Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq116 205 1e-47 seq46 129 9e-25 >seq116 Length=85249 Score = 205 bits (226), Expect = 1e-47 Identities = 440/650 (68%), Gaps = 11/650 (2%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 ||||| |||||||||||||| || ||| || ||||||| | ||||||| | | Sbjct 70069 AGATAATACATGCCGGTCTTAAGACCCAGCTTCCACCCGGTGAAGTGCATGCTGGTAATC 70010 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | ||||||| |||||| || || || ||||| ||| |||||||||| Sbjct 70009 TTGCCCATGGTGGGGTCCTTCATGTGGATATTAAGGGACTGAGATTGATCGATGAAAGCA 69950 Query 204005 GCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAAC 204064 | ||||| || ||||| | | || ||| ||| ||||| |||||||| |||||| || Sbjct 69949 CCACGATCGGCAGCCATCTGAACAACGGTACGCTGAGAAATTTCCCACACAGTCTTGTAC 69890 Query 204065 ACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCAT 204123 | | || | | ||| | | || | || ||| | || ||||||||||| || Sbjct 69889 AGAGCCTTGATATCAGCAGGAATA-CTGGGGATGTTTTGAATGGAACCGTTGTCGGCAAT 69831 Query 204124 CAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTG 204183 | | || || | | || ||||| ||| | || ||| || || | || Sbjct 69830 GATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCGACCAGATCGCGGAGCAACCA 69771 Query 204184 GGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAA 204243 ||||| | | ||| || || || | ||| || | || | | | |||| |||| | Sbjct 69770 CGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTA 69711 Query 204244 TGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGC 204303 ||||||||| |||||||||||| | |||||| | || ||||| || ||||||||||| Sbjct 69710 TGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGC 69651 Query 204304 CAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGT 204362 ||||| || |||||||| ||||||| || | || |||| ||| ||||| ||||||| Sbjct 69650 AAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGA-TCTGCTCCTTAAGAGAAGTCCAGT 69592 Query 204363 CGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTG 204422 | | ||||||| | ||| ||||||| || ||||| | ||| || || ||| | Sbjct 69591 CCCAAAGGTCACTGGGGGTGACGTCCCACATATCAAACTGGAGGATACCCTGGGAGACGG 69532 Query 204423 GGCTGCCCTTGTACGTCGGATAAGGCTGATCCTC---TTCTGCCAGCTTGCACGAGGCGG 204479 | ||||| ||| || | || | | |||| || | | || ||| || || Sbjct 69531 GAGAGCCCTCGTAGGTTGAGTA---CGTACCCTCAATTTGAGAGATCTCGCAAGACGCCT 69475 Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG 204529 ||| ||| | ||| |||||||||||||||||| ||| ||| ||||| Sbjct 69474 CCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAAT-TGGCG 69426 >seq46 Length=146035 Score = 129 bits (142), Expect = 9e-25 Identities = 536/832 (64%), Gaps = 23/832 (3%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | || || |||||||| |||| ||||| Sbjct 141526 CTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 141585 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | ||| |||| || || || | || | | ||| || || || || Sbjct 141586 GGAAGCCTTGTAGACCTTCTCGTTACCAAGGGCAACGAGAAGACGGTCGGCAACGAACTC 141645 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| | ||| | ||| ||| || || || || | ||| || || || | Sbjct 141646 GATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGGCACAGGGCAGGGCCTCGGT 141705 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT-CGTACC 159887 || |||||||||||||| |||| || ||||| | || | | || ||| | | | Sbjct 141706 AAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATTTCCTGGATCAGTTGCTTGCT 141765 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| ||| || ||| ||| |||||| ||||||||| ||| || || Sbjct 141766 AGGGCGGTTGT------TGAGGTGAGAGTACAAGAGGCAGGCAAAGTCGGTGTGAAGACC 141819 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| ||||| || | ||| ||||| | | ||||| ||||||| |||||| || Sbjct 141820 CTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCATGAGACCACGC---TT 141876 Query 160006 GAGC---CAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062 | || || || |||| ||||| |||||| || ||||| ||||| ||||||||||| Sbjct 141877 GCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATACCCTCGACGGCCGCAAA 141936 Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122 || ||||| | || | |||| | || | |||| ||||| | |||||| || Sbjct 141937 AGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCGGCAATCCACTTCAGGGCCCAATC 141996 Query 160123 AGCCTTCTTTGCG-ATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCC 160180 ||||| ||| ||||| || ||| || | ||||||||| | || || | ||| Sbjct 141997 GGCCTT-GCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGATAAGTGC-GCTGG 142054 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 |||||||| |||| |||||||| ||||| | || | ||| | || || Sbjct 142055 GCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGTGAATGTTCTCC 142114 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || ||||| || |||||| | ||||| || ||| ||||| | || Sbjct 142115 ATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGAACCTCAGCGGAAAAG 142174 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | | | | || || | || || | || || | || ||||||||||| | | |||| Sbjct 142175 CGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAGAAAGCGAGAATGTGA 142234 Query 160361 GAGATGAAATGTCT-CTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGG 160418 ||||| ||| || ||| || ||||| | | || | ||||| ||| | || | | Sbjct 142235 GAGAT-AAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTG-AAGATCCTTAG 142292 Query 160419 CCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470 || ||||| ||| || || |||| | ||||| || | |||||||| Sbjct 142293 ACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCCTCGGCCTTCTTGTACAT 142344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148799000640