Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq46 176 5e-39 >seq46 Length=146035 Score = 176 bits (194), Expect = 5e-39 Identities = 536/815 (66%), Gaps = 19/815 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGA-TATTCTCCA 125816 ||| || ||||| ||||||||||||||||| ||||| || |||||| | | ||||||| Sbjct 141511 GTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCA-CCAAGCGAAATGTTCTCCA 141569 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAG 125874 | || || || ||||| | || | | || | | ||| || ||| || Sbjct 141570 TGAAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACC--AAGGGCAACGAGAAG 141627 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 ||| || | ||| |||| |||||| ||| |||| ||||||||||| ||| Sbjct 141628 ACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGGC 141687 Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994 ||| || || || || | |||| |||||||||| | || || || | ||| | Sbjct 141688 ACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATTTC 141747 Query 125995 GTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051 || || | | | ||| | | ||| | || | ||||| || |||||| Sbjct 141748 CTGGATCAGTTGCTTGCTAGGGCGGTTGTTGAGGTGAGAGTACAAGAGG--CA-GGCAAA 141804 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || ||| |||||||||||||| || || || ||||| || || ||| || ||||| Sbjct 141805 GTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCAT 141864 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 |||||| ||||| ||||||||| || | ||| | ||| ||||||||||| ||||| Sbjct 141865 GAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATACCCTC 141924 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACT 126230 || ||| || |||| ||| |||| |||||||| | | | |||| | ||| ||||| Sbjct 141925 GACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTG-GATTCCTTGTCGGCAATCCACT 141983 Query 126231 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTT 126290 ||| ||||| | ||||| || || || | ||| | || || | |||||| | Sbjct 141984 TCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGAT 142043 Query 126291 CCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGT 126350 | | | || || |||||||| |||| || || || || || || || Sbjct 142044 AAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGT 142103 Query 126351 GGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACC 126409 | | | | ||| || | ||| | ||||||| |||| || ||| | ||| ||| Sbjct 142104 GAATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGAACC 142162 Query 126410 TCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 126469 ||| ||| ||| | | | ||||| ||||| ||||| || ||||||| || Sbjct 142163 TCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAGAAA 142222 Query 126470 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 126526 || || || | || || ||| |||| || ||||| || | |||||||||| | Sbjct 142223 GCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGA 142282 Query 126527 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| || ||||| | |||||| |||||||| Sbjct 142283 AGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 142317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348791303520