Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq116 194 2e-44
seq46 116 5e-21
seq95 111 2e-19
seq260 104 3e-17
>seq116
Length=85249
Score = 194 bits (214), Expect = 2e-44
Identities = 714/1102 (65%), Gaps = 31/1102 (3%)
Strand=Plus/Plus
Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962
||||| || ||| || | ||||| |||| ||||| || || || ||| ||| ||
Sbjct 68640 GGTACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCC 68699
Query 111963 CGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016
|| ||||| |||| | ||| ||||| | || || | || | |||||||||
Sbjct 68700 CGTTATGTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCTTTTGCTATTTATCTTGAG 68756
Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076
|| ||||| || || | | |||||||| || | || || || || | ||||||
Sbjct 68757 CCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAG 68816
Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136
| || ||| ||||| ||| ||||| ||||| || ||||| ||||||||| | ||
Sbjct 68817 GTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATT 68876
Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196
||| ||| ||| | ||| |||| | || || || || || || || | || |
Sbjct 68877 GAGAAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGC 68936
Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG--CGACTG 112254
|| || || || || || || ||| ||||| || | || |||| | || ||
Sbjct 68937 TACGGCGATGAATTCGAGGCTCTGTACGAGAAGTATGAAAAGGAGGGTCGTGGCCGTCTA 68996
Query 112255 CGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313
|| | ||| | || | | ||| | || ||||| || | ||||||||||| ||
Sbjct 68997 --ACCATTAAGGCT-CAGAAGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGA 69053
Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373
| || | ||| | ||||| ||| || |||| ||||| || || |||||| |||||
Sbjct 69054 AACCCCTTCATGTTGTACAAGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGT 69113
Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433
||| || |||||||| || || || || | || | | | ||||||
Sbjct 69114 ACCATCCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTT 69173
Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGAC 112492
||||| || ||||| || || | ||||||||| || ||| || | || |||| |
Sbjct 69174 GCTGTTTGCAACCTTGCCTCCTTGGCTCTCCCCGCGTTTGTTGACTACACCAACAACT-C 69232
Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552
|| || | | || || ||||| || || || ||| ||| | ||| | |
Sbjct 69233 ATACGACTTCCAGAAGCTGCACGAGGTCACCAAGGTTGTTGTTCGCAACTTGAACCGCAT 69292
Query 112553 TATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCG 112609
||||| || ||||||||| ||| || | | | | || ||| | |||||
Sbjct 69293 CATTGACGTCAACCACTACCCCGTTCCCGAGGCT--TACAACAGC-AACATGCGCCACCG 69349
Query 112610 TCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCAT 112668
||| |||||| | ||||| || ||||| || |||| ||| | || || ||| | |
Sbjct 69350 TCCCATTGGTGTGGGTGTTCAGGGTCTTGCTGATGCCTTCCTAGCTCTG-CGCATGCCCT 69408
Query 112669 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCG 112728
|||| || | ||||| || | || | | || |||||||| || || |||||||
Sbjct 69409 TTGAGTCAGCTGAAGCTCGCCAATTGAACACTCAGATCTTTGAGACCATTTACCACGCCG 69468
Query 112729 CTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788
|||| |||||| || ||| | | | |||| ||| | || ||||| ||||| |
Sbjct 69469 CTCTGGAGGCGTCTTGCGAGATCTCTCAAATTGAGGGTACGTACTCAACCTACGAGGGCT 69528
Query 112789 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC- 112847
|||| | || || || | || || ||||||||||||| | || | || || | ||
Sbjct 69529 CTCCCGTCTCCCAGGGTATCCTCCAGTTTGATATGTGGG-ACGTCACCCCCAG--TGACC 69585
Query 112848 --TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 112905
| |||||| |||| ||||| | |||||| |||| ||| |||| ||| ||||
Sbjct 69586 TTTGGGACTGGACTTCTCTTAAGGAGCAGATCAAGAAGAACGGTGTTCGCAACTCTCTTC 69645
Query 112906 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 112965
| | || || ||||| || ||| || | || || |||| || || || ||||| |
Sbjct 69646 TCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTCTGGGCAACAACGAGTGCTTCG 69705
Query 112966 AACCCTACACGACGAACATCTA 112987
|||| ||||| | ||||||||
Sbjct 69706 AACCATACACCTCCAACATCTA 69727
>seq46
Length=146035
Score = 116 bits (128), Expect = 5e-21
Identities = 173/243 (71%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149
|||||| | ||||| | || |||| || |||| || || |||||||| |||||
Sbjct 142041 CTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGCCGATTGGGCCCTGAAG 141982
Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208
||| ||| |||| | | |||||||| |||| ||| | || |||||| || ||
Sbjct 141981 TGGATTGCCGACAAGGAATCCA-CCTTTGCTCAGCGCCTCGTTGCTTTTGCGGCCGTCGA 141923
Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268
||||||||||||||| ||| |||| | | || | ||| | ||||| ||||||||
Sbjct 141922 GGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCGCAAGCGTGGTCTCAT 141863
Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328
||| || || || ||||| ||||| || |||||||||||||| || ||| || ||
Sbjct 141862 GCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGACGAGGGTCTTCACACCGACTT 141803
Query 102329 TGC 102331
|||
Sbjct 141802 TGC 141800
>seq95
Length=100549
Score = 111 bits (122), Expect = 2e-19
Identities = 173/246 (70%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 176018 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 176077
||||| |||||| ||||| | |||||| | ||||| ||||| ||| |||| |
Sbjct 78922 GCATCGGAACCACCAGCAAGACGAGAACCAAAGTTACCACTGGGCTCCAGACAGTTGACA 78981
Query 176078 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCA 176137
||||| ||||| | |||| | ||| | || |||||| | | || || |||||
Sbjct 78982 TTGTTGGAACCGACAAAGTCCTGCGCAAGACCGATAATCGTTTGCTGCAGGGAAGCTTCA 79041
Query 176138 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 176197
||||| |||||||| | | | | ||| | | ||||||| | | || ||||| |
Sbjct 79042 CCGTGTTGGTACGCGGTTTGACCCGAGACGTAACCAGCCAACTCCACAACCTTCAT---A 79098
Query 176198 TCCTTGAGATTCTTG---TGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGA 176254
||||||| | | ||| | |||||| |||||||| || |||||||| ||||||||||
Sbjct 79099 TCCTTGACAATGTTGCTCTTGAAACAGGCGTACATGACTTTGCGTTGACCAGGCTTGAGA 79158
Query 176255 CCATCC 176260
||||||
Sbjct 79159 CCATCC 79164
>seq260
Length=29797
Score = 104 bits (114), Expect = 3e-17
Identities = 214/316 (68%), Gaps = 2/316 (1%)
Strand=Plus/Plus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124
|||||||||||||||||||||| ||||| || ||| | || || | || |||
Sbjct 13887 GCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAGA 13946
Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183
|| || |||||| | || ||||||||||||||||| || || | || | || |||
Sbjct 13947 TCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACACA 14006
Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243
| || ||| || || ||| || || || | || ||| || | |||||||| ||
Sbjct 14007 CT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGGT 14065
Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 16303
||| || |||| || | |||||| || ||||||||||| || | | | | |
Sbjct 14066 ACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACTT 14125
Query 16304 CTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 16363
||| |||| |||||| || | |||| ||| | ||| | || || |||| || ||
Sbjct 14126 CTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCATGCC 14185
Query 16364 CTCAACATCGGTAAAC 16379
| ||||||| ||||
Sbjct 14186 GGCGACATCGGCAAAC 14201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620737403023680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |