Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq116 190 2e-43 >seq116 Length=85249 Score = 190 bits (210), Expect = 2e-43 Identities = 604/921 (66%), Gaps = 18/921 (2%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| || |||||| || || ||||| ||| | ||||||| | || Sbjct 68283 TACTTTGGCTTCAAGACCCTGGAGCGTTCCTATCTCCTTAAGCTTGATGGCAAGATTGTT 68342 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 ||||| || || || || | ||||| || || | || || || || | || || Sbjct 68343 GAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCGTTTGGGGTGACAA--TGTCG 68400 Query 93844 AA--TGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCACCCCG 93900 | |||| || | ||| || |||| |||| | || |||| | |||| Sbjct 68401 AGCGTGTTCTGGAGACTTACAACCTCATGTCTAGCAAGTTCTTCACTCATG-CATCCCCC 68459 Query 93901 ACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAA 93959 || |||||||| || || || || | | ||| | |||||||| |||||| | ||| | Sbjct 68460 ACTCTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCTTCGTGCTTCCTGGTTGAC-AT 68518 Query 93960 CAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAA 94019 |||| ||| ||| || || | || | | | ||| ||||| | || || || Sbjct 68519 GAAGGATGACAGCATTGAGGGTATCTATGATACCTTGAAGACTTGTGCTATGATTTCCAA 68578 Query 94020 ATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATC 94077 ||||| || || || ||| || ||| |||| ||||| | || || |||||| Sbjct 68579 GATGGCGGGTGGTATTGGCCTCAACGTTCAC--CGTATCCGTGCTACCGGCTCTTACATC 68636 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || || || ||||| |||| || |||||||| |||||||||||| | Sbjct 68637 GCTGGTACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACT 68696 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || || || || ||||||||||| | | | ||| |||| || | ||||| ||| Sbjct 68697 GCCCGTTATGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCTATTTATCTTGAG 68756 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || ||||| || ||||| | ||| |||| || || ||||| |||||||| || | Sbjct 68757 CCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAG 68816 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | ||| | || || ||| ||||| ||| | || || || || ||||| || | Sbjct 68817 GTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATT 68876 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 ||||| || | ||||| ||| | || ||||| || || || || ||| | ||| Sbjct 68877 GAGAAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGC 68936 Query 94378 TGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGG 94434 | || || | || || || |||| | || ||| | |||| | |||| | Sbjct 68937 TACGG--CGATGAATTCGAGGCTCTGTACGAGAAGTATGAAAAGGAGGGTCGTGGCC-GT 68993 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 || | ||| |||||| ||| || || |||| | || ||||| || Sbjct 68994 CTAACCATTAAGGCTCAGAAGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGA 69053 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | |||| ||| |||| ||||||| | |||| ||| ||||||| || | || || Sbjct 69054 AACCCCTTCATGTTGTACAAGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGT 69113 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || |||||||| |||||| |||||||| | |||| || ||| || Sbjct 69114 ACCATCCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTT 69173 Query 94615 GCTGTGTGTAACCTGGGCTCC 94635 ||||| || ||||| | |||| Sbjct 69174 GCTGTTTGCAACCTTGCCTCC 69194 Score = 107 bits (118), Expect = 2e-18 Identities = 203/296 (69%), Gaps = 2/296 (1%) Strand=Plus/Plus Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 ||||||| ||| | || || | || |||||||| || ||| || ||||||| | Sbjct 69625 ACGGTGTTCGCAACTCTCTTCTCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTC 69684 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 | ||||||||||||| |||||||| | |||||||||| | ||| | | || || || | Sbjct 69685 TGGGCAACAACGAGTGCTTCGAACCATACACCTCCAACATCTACCAGCGCCGTGTCCTGG 69744 Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTG 95256 | || || |||| || | ||| | | || || || || | || | || || || Sbjct 69745 CTGGTGAGTTCCAGGTTGTTAACCCGTGGTTGCTCCGCGATCTGGTCGAC-CTTGGCCTG 69803 Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCG 95316 ||| ||| || | ||||||| | | || |||||| ||| | || |||||||| Sbjct 69804 TGGTCTGATAACATGAAGAACCGTATCATTGCCGACAACGGTTCCATTCAAAACATCCCC 69863 Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || | || |||||||| || |||||||| |||||||| || | ||||| Sbjct 69864 AGTATTCCTGCTGATATCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCG 69919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719217478240