Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq46 156 9e-33
seq53 89.7 1e-12
>seq46
Length=146035
Score = 156 bits (172), Expect = 9e-33
Identities = 357/529 (67%), Gaps = 9/529 (2%)
Strand=Plus/Minus
Query 243215 ACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTAG 243274
||||||| || | |||||| ||| |||||| | ||||| | ||||||| | |
Sbjct 142034 ACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGCCGATTGGGCCCTGAAGTGGATTG 141975
Query 243275 A--ACCCGGTAAATCA--TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATT 243330
|| || || || |||||| |||| ||||| || | | | ||| || |||||
Sbjct 141974 CCGACAAGG-AATCCACCTTTGCTCAGCGCCTCGTTGCTTTTGCGGCCGTCGAGGGTATC 141916
Query 243331 CTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGC 243390
| || ||||| || | ||||||| ||| |||| || ||| | |||||||||
Sbjct 141915 TTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCGCAAGCGTGGTCTCATGCCTGGC 141856
Query 243391 CTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAG 243450
|| | | || || ||| | || ||| |||||||| |||||| | || |
Sbjct 141855 CTGACTTTTTCCAATGAGCTGATTTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGC 141796
Query 243451 CTTATGTATTCAAAGCTCCAGAACAAGC-TACCATTCGAAACGGTCAAACAAATCATCAC 243509
|| |||| || | ||| | ||| | || || | || | || | ||||||||||
Sbjct 141795 CTCTTGTACTCTCACCTCAACAACCGCCCTAGCAAGC-AACTGATCCAGGAAATCATCAC 141737
Query 243510 AGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGG 243569
|| || || | | || ||||| ||| || ||| || | || || ||| | ||
Sbjct 141736 CGATGCTGTCGCTATTGAGAAGGAGTTCCTTACCGAGGCCCTGCCCTGTGCCCTTCTCGG 141677
Query 243570 CATGAACTCTGAACTCATGG-GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCG 243628
|||||| |||| |||||| ||| ||||||||| ||||| |||||||| || || | |
Sbjct 141676 TATGAACGCTGACCTCATGAAGAC-GTACATCGAGTTCGTTGCCGACCGTCTTCTCGTTG 141618
Query 243629 CGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTT 243688
| |||||| | ||||| || ||||| | |||||||| | ||| |||||| |||||
Sbjct 141617 CCCTTGGTAACGAGAAGGTCTACAAGGCTTCCAACCCCTTCGACTTCATGGAGAACATTT 141558
Query 243689 CGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
||||| || || || ||||||||||| ||||| || ||||||| ||
Sbjct 141557 CGCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGATTACCA 141509
>seq53
Length=136082
Score = 89.7 bits (98), Expect = 1e-12
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||| ||| |||| || || ||||| || || || || || | ||
Sbjct 113493 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGGGTGGACTTGCCGGAACC 113552
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || || || ||||||||||| | |||||||| ||| || | || | ||| ||
Sbjct 113553 GTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTAAGACGGAGGTGAGTCTGGTTAAG 113612
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
|||||| || ||||||| || || || || || | ||||||||||||||
Sbjct 113613 AAGAATCTTAGCACCATAGGCGAGGGAGAAGGTGCAGTTGCACAGATCCTCACC 113666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102870899861400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |