Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq46 156 9e-33 seq53 89.7 1e-12 >seq46 Length=146035 Score = 156 bits (172), Expect = 9e-33 Identities = 357/529 (67%), Gaps = 9/529 (2%) Strand=Plus/Minus Query 243215 ACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTAG 243274 ||||||| || | |||||| ||| |||||| | ||||| | ||||||| | | Sbjct 142034 ACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGCCGATTGGGCCCTGAAGTGGATTG 141975 Query 243275 A--ACCCGGTAAATCA--TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATT 243330 || || || || |||||| |||| ||||| || | | | ||| || ||||| Sbjct 141974 CCGACAAGG-AATCCACCTTTGCTCAGCGCCTCGTTGCTTTTGCGGCCGTCGAGGGTATC 141916 Query 243331 CTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGC 243390 | || ||||| || | ||||||| ||| |||| || ||| | ||||||||| Sbjct 141915 TTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCGCAAGCGTGGTCTCATGCCTGGC 141856 Query 243391 CTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAG 243450 || | | || || ||| | || ||| |||||||| |||||| | || | Sbjct 141855 CTGACTTTTTCCAATGAGCTGATTTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGC 141796 Query 243451 CTTATGTATTCAAAGCTCCAGAACAAGC-TACCATTCGAAACGGTCAAACAAATCATCAC 243509 || |||| || | ||| | ||| | || || | || | || | |||||||||| Sbjct 141795 CTCTTGTACTCTCACCTCAACAACCGCCCTAGCAAGC-AACTGATCCAGGAAATCATCAC 141737 Query 243510 AGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGG 243569 || || || | | || ||||| ||| || ||| || | || || ||| | || Sbjct 141736 CGATGCTGTCGCTATTGAGAAGGAGTTCCTTACCGAGGCCCTGCCCTGTGCCCTTCTCGG 141677 Query 243570 CATGAACTCTGAACTCATGG-GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCG 243628 |||||| |||| |||||| ||| ||||||||| ||||| |||||||| || || | | Sbjct 141676 TATGAACGCTGACCTCATGAAGAC-GTACATCGAGTTCGTTGCCGACCGTCTTCTCGTTG 141618 Query 243629 CGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTT 243688 | |||||| | ||||| || ||||| | |||||||| | ||| |||||| ||||| Sbjct 141617 CCCTTGGTAACGAGAAGGTCTACAAGGCTTCCAACCCCTTCGACTTCATGGAGAACATTT 141558 Query 243689 CGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||| || || || ||||||||||| ||||| || ||||||| || Sbjct 141557 CGCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGATTACCA 141509 >seq53 Length=136082 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || |||| ||| |||| || || ||||| || || || || || | || Sbjct 113493 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGGGTGGACTTGCCGGAACC 113552 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || || ||||||||||| | |||||||| ||| || | || | ||| || Sbjct 113553 GTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTAAGACGGAGGTGAGTCTGGTTAAG 113612 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||||| || ||||||| || || || || || | |||||||||||||| Sbjct 113613 AAGAATCTTAGCACCATAGGCGAGGGAGAAGGTGCAGTTGCACAGATCCTCACC 113666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870899861400