Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq51 176 6e-39
seq124 174 2e-38
seq21 125 9e-24
seq116 82.4 1e-10
>seq51
Length=140864
Score = 176 bits (194), Expect = 6e-39
Identities = 280/399 (70%), Gaps = 2/399 (1%)
Strand=Plus/Plus
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
||||||||||||||||| || || || ||||| | ||||| || |||||||| | ||
Sbjct 92405 TCTTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCGTCCTCG 92464
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | | | ||||||||| || ||||||||||| || || || || || |||||
Sbjct 92465 ATGGTAAGAAGCGAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTGCGC 92524
Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642
|| | || ||||| || |||||||| || || || || || || || || || ||
Sbjct 92525 TCACCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTGATG 92584
Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA-TCTTTCGTCGCTTGTCGTTGCGA 7701
||||| || ||| ||||| ||||| | ||| | || || || ||||| || || ||
Sbjct 92585 ATACGGAGGACGTTAAGGCCGGCAAT-GAGACCGGAGTCCTTGGTGGCTTGACGCTGAGA 92643
Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761
||||| |||||||| || || || | || |||| | || | |||| || || ||
Sbjct 92644 GTCGTTGAAGTAGGCGGGAACAGTGATAACAGCGTTGTTAACGGTGGTACCAAGGTAAGA 92703
Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821
|| || | || ||| ||| | || ||||| || || ||||| |||| | |||||
Sbjct 92704 CTCAGCAGTCTCGCGCATCTTGATCAGGACCATGGAGGAGATCTCCTCAGGGGTGAACTG 92763
Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
|| || ||||| || || || || ||||| | ||| ||
Sbjct 92764 CTTGGTCTCACCCTTGAACTCGACCTCAATGACGGGCTT 92802
Score = 122 bits (134), Expect = 1e-22
Identities = 548/866 (63%), Gaps = 7/866 (1%)
Strand=Plus/Plus
Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627
|||||| || || || ||||| || || || | ||| || || || || || ||
Sbjct 91346 TTCATCCTCCTCCTTGTACTTCTCGGCCTCGGAAAGCATGCGCTCGATCTCCTCCTTGGA 91405
Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687
| | ||||| || || ||||| |||||| | ||| || || | |||| ||
Sbjct 91406 CAGACGACCCTTGTCGTTGGTAATGACAATCTTGTTGGACTTGCCAGTACCCTTCTCAAG 91465
Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747
||| || |||| ||||| || ||||| | |||||| | || | ||| || ||
Sbjct 91466 GGCAGAGACGTTCATGATACCGTTGGCATCCAGATCGAAGGTGACCTCAATCTGGGGAAC 91525
Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807
||| | || |||| |||||||| || | || || | || | || ||||| ||| |
Sbjct 91526 ACCACGGGGAGCGGGGGGAATACCAGTGAGCTCGAACTTGCCCATCAAGCTGTTGTCCTT 91585
Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGT 6865
| || || ||||| || ||||| | ||| | ||||| || || || ||
Sbjct 91586 GGTGCGCTGGCGCTCACCCTCGTAGACCTGAATCAGGACACCG--GGCTGGTTGTCAGAG 91643
Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925
|| ||||||| | ||||| | || || || || || | ||||| | | |
Sbjct 91644 AAGGTAGAGAAGACCTCAGACTTCTTGGTGGGGATAGTGGTGTTGCGGGGAATGAGCTTG 91703
Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985
||||| |||||||| ||| |||| || || || || || | || || | || |
Sbjct 91704 GTCATCATACCACCAGCAGTCTCGATACCGAGGGAAAGGGGCGCGACATCGAGCAGAAGG 91763
Query 6986 AGGTCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042
| || | | | ||| ||||| | | |||||||| ||||| | ||
Sbjct 91764 ATCTCGTTGGTGGTCTTGTTGGAGGTGTCACCGGACAGAATGGCGGCCTGGACGGCAGCA 91823
Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102
||||| ||||| |||||||||||||| || | || || | || || ||||| || ||
Sbjct 91824 CCGTAGGCGACGGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAG 91883
Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162
|| || | | | || || || || || || || |||||||| | || || ||
Sbjct 91884 TCGGAAATGAGCTTCTGGATGCGGGGAATACGGGTGGAACCACCGACAAGGACAATCTCG 91943
Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222
| || || || |||||||| | || | || ||||| || | |
Sbjct 91944 TGGACGAGGGACTTGTCGATCTTGGCATCCTGGAGGACACGGTCGACGGGCTGGAGGGTG 92003
Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282
||||| | ||| || || ||||| ||||| |||||||| || || || |||||
Sbjct 92004 GAGCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATAGAGGTGTAGAAG 92063
Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTT 7342
|| | || ||| | | || || || || || | || || || | || || | ||
Sbjct 92064 TCGATACCCTCGAACAGAGAGTCGATCTCGATCGAGGTCTGGGCGGAGGAGGAAAGAGTA 92123
Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402
||||| || ||||| || || || || | ||||||||||||||| | ||| ||| |
Sbjct 92124 CGCTTGGCACGCTCGCAAGCAGTGCGGAGACGACGAAGGGCACGAGCGTTGGAGGACAGG 92183
Query 7403 TCTTTCTTATGTTTACGTTTAAACTC 7428
|| ||||| || || || || |||||
Sbjct 92184 TCCTTCTTGTGCTTGCGCTTGAACTC 92209
>seq124
Length=79758
Score = 174 bits (192), Expect = 2e-38
Identities = 353/518 (68%), Gaps = 11/518 (2%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAAT--GGATG-TATAGAAATCAACGCCGTCGTATAAC 7300
|| ||||| ||||| |||||||| || ||| | | ||| ||| || ||| | |
Sbjct 65115 AGCTCCTCGAAACGGGCACGGGTGATCTGGACGGTGTAGTCCTCA---CCATCGAAGAGA 65059
Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360
|| ||||| || ||||| || || || ||||| | || ||||| || ||||| ||
Sbjct 65058 GAGTCAATCTCGATGGTGGTCTGGGCACCGGAAGACAGGGTACGCTTCGCACGCTCGCAA 64999
Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420
|| || || | |||||| || ||||| | | |||||||| ||| ||||| || ||
Sbjct 64998 GCGGTACGGAGACGACGGAGAGCACGGGCATCACCGGAAAGATCCTTCTTGGTCTTGCGG 64939
Query 7421 TTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479
| || || | | |||| |||| | || | | |||||||| | |||||||| |||
Sbjct 64938 GTGAAGTCCTTCTTGCAGTGGTCGA-GCAGGTTAGTGTCGAAATCCTGACCACCCAGGTG 64880
Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539
||||| || | ||| || ||||| |||| ||| || | ||||| | || || ||
Sbjct 64879 AGTATCACCAGAGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGCAGGGAGAC 64820
Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTT 7596
||| || |||||||||||||| || | || || ||||| | | |||| |||
Sbjct 64819 ATCGAAAGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTCGGACTTGCC 64760
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
| | |||||||| || || || || || || || || || || ||||| || |||
Sbjct 64759 GGCACCAAGACCGTAGGCAATGGCGGCAGCAGTGGGCTCGTTGATGATACGGAGGACGTT 64700
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
|||||||||||| | | || || || || || || || || ||||| ||||||||
Sbjct 64699 CAGGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGC 64640
Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
||||| || | ||| || | | || ||||| ||||
Sbjct 64639 GGGGACAGTGATGACAGCCTTCTCAACCTTCTTGCCGA 64602
>seq21
Length=205208
Score = 125 bits (138), Expect = 9e-24
Identities = 242/356 (68%), Gaps = 6/356 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | ||| ||||| || || || || || ||||||| |||
Sbjct 121224 TCGAAATCCTCACCACCAAGGTGAGTATCACCGGCAGTGGCCAGAACCTCAAAGACACCA 121283
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT 7573
|| || | | || |||||||| ||||||||||| || || | |||||
Sbjct 121284 GACTCGATAGACAGAAGGGAGACATCAAAAGTACCACCACCGAGATCGTAGACAATGATC 121343
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | | || |||| |||| || |||||||| ||||| || || || || ||
Sbjct 121344 TGGCGCTCACCGGCGTC---AGTCTTGTCCAGACCGTAAGCGATGGCAGCGGCGGTGGGC 121400
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | |||||| || ||| || || ||||| || | || || || || || ||
Sbjct 121401 TCGTTGACAATACGGAGGATGTTAAGACCGGCAATGGTACCGGCGTCCTTGGTAGCCTGA 121460
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| || || || || || |||| ||||| |||| |||
Sbjct 121461 CGCTGGGCGTCGTTGAAGTAGGCGGGAACAGTGACAACGGCGTGGGTGACAGTCTTGCCG 121520
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || |||| || ||||| ||| || | ||| | |||| ||| ||
Sbjct 121521 AGGTAGGACTCAGCGACTTCCTTCATCTTGCCGAGGATCATGGCAGAAACCTCCTC 121576
>seq116
Length=85249
Score = 82.4 bits (90), Expect = 1e-10
Identities = 130/185 (70%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 105814 GCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT---ACTGATACGCGCA 105870
||||| | | |||||||| | |||||||| || ||| ||| | | ||| |||
Sbjct 68620 GCACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATA---GCA 68564
Query 105871 CACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAA 105930
|| || | ||||| || ||||| || || || || ||||| | ||| ||||||
Sbjct 68563 CAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAG 68504
Query 105931 CACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATG 105990
||||| || | || | ||| |||||||||||||||||||| || | ||||||| ||
Sbjct 68503 CACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTG 68444
Query 105991 AACAA 105995
|| ||
Sbjct 68443 AAGAA 68439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635127687180960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |