Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq116 190 2e-43
>seq116
Length=85249
Score = 190 bits (210), Expect = 2e-43
Identities = 604/921 (66%), Gaps = 18/921 (2%)
Strand=Plus/Plus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||||| |||||| || |||||| || || ||||| ||| | ||||||| | ||
Sbjct 68283 TACTTTGGCTTCAAGACCCTGGAGCGTTCCTATCTCCTTAAGCTTGATGGCAAGATTGTT 68342
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
||||| || || || || | ||||| || || | || || || || | || ||
Sbjct 68343 GAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCGTTTGGGGTGACAA--TGTCG 68400
Query 93844 AA--TGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCACCCCG 93900
| |||| || | ||| || |||| |||| | || |||| | ||||
Sbjct 68401 AGCGTGTTCTGGAGACTTACAACCTCATGTCTAGCAAGTTCTTCACTCATG-CATCCCCC 68459
Query 93901 ACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAA 93959
|| |||||||| || || || || | | ||| | |||||||| |||||| | ||| |
Sbjct 68460 ACTCTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCTTCGTGCTTCCTGGTTGAC-AT 68518
Query 93960 CAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAA 94019
|||| ||| ||| || || | || | | | ||| ||||| | || || ||
Sbjct 68519 GAAGGATGACAGCATTGAGGGTATCTATGATACCTTGAAGACTTGTGCTATGATTTCCAA 68578
Query 94020 ATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATC 94077
||||| || || || ||| || ||| |||| ||||| | || || ||||||
Sbjct 68579 GATGGCGGGTGGTATTGGCCTCAACGTTCAC--CGTATCCGTGCTACCGGCTCTTACATC 68636
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
|||||||| || || || ||||| |||| || |||||||| |||||||||||| |
Sbjct 68637 GCTGGTACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACT 68696
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| || || || ||||||||||| | | | ||| |||| || | ||||| |||
Sbjct 68697 GCCCGTTATGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCTATTTATCTTGAG 68756
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| ||||| || ||||| | ||| |||| || || ||||| |||||||| || |
Sbjct 68757 CCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAG 68816
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317
| | ||| | || || ||| ||||| ||| | || || || || ||||| || |
Sbjct 68817 GTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATT 68876
Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377
||||| || | ||||| ||| | || ||||| || || || || ||| | |||
Sbjct 68877 GAGAAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGC 68936
Query 94378 TGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGG 94434
| || || | || || || |||| | || ||| | |||| | |||| |
Sbjct 68937 TACGG--CGATGAATTCGAGGCTCTGTACGAGAAGTATGAAAAGGAGGGTCGTGGCC-GT 68993
Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494
|| | ||| |||||| ||| || || |||| | || ||||| ||
Sbjct 68994 CTAACCATTAAGGCTCAGAAGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGA 69053
Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554
| |||| ||| |||| ||||||| | |||| ||| ||||||| || | || ||
Sbjct 69054 AACCCCTTCATGTTGTACAAGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGT 69113
Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614
||| ||||| || |||||||| |||||| |||||||| | |||| || ||| ||
Sbjct 69114 ACCATCCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTT 69173
Query 94615 GCTGTGTGTAACCTGGGCTCC 94635
||||| || ||||| | ||||
Sbjct 69174 GCTGTTTGCAACCTTGCCTCC 69194
Score = 107 bits (118), Expect = 2e-18
Identities = 203/296 (69%), Gaps = 2/296 (1%)
Strand=Plus/Plus
Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137
||||||| ||| | || || | || |||||||| || ||| || ||||||| |
Sbjct 69625 ACGGTGTTCGCAACTCTCTTCTCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTC 69684
Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197
| ||||||||||||| |||||||| | |||||||||| | ||| | | || || || |
Sbjct 69685 TGGGCAACAACGAGTGCTTCGAACCATACACCTCCAACATCTACCAGCGCCGTGTCCTGG 69744
Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTG 95256
| || || |||| || | ||| | | || || || || | || | || || ||
Sbjct 69745 CTGGTGAGTTCCAGGTTGTTAACCCGTGGTTGCTCCGCGATCTGGTCGAC-CTTGGCCTG 69803
Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCG 95316
||| ||| || | ||||||| | | || |||||| ||| | || ||||||||
Sbjct 69804 TGGTCTGATAACATGAAGAACCGTATCATTGCCGACAACGGTTCCATTCAAAACATCCCC 69863
Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| || | || |||||||| || |||||||| |||||||| || | |||||
Sbjct 69864 AGTATTCCTGCTGATATCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCG 69919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719217478240
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