Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq116 219 5e-52 seq260 111 2e-19 >seq116 Length=85249 Score = 219 bits (242), Expect = 5e-52 Identities = 1111/1745 (64%), Gaps = 63/1745 (4%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTT 109563 |||||||| ||||||||||| ||||||||| || ||||| | | | | ||| || Sbjct 69973 GACTGAGATTGATCGATGAAAGCACCACGATCGGCAGCCATCTGAACAACGGTACGCT-- 69916 Query 109564 TGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATG 109623 | ||||||||| ||||||||||||| | |||||||||| | ||||| |||| Sbjct 69915 -GAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATACTGGGGATG 69857 Query 109624 TTTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGA 109680 |||||||| || || | | || |||| | | |||||| | | ||||| || Sbjct 69856 TTTTGAATGGAACCGTT-GTCGGCA--ATGATACGGTTCTTCATGTTATCAGACCACAGG 69800 Query 109681 CCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736 || | | |||||| |||| | | ||| || || || |||||||| Sbjct 69799 CCAAGGTCGACCAGATCGCGGAGCAACCA----CGGGTTAACAACCTGGAACTCACCAGC 69744 Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796 || || || |||||||||| | ||||| |||||||| ||||| |||||||| || Sbjct 69743 CAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAG 69684 Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856 || || | ||| || || ||||||||||| | ||||||| ||| || | ||| || Sbjct 69683 AATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTT 69624 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACC 109916 | |||| | | |||| | | ||| || || | ||| | | | | | Sbjct 69623 CTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCAC-----TGGGGGTGA-C 69570 Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976 ||||||||||| || || | ||||| | | ||||| |||| | | | ||| Sbjct 69569 GTCCCACATATCAAACTGGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTA 69510 Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 || ||||||| | | | |||| | || ||||| || || || || || || ||||| Sbjct 69509 CGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTC 69450 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AA 110095 ||| || |||| |||| |||||| || | | || ||||| | | || || | Sbjct 69449 AAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAAGGGCA-TGCGCAGAGCTA 69391 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 || |||| || |||||||||||||| | ||||||||| || || |||||| || Sbjct 69390 GGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTT---GC 69334 Query 110156 -GTCG--AGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212 || | ||| |||||||| |||| ||| |||| || || | || Sbjct 69333 TGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAA 69274 Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACG---TTTTCGTCTCCTTAT 110269 ||| ||| |||| || || || || | | | ||| | | | || || | | | Sbjct 69273 CAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCA- 69215 Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329 ||| | ||||||||| | || ||||| ||||| |||| | ||| || | Sbjct 69214 --ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCAC 69157 Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 || || | ||| || || |||| |||||| || ||| ||||| |||||||| | Sbjct 69156 AATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGT 69097 Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | || |||||| ||||| || | |||| | ||| | || || || || || | Sbjct 69096 TGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGG 69037 Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGA-GACCTTC 110507 || |||||||| | ||| | | || | | | | | | | || | |||| || Sbjct 69036 CCTCCAGAATGGCATACCAGAGCTTCTGAGCC--TTAATGGTTAGACGGCCACGACCCTC 68979 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 || || ||||| ||||| |||| ||||| | ||||| |||| || || Sbjct 68978 CTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGG 68919 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || ||| || | || | ||| | ||| || ||||| | |||||||||||| Sbjct 68918 GCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAG 68859 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||||| ||||||| || ||| || |||||| ||| |||| || | || || || Sbjct 68858 ATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATT 68799 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||| || || | || || | | || | ||||| || || ||||| | ||| | Sbjct 68798 CTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAA 68739 Query 110748 GGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 | || ||| || |||||| |||||| || || ||| |||||||| | Sbjct 68738 AGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACG 68679 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGC 110864 |||||| |||| || || | || ||| || ||||| || || | || Sbjct 68678 GAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGC 68619 Query 110865 ACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACT 110923 ||| || ||| | | | ||||||||||||||| ||| ||| |||| | | Sbjct 68618 ACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGT 68559 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 || | | ||| |||| ||||| ||||| || |||| || ||| || ||||| | Sbjct 68558 CT-TCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACG 68500 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 |||| | ||| | | || || || |||||||| || || || | |||||| ||| | Sbjct 68499 AAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGA--A 68442 Query 111044 GACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGA 111099 || |||| ||||| |||||| || || || | | | | |||| | ||| | Sbjct 68441 GAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAAC--ACGCTCGACATTGTCACCCCAA 68384 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACA 111159 | |||| ||||| ||||||| ||| | || || || | | ||| ||||||| Sbjct 68383 ACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAA-- 68326 Query 111160 CGCTGAAGG---TAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCA 111216 ||| |||| || ||| |||||||||| |||||||| | | | ||||||| Sbjct 68325 -GCTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATCA 68267 Query 111217 CGATC 111221 || || Sbjct 68266 CGGTC 68262 >seq260 Length=29797 Score = 111 bits (122), Expect = 2e-19 Identities = 326/496 (66%), Gaps = 10/496 (2%) Strand=Plus/Plus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 ||||||||| || || | | | ||| | ||| |||| ||| | | ||| ||| | || Sbjct 13703 ATCGAAACGGCCCGGTCTCATCAAAGCCTTATCCAGAACATCCGCTCTGTTGGTACCCGC 13762 Query 11565 AATGACTACAATGCCAGTCT-CATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGA 11623 | || ||||| | ||| | ||| || || ||||| || || | || |||||| | Sbjct 13763 CAACACCACAAT-CTGCTCTGCCGTGTTAAAGCCATCCATCTCCGTCAAAATCTGGTTCA 13821 Query 11624 TCGTCTGTTCACGCTCATCGTTGGA---GGGCATACCACCTG---CCGAACGCTTCTTAC 11677 |||| || |||||||| ||| | ||| | || | | ||| | || Sbjct 13822 GCGTCGACTCCCGCTCATCATTGCCACCGCCCATTCTGTTTGAGTCTGTCCGCGACCGAC 13881 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737 | | || ||||||||||| ||||| | || ||||| || || ||| ||| Sbjct 13882 CAATCGCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGA 13941 Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797 | || ||||| |||||| || ||| ||||| || |||||||| ||||| | || ||| Sbjct 13942 ACAGATCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAG 14001 Query 11798 A-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 | |||||||| ||| || || |||||| ||||| | || || || | |||||| Sbjct 14002 ACACACTGAA-GAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTA 14060 Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916 || ||||| || | || | |||| ||| || || || ||||||||||| | | | Sbjct 14061 CCGGTACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACG 14120 Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976 | ||| || ||||| ||||| | |||| |||| || || |||| || ||| Sbjct 14121 AACTTCTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCC 14180 Query 11977 ATACCCTCAACATCGG 11992 || || | ||||||| Sbjct 14181 ATGCCGGCGACATCGG 14196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971258743200