GGTCACTGGGGGTGAC 69570
Query 244297 GCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTA 244356
| ||||||| |||||||| || | |||| | |||||| |||||||||||| | |||
Sbjct 69569 GTCCCACATATCAAACTGGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTA 69510
Query 244357 GGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTC 244416
| ||| || || | | || || | | || || ||||||| ||| ||||||||
Sbjct 69509 CGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTC 69450
Query 244417 GAAGATCATCTTGTTCATGTCGCGGGCCT----TGCCGCAGGTGAAGGGGATGCCCATCA 244472
|||||| |||||| | ||| || | || | || ||||| |||| ||
Sbjct 69449 AAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCA----AAGGGCATGCGCAGAG 69394
Query 244473 TCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGG 244532
| |||| | || || || ||||| || || | || ||||| | ||| ||| |||||
Sbjct 69393 CTAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTTGC 69334
Query 244533 AGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGG 244592
| || ||||| |||||||| |||| |||| || | ||| | ||||||
Sbjct 69333 TGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAA 69274
Query 244593 TGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGA 244652
| | | ||| ||| |||| ||| |||||||| || | | || |
Sbjct 69273 CAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTG------TTGGTG- 69221
Query 244653 TGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712
| || | |||||| || ||| || | | ||| |||||||| || || ||||| |
Sbjct 69220 TAGTCA-----ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCAT 69166
Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772
| | |||| || |||||| ||||| ||||| || |||||| ||||| |
Sbjct 69165 CAGGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGAT 69106
Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832
|| || ||| ||| |||||| ||||||||| | ||||||||| |||||||
Sbjct 69105 TCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCT 69046
Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892
|| ||||| | || | | | |||||| | | |||||| | || || |||
Sbjct 69045 CGGTTTGGGCCTCCAGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTTAGACG-GCCA 68987
Query 244893 TG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCT 244951
| ||||| || || |||||| |||||||| || ||| || || |
Sbjct 68986 CGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCC 68927
Query 244952 AGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGC 245011
||||| |||||| |||||||| ||| |||| || || | || | | || |
Sbjct 68926 AGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTC 68867
Query 245012 ATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAG 245071
||||| || || |||||||| || || |||| || || | || | ||| ||| |
Sbjct 68866 ATGAACAGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTG 68807
Query 245072 CCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130
|| ||| ||||| | || || | || ||||| ||||| | ||||| ||||| | ||
Sbjct 68806 CC-GTGATTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATA 68748
Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGT 245189
| ||| | || ||||| ||||||||||| ||||||| || ||| || | ||
Sbjct 68747 AATAGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGT-CAACATAACGGGCAGTGTTGT 68689
Query 245190 TGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGG 245249
|||||| || || | || || || |||||||| |||||||| || |||||| |
Sbjct 68688 TGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAG 68629
Query 245250 CGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGA 245306
||| | | | || ||| | || | ||| | || || || |||||| |
Sbjct 68628 AGCCGGTAGCACGGATACGGTGAACGTTG---AGGCCAATACCACCCGCCATCTTGGAAA 68572
Query 245307 TGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGA 245366
| | || || |||| | ||| || || ||||| |||||||| |||||||| |
Sbjct 68571 TCATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAA 68512
Query 245367 GCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGG 245422
||| ||||| || || ||||| | || ||| | | | |||||||||||||||
Sbjct 68511 CCAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGG 68456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944331598069440
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