Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq46 176 5e-39
>seq46
Length=146035
Score = 176 bits (194), Expect = 5e-39
Identities = 536/815 (66%), Gaps = 19/815 (2%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGA-TATTCTCCA 125816
||| || ||||| ||||||||||||||||| ||||| || |||||| | | |||||||
Sbjct 141511 GTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCA-CCAAGCGAAATGTTCTCCA 141569
Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAG 125874
| || || || ||||| | || | | || | | ||| || ||| ||
Sbjct 141570 TGAAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACC--AAGGGCAACGAGAAG 141627
Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934
||| || | ||| |||| |||||| ||| |||| ||||||||||| |||
Sbjct 141628 ACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGGC 141687
Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994
||| || || || || | |||| |||||||||| | || || || | ||| |
Sbjct 141688 ACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATTTC 141747
Query 125995 GTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051
|| || | | | ||| | | ||| | || | ||||| || ||||||
Sbjct 141748 CTGGATCAGTTGCTTGCTAGGGCGGTTGTTGAGGTGAGAGTACAAGAGG--CA-GGCAAA 141804
Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111
|| ||| |||||||||||||| || || || ||||| || || ||| || |||||
Sbjct 141805 GTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCAT 141864
Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171
|||||| ||||| ||||||||| || | ||| | ||| ||||||||||| |||||
Sbjct 141865 GAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATACCCTC 141924
Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACT 126230
|| ||| || |||| ||| |||| |||||||| | | | |||| | ||| |||||
Sbjct 141925 GACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTG-GATTCCTTGTCGGCAATCCACT 141983
Query 126231 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTT 126290
||| ||||| | ||||| || || || | ||| | || || | |||||| |
Sbjct 141984 TCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGAT 142043
Query 126291 CCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGT 126350
| | | || || |||||||| |||| || || || || || || ||
Sbjct 142044 AAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGT 142103
Query 126351 GGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACC 126409
| | | | ||| || | ||| | ||||||| |||| || ||| | ||| |||
Sbjct 142104 GAATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGAACC 142162
Query 126410 TCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 126469
||| ||| ||| | | | ||||| ||||| ||||| || ||||||| ||
Sbjct 142163 TCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAGAAA 142222
Query 126470 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 126526
|| || || | || || ||| |||| || ||||| || | |||||||||| |
Sbjct 142223 GCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGA 142282
Query 126527 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||||| || ||||| | |||||| ||||||||
Sbjct 142283 AGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 142317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597348791303520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |