Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq116 205 1e-47
seq46 129 9e-25
>seq116
Length=85249
Score = 205 bits (226), Expect = 1e-47
Identities = 440/650 (68%), Gaps = 11/650 (2%)
Strand=Plus/Minus
Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944
||||| |||||||||||||| || ||| || ||||||| | ||||||| | |
Sbjct 70069 AGATAATACATGCCGGTCTTAAGACCCAGCTTCCACCCGGTGAAGTGCATGCTGGTAATC 70010
Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004
|||| || | ||||||| |||||| || || || ||||| ||| ||||||||||
Sbjct 70009 TTGCCCATGGTGGGGTCCTTCATGTGGATATTAAGGGACTGAGATTGATCGATGAAAGCA 69950
Query 204005 GCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAAC 204064
| ||||| || ||||| | | || ||| ||| ||||| |||||||| |||||| ||
Sbjct 69949 CCACGATCGGCAGCCATCTGAACAACGGTACGCTGAGAAATTTCCCACACAGTCTTGTAC 69890
Query 204065 ACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCAT 204123
| | || | | ||| | | || | || ||| | || ||||||||||| ||
Sbjct 69889 AGAGCCTTGATATCAGCAGGAATA-CTGGGGATGTTTTGAATGGAACCGTTGTCGGCAAT 69831
Query 204124 CAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTG 204183
| | || || | | || ||||| ||| | || ||| || || | ||
Sbjct 69830 GATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCGACCAGATCGCGGAGCAACCA 69771
Query 204184 GGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAA 204243
||||| | | ||| || || || | ||| || | || | | | |||| |||| |
Sbjct 69770 CGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTA 69711
Query 204244 TGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGC 204303
||||||||| |||||||||||| | |||||| | || ||||| || |||||||||||
Sbjct 69710 TGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGC 69651
Query 204304 CAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGT 204362
||||| || |||||||| ||||||| || | || |||| ||| ||||| |||||||
Sbjct 69650 AAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGA-TCTGCTCCTTAAGAGAAGTCCAGT 69592
Query 204363 CGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTG 204422
| | ||||||| | ||| ||||||| || ||||| | ||| || || ||| |
Sbjct 69591 CCCAAAGGTCACTGGGGGTGACGTCCCACATATCAAACTGGAGGATACCCTGGGAGACGG 69532
Query 204423 GGCTGCCCTTGTACGTCGGATAAGGCTGATCCTC---TTCTGCCAGCTTGCACGAGGCGG 204479
| ||||| ||| || | || | | |||| || | | || ||| || ||
Sbjct 69531 GAGAGCCCTCGTAGGTTGAGTA---CGTACCCTCAATTTGAGAGATCTCGCAAGACGCCT 69475
Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG 204529
||| ||| | ||| |||||||||||||||||| ||| ||| |||||
Sbjct 69474 CCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAAT-TGGCG 69426
>seq46
Length=146035
Score = 129 bits (142), Expect = 9e-25
Identities = 536/832 (64%), Gaps = 23/832 (3%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | || || |||||||| |||| |||||
Sbjct 141526 CTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 141585
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| | ||| |||| || || || | || | | ||| || || || ||
Sbjct 141586 GGAAGCCTTGTAGACCTTCTCGTTACCAAGGGCAACGAGAAGACGGTCGGCAACGAACTC 141645
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| | ||| | ||| ||| || || || || | ||| || || || |
Sbjct 141646 GATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGGCACAGGGCAGGGCCTCGGT 141705
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT-CGTACC 159887
|| |||||||||||||| |||| || ||||| | || | | || ||| | | |
Sbjct 141706 AAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATTTCCTGGATCAGTTGCTTGCT 141765
Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
||| ||| || ||| ||| |||||| ||||||||| ||| || ||
Sbjct 141766 AGGGCGGTTGT------TGAGGTGAGAGTACAAGAGGCAGGCAAAGTCGGTGTGAAGACC 141819
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
|||||| ||||| || | ||| ||||| | | ||||| ||||||| |||||| ||
Sbjct 141820 CTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCATGAGACCACGC---TT 141876
Query 160006 GAGC---CAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062
| || || || |||| ||||| |||||| || ||||| ||||| |||||||||||
Sbjct 141877 GCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATACCCTCGACGGCCGCAAA 141936
Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122
|| ||||| | || | |||| | || | |||| ||||| | |||||| ||
Sbjct 141937 AGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCGGCAATCCACTTCAGGGCCCAATC 141996
Query 160123 AGCCTTCTTTGCG-ATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCC 160180
||||| ||| ||||| || ||| || | ||||||||| | || || | |||
Sbjct 141997 GGCCTT-GCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGATAAGTGC-GCTGG 142054
Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240
|||||||| |||| |||||||| ||||| | || | ||| | || ||
Sbjct 142055 GCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGTGAATGTTCTCC 142114
Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300
|| ||||| || |||||| | ||||| || ||| ||||| | ||
Sbjct 142115 ATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGAACCTCAGCGGAAAAG 142174
Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360
| | | | || || | || || | || || | || ||||||||||| | | ||||
Sbjct 142175 CGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAGAAAGCGAGAATGTGA 142234
Query 160361 GAGATGAAATGTCT-CTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGG 160418
||||| ||| || ||| || ||||| | | || | ||||| ||| | || | |
Sbjct 142235 GAGAT-AAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTG-AAGATCCTTAG 142292
Query 160419 CCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470
|| ||||| ||| || || |||| | ||||| || | ||||||||
Sbjct 142293 ACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCCTCGGCCTTCTTGTACAT 142344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795148799000640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |