Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq46 152 6e-32 >seq46 Length=146035 Score = 152 bits (168), Expect = 6e-32 Identities = 531/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || ||||||||||||||||| ||||| ||| | || || |||||||| Sbjct 141511 GTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCAT 141570 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | || | | || | | ||| || ||| ||| Sbjct 141571 GAAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACC--AAGGGCAACGAGAAGA 141628 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | ||| |||| |||||| ||| |||| ||||||||||| ||| | Sbjct 141629 CGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGGCA 141688 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || || || | |||| |||||||||| | ||||| || | ||| | Sbjct 141689 CAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATTTCC 141748 Query 127469 TGAAT-AGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAA 127524 || || ||| | | | ||| | | ||| | || | ||||| || ||||| Sbjct 141749 TGGATCAGT-TGCTTGCTAGGGCGGTTGTTGAGGTGAGAGTACAAGAGG--CAG-GCAAA 141804 Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584 || ||| |||||||||||||| || || || ||||| || || ||| || ||||| Sbjct 141805 GTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCAT 141864 Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644 |||||| ||||| ||||||||| || | ||| | || ||||||||||| ||||| Sbjct 141865 GAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATACCCTC 141924 Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACT 127703 || ||| || |||| || |||| ||||||| | | | |||| ||| ||||| Sbjct 141925 GACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTG-GATTCCTTGTCGGCAATCCACT 141983 Query 127704 TCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTT 127763 ||| ||||| | ||||| || || || | ||| | || || | |||||| | Sbjct 141984 TCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGAT 142043 Query 127764 CCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGT 127823 | | | || || |||||||| |||| || || || || || || || Sbjct 142044 AAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGT 142103 Query 127824 GGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACC 127882 | | | | ||| || | ||| | ||||||| |||| || ||| | ||| ||| Sbjct 142104 GAATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGAACC 142162 Query 127883 TCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 127942 ||| ||| ||| | | | ||||| ||||| ||||| || ||||||| || Sbjct 142163 TCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAGAAA 142222 Query 127943 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCG 127999 || || || | || || ||| |||| || ||||| || | |||||||||| Sbjct 142223 GCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGA 142282 Query 128000 AGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||||| || ||||| | |||||| |||||||| Sbjct 142283 AGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 142317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502261267040