Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq116 219 5e-52
seq260 111 2e-19
>seq116
Length=85249
Score = 219 bits (242), Expect = 5e-52
Identities = 1111/1745 (64%), Gaps = 63/1745 (4%)
Strand=Plus/Minus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTT 109563
|||||||| ||||||||||| ||||||||| || ||||| | | | | ||| ||
Sbjct 69973 GACTGAGATTGATCGATGAAAGCACCACGATCGGCAGCCATCTGAACAACGGTACGCT-- 69916
Query 109564 TGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATG 109623
| ||||||||| ||||||||||||| | |||||||||| | ||||| ||||
Sbjct 69915 -GAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATACTGGGGATG 69857
Query 109624 TTTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGA 109680
|||||||| || || | | || |||| | | |||||| | | ||||| ||
Sbjct 69856 TTTTGAATGGAACCGTT-GTCGGCA--ATGATACGGTTCTTCATGTTATCAGACCACAGG 69800
Query 109681 CCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736
|| | | |||||| |||| | | ||| || || || ||||||||
Sbjct 69799 CCAAGGTCGACCAGATCGCGGAGCAACCA----CGGGTTAACAACCTGGAACTCACCAGC 69744
Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796
|| || || |||||||||| | ||||| |||||||| ||||| |||||||| ||
Sbjct 69743 CAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAG 69684
Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856
|| || | ||| || || ||||||||||| | ||||||| ||| || | ||| ||
Sbjct 69683 AATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTT 69624
Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACC 109916
| |||| | | |||| | | ||| || || | ||| | | | | |
Sbjct 69623 CTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCAC-----TGGGGGTGA-C 69570
Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976
||||||||||| || || | ||||| | | ||||| |||| | | | |||
Sbjct 69569 GTCCCACATATCAAACTGGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTA 69510
Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036
|| ||||||| | | | |||| | || ||||| || || || || || || |||||
Sbjct 69509 CGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTC 69450
Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AA 110095
||| || |||| |||| |||||| || | | || ||||| | | || || |
Sbjct 69449 AAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAAGGGCA-TGCGCAGAGCTA 69391
Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155
|| |||| || |||||||||||||| | ||||||||| || || |||||| ||
Sbjct 69390 GGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTT---GC 69334
Query 110156 -GTCG--AGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212
|| | ||| |||||||| |||| ||| |||| || || | ||
Sbjct 69333 TGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAA 69274
Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACG---TTTTCGTCTCCTTAT 110269
||| ||| |||| || || || || | | | ||| | | | || || | | |
Sbjct 69273 CAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCA- 69215
Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329
||| | ||||||||| | || ||||| ||||| |||| | ||| || |
Sbjct 69214 --ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCAC 69157
Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389
|| || | ||| || || |||| |||||| || ||| ||||| |||||||| |
Sbjct 69156 AATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGT 69097
Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449
| || |||||| ||||| || | |||| | ||| | || || || || || |
Sbjct 69096 TGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGG 69037
Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGA-GACCTTC 110507
|| |||||||| | ||| | | || | | | | | | | || | |||| ||
Sbjct 69036 CCTCCAGAATGGCATACCAGAGCTTCTGAGCC--TTAATGGTTAGACGGCCACGACCCTC 68979
Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567
|| || ||||| ||||| |||| ||||| | ||||| |||| || ||
Sbjct 68978 CTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGG 68919
Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627
|| || ||| || | || | ||| | ||| || ||||| | ||||||||||||
Sbjct 68918 GCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAG 68859
Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687
||||| ||||||| || ||| || |||||| ||| |||| || | || || ||
Sbjct 68858 ATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATT 68799
Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747
||| || || | || || | | || | ||||| || || ||||| | ||| |
Sbjct 68798 CTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAA 68739
Query 110748 GGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804
| || ||| || |||||| |||||| || || ||| |||||||| |
Sbjct 68738 AGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACG 68679
Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGC 110864
|||||| |||| || || | || ||| || ||||| || || | ||
Sbjct 68678 GAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGC 68619
Query 110865 ACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACT 110923
||| || ||| | | | ||||||||||||||| ||| ||| |||| | |
Sbjct 68618 ACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGT 68559
Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983
|| | | ||| |||| ||||| ||||| || |||| || ||| || ||||| |
Sbjct 68558 CT-TCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACG 68500
Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043
|||| | ||| | | || || || |||||||| || || || | |||||| ||| |
Sbjct 68499 AAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGA--A 68442
Query 111044 GACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGA 111099
|| |||| ||||| |||||| || || || | | | | |||| | ||| |
Sbjct 68441 GAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAAC--ACGCTCGACATTGTCACCCCAA 68384
Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACA 111159
| |||| ||||| ||||||| ||| | || || || | | ||| |||||||
Sbjct 68383 ACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAA-- 68326
Query 111160 CGCTGAAGG---TAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCA 111216
||| |||| || ||| |||||||||| |||||||| | | | |||||||
Sbjct 68325 -GCTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATCA 68267
Query 111217 CGATC 111221
|| ||
Sbjct 68266 CGGTC 68262
>seq260
Length=29797
Score = 111 bits (122), Expect = 2e-19
Identities = 326/496 (66%), Gaps = 10/496 (2%)
Strand=Plus/Plus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
||||||||| || || | | | ||| | ||| |||| ||| | | ||| ||| | ||
Sbjct 13703 ATCGAAACGGCCCGGTCTCATCAAAGCCTTATCCAGAACATCCGCTCTGTTGGTACCCGC 13762
Query 11565 AATGACTACAATGCCAGTCT-CATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGA 11623
| || ||||| | ||| | ||| || || ||||| || || | || |||||| |
Sbjct 13763 CAACACCACAAT-CTGCTCTGCCGTGTTAAAGCCATCCATCTCCGTCAAAATCTGGTTCA 13821
Query 11624 TCGTCTGTTCACGCTCATCGTTGGA---GGGCATACCACCTG---CCGAACGCTTCTTAC 11677
|||| || |||||||| ||| | ||| | || | | ||| | ||
Sbjct 13822 GCGTCGACTCCCGCTCATCATTGCCACCGCCCATTCTGTTTGAGTCTGTCCGCGACCGAC 13881
Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737
| | || ||||||||||| ||||| | || ||||| || || ||| |||
Sbjct 13882 CAATCGCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGA 13941
Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797
| || ||||| |||||| || ||| ||||| || |||||||| ||||| | || |||
Sbjct 13942 ACAGATCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAG 14001
Query 11798 A-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856
| |||||||| ||| || || |||||| ||||| | || || || | ||||||
Sbjct 14002 ACACACTGAA-GAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTA 14060
Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916
|| ||||| || | || | |||| ||| || || || ||||||||||| | | |
Sbjct 14061 CCGGTACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACG 14120
Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976
| ||| || ||||| ||||| | |||| |||| || || |||| || |||
Sbjct 14121 AACTTCTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCC 14180
Query 11977 ATACCCTCAACATCGG 11992
|| || | |||||||
Sbjct 14181 ATGCCGGCGACATCGG 14196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971258743200
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