Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq13 109 5e-19 >seq13 Length=240985 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || ||||| || || ||||||||||| | | ||| || | || Sbjct 38175 AAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCATC 38116 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||||||||| | || || ||||||||||| |||||||| || || || || Sbjct 38115 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 38056 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | || || | || || || | || | ||| Sbjct 38055 CTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCCAAGGTAATGGT 37996 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || |||| ||| || |||||||| ||||| Sbjct 37995 CTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 37963 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || ||||||||||| || | | ||||| | || ||||||||||| || Sbjct 38615 GTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTTCCA 38556 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| || ||||| || || || || || || || ||| Sbjct 38555 GCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 38496 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | |||||| | || ||||| | ||| | |||||| || || | || Sbjct 38495 ACATTGTCAATGGTATCAGAAGACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGTC 38436 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 38435 TTGACGAAAATCTGCAT 38419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499640777859360