Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq116 194 2e-44 seq46 116 5e-21 seq95 111 2e-19 seq260 104 3e-17 >seq116 Length=85249 Score = 194 bits (214), Expect = 2e-44 Identities = 714/1102 (65%), Gaps = 31/1102 (3%) Strand=Plus/Plus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| || ||| || | ||||| |||| ||||| || || || ||| ||| || Sbjct 68640 GGTACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCC 68699 Query 111963 CGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 || ||||| |||| | ||| ||||| | || || | || | ||||||||| Sbjct 68700 CGTTATGTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCTTTTGCTATTTATCTTGAG 68756 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| || || | | |||||||| || | || || || || | |||||| Sbjct 68757 CCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAG 68816 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | || ||| ||||| ||| ||||| ||||| || ||||| ||||||||| | || Sbjct 68817 GTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATT 68876 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 ||| ||| ||| | ||| |||| | || || || || || || || | || | Sbjct 68877 GAGAAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGC 68936 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG--CGACTG 112254 || || || || || || || ||| ||||| || | || |||| | || || Sbjct 68937 TACGGCGATGAATTCGAGGCTCTGTACGAGAAGTATGAAAAGGAGGGTCGTGGCCGTCTA 68996 Query 112255 CGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 || | ||| | || | | ||| | || ||||| || | ||||||||||| || Sbjct 68997 --ACCATTAAGGCT-CAGAAGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGA 69053 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 | || | ||| | ||||| ||| || |||| ||||| || || |||||| ||||| Sbjct 69054 AACCCCTTCATGTTGTACAAGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGT 69113 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 ||| || |||||||| || || || || | || | | | |||||| Sbjct 69114 ACCATCCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTT 69173 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGAC 112492 ||||| || ||||| || || | ||||||||| || ||| || | || |||| | Sbjct 69174 GCTGTTTGCAACCTTGCCTCCTTGGCTCTCCCCGCGTTTGTTGACTACACCAACAACT-C 69232 Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552 || || | | || || ||||| || || || ||| ||| | ||| | | Sbjct 69233 ATACGACTTCCAGAAGCTGCACGAGGTCACCAAGGTTGTTGTTCGCAACTTGAACCGCAT 69292 Query 112553 TATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCG 112609 ||||| || ||||||||| ||| || | | | | || ||| | ||||| Sbjct 69293 CATTGACGTCAACCACTACCCCGTTCCCGAGGCT--TACAACAGC-AACATGCGCCACCG 69349 Query 112610 TCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCAT 112668 ||| |||||| | ||||| || ||||| || |||| ||| | || || ||| | | Sbjct 69350 TCCCATTGGTGTGGGTGTTCAGGGTCTTGCTGATGCCTTCCTAGCTCTG-CGCATGCCCT 69408 Query 112669 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCG 112728 |||| || | ||||| || | || | | || |||||||| || || ||||||| Sbjct 69409 TTGAGTCAGCTGAAGCTCGCCAATTGAACACTCAGATCTTTGAGACCATTTACCACGCCG 69468 Query 112729 CTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 112788 |||| |||||| || ||| | | | |||| ||| | || ||||| ||||| | Sbjct 69469 CTCTGGAGGCGTCTTGCGAGATCTCTCAAATTGAGGGTACGTACTCAACCTACGAGGGCT 69528 Query 112789 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC- 112847 |||| | || || || | || || ||||||||||||| | || | || || | || Sbjct 69529 CTCCCGTCTCCCAGGGTATCCTCCAGTTTGATATGTGGG-ACGTCACCCCCAG--TGACC 69585 Query 112848 --TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 112905 | |||||| |||| ||||| | |||||| |||| ||| |||| ||| |||| Sbjct 69586 TTTGGGACTGGACTTCTCTTAAGGAGCAGATCAAGAAGAACGGTGTTCGCAACTCTCTTC 69645 Query 112906 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 112965 | | || || ||||| || ||| || | || || |||| || || || ||||| | Sbjct 69646 TCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTCTGGGCAACAACGAGTGCTTCG 69705 Query 112966 AACCCTACACGACGAACATCTA 112987 |||| ||||| | |||||||| Sbjct 69706 AACCATACACCTCCAACATCTA 69727 >seq46 Length=146035 Score = 116 bits (128), Expect = 5e-21 Identities = 173/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 |||||| | ||||| | || |||| || |||| || || |||||||| ||||| Sbjct 142041 CTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGCCGATTGGGCCCTGAAG 141982 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| ||| |||| | | |||||||| |||| ||| | || |||||| || || Sbjct 141981 TGGATTGCCGACAAGGAATCCA-CCTTTGCTCAGCGCCTCGTTGCTTTTGCGGCCGTCGA 141923 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||||| ||| |||| | | || | ||| | ||||| |||||||| Sbjct 141922 GGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCGCAAGCGTGGTCTCAT 141863 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| || || || ||||| ||||| || |||||||||||||| || ||| || || Sbjct 141862 GCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGACGAGGGTCTTCACACCGACTT 141803 Query 102329 TGC 102331 ||| Sbjct 141802 TGC 141800 >seq95 Length=100549 Score = 111 bits (122), Expect = 2e-19 Identities = 173/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 176018 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 176077 ||||| |||||| ||||| | |||||| | ||||| ||||| ||| |||| | Sbjct 78922 GCATCGGAACCACCAGCAAGACGAGAACCAAAGTTACCACTGGGCTCCAGACAGTTGACA 78981 Query 176078 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCA 176137 ||||| ||||| | |||| | ||| | || |||||| | | || || ||||| Sbjct 78982 TTGTTGGAACCGACAAAGTCCTGCGCAAGACCGATAATCGTTTGCTGCAGGGAAGCTTCA 79041 Query 176138 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 176197 ||||| |||||||| | | | | ||| | | ||||||| | | || ||||| | Sbjct 79042 CCGTGTTGGTACGCGGTTTGACCCGAGACGTAACCAGCCAACTCCACAACCTTCAT---A 79098 Query 176198 TCCTTGAGATTCTTG---TGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGA 176254 ||||||| | | ||| | |||||| |||||||| || |||||||| |||||||||| Sbjct 79099 TCCTTGACAATGTTGCTCTTGAAACAGGCGTACATGACTTTGCGTTGACCAGGCTTGAGA 79158 Query 176255 CCATCC 176260 |||||| Sbjct 79159 CCATCC 79164 >seq260 Length=29797 Score = 104 bits (114), Expect = 3e-17 Identities = 214/316 (68%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 |||||||||||||||||||||| ||||| || ||| | || || | || ||| Sbjct 13887 GCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAGA 13946 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183 || || |||||| | || ||||||||||||||||| || || | || | || ||| Sbjct 13947 TCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACACA 14006 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 | || ||| || || ||| || || || | || ||| || | |||||||| || Sbjct 14007 CT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGGT 14065 Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 16303 ||| || |||| || | |||||| || ||||||||||| || | | | | | Sbjct 14066 ACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACTT 14125 Query 16304 CTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 16363 ||| |||| |||||| || | |||| ||| | ||| | || || |||| || || Sbjct 14126 CTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCATGCC 14185 Query 16364 CTCAACATCGGTAAAC 16379 | ||||||| |||| Sbjct 14186 GGCGACATCGGCAAAC 14201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737403023680