Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq116 197 2e-45 seq46 149 7e-31 seq260 95.1 1e-14 >seq116 Length=85249 Score = 197 bits (218), Expect = 2e-45 Identities = 1044/1649 (63%), Gaps = 45/1649 (3%) Strand=Plus/Minus Query 105752 ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGA 105811 ||||||||||| || ||| ||| |||||||||| | || ||| | ||| |||||| Sbjct 69910 ATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATACTGGGGATGTTTTGA 69851 Query 105812 ATTGAACCCCCCGCCTTGACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATC 105868 || ||||| | | | |||| | | |||||| | | ||||| || |||| Sbjct 69850 ATGGAACCGTTGTC---GGCAATGATACGGTTCTTCATGTTATCAGACCACAGGCCAAGG 69794 Query 105869 TTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTT 105928 | ||||| || | | ||| |||| | ||||| || || ||| | Sbjct 69793 TCGACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAGGACACGG 69734 Query 105929 CTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCG 105988 | | | |||||||| | ||||| ||||| ||||| || || || |||| || || | Sbjct 69733 CGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAA 69674 Query 105989 GTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATG 106048 || ||| || ||||| || || | | |||| ||| |||| ||| || | |||||| Sbjct 69673 GTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATC 69614 Query 106049 CGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAA 106106 | ||||| ||| | |||||| | | | | || || | || | |||||||||||| Sbjct 69613 TGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCA-CTGGGGGTGACGT-CCCACATATCAA 69556 Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166 | || || | || ||||| |||||| ||||| | || || | ||| | || Sbjct 69555 ACTGGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCTCAATTT 69496 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 || | || || ||||||||| | ||||| || ||||| |||||||| ||| | Sbjct 69495 GAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGT 69436 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACA-AAATAAATACATCCGCG 106285 ||| | |||||| |||| ||||| | | | ||| | | || |||| || Sbjct 69435 TCAATTGGCGAGCTTCAGCTGACTCAAA-GGGCATGCGCAGAGCTAGGAAGGCATCAGCA 69377 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC- 106344 ||||| |||||||||| |||||| || | ||| ||||| || || | | || ||| Sbjct 69376 AGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTT--GCTGTTG-TAAGCCTCG 69320 Query 106345 --AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 106402 |||||| || || |||||||| ||||| | || ||||| ||| ||| Sbjct 69319 GGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGGTG 69260 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAG---TGCGAGTCTCTTCATTGACATACTTTGGA 106459 | || || || || | | || | | || || | ||| ||| || || Sbjct 69259 ACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCA---ACAAACGCGGGG 69203 Query 106460 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 106519 || || | || || | ||||||||||| |||||| | | ||||| | ||| Sbjct 69202 AGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATACTCGATAATC 69143 Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTG 106579 || || |||| |||||| || || || |||| |||||| ||||| ||||| |||| Sbjct 69142 TCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTG 69083 Query 106580 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCC 106639 || |||||||| | |||| |||| | || ||||| || || | || ||||| || Sbjct 69082 CAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAATGGCA 69023 Query 106640 TTCCACA-CATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTT 106695 | ||| | | || | | || ||||| | |||| || |||||| || ||||| Sbjct 69022 TACCAGAGCTTCTGAGCCT----TAATGGTTAGACGGCCACGACCCTCCTTTTCATACTT 68967 Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 106755 ||| || || || || || || || ||| | || || || || || || Sbjct 68966 CTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGG 68907 Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815 || | |||| ||| | |||| || ||||| ||||||||||| || || || ||||| Sbjct 68906 GCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGATCAGGGATCCA 68847 Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 ||| | || ||||| | ||| |||| || | || || || || | || Sbjct 68846 CAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATTCTTGCGGAGATC 68787 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935 |||||||| | | || || ||||| ||||||||||| | || | || || | Sbjct 68786 GAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACC---GGG 68730 Query 106936 ACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989 |||| ||| | || | ||||| || || ||| ||| || || || ||||| || Sbjct 68729 ACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGG 68670 Query 106990 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 107049 || ||||| | || ||| || || || || ||| | || | | | Sbjct 68669 AACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACG 68610 Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 || | || | |||||||| || ||| ||| || || ||||| | | | || Sbjct 68609 GTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGT 68550 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 107169 |||||||||| | || ||| ||||| || | | |||||||| || | ||| Sbjct 68549 ATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCTG 68490 Query 107170 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--G 107227 || || |||||||||||||| || || || | ||| ||| ||| | | |||| Sbjct 68489 CGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGA--AGAACTTGCTA 68432 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 ||||| || ||| ||||||| ||| || | | || || | ||| | || Sbjct 68431 GACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCACCCCAAACGCCAACAGCA 68372 Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAG 107347 |||||||| | ||||| ||||| || | | ||||||| ||| | |||||| Sbjct 68371 ACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAAGCTTAAGGAGATAG 68312 Query 107348 CTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 ||| ||||| |||| |||||||| Sbjct 68311 GAACGCTCCAGGGTCTTGAAGCCAAAGTA 68283 >seq46 Length=146035 Score = 149 bits (164), Expect = 7e-31 Identities = 538/831 (65%), Gaps = 53/831 (6%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| ||| |||| |||||| ||||| Sbjct 141512 TAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATG 141571 Query 117046 AAGTCAAATGGATT---------------CTTCGCGTTCCAAATGGGTGGCACCCCAACT 117090 ||||| || || || |||| |||| | || || |||| Sbjct 141572 AAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACCAAGGG---------CAAC- 141621 Query 117091 TGTTTGAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATA 117150 ||| ||||| || | || |||| |||||| ||| |||| ||||||| Sbjct 141622 -----GAGAAGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATA 141676 Query 117151 CCGATGAGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCT 117210 |||| || ||| || || || || | |||| | |||||||| | || || || Sbjct 141677 CCGAGAAGGGCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCG 141736 Query 117211 TTCACGATGGCGTGGAT-AGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGC 117267 | | ||| | ||||| |||| | | ||| | | | || | || | ||||| Sbjct 141737 GTGATGATTTCCTGGATCAGTTGCTTGCTAGGGCGGTTGTTGAGGTGAGAGTACAAGAGG 141796 Query 117268 TCCACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCAT 117327 || |||||| || ||| |||||||| || || ||||| || ||||| || || Sbjct 141797 --CA-GGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTC 141853 Query 117328 AGGCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAG 117387 ||||| ||||||||||| ||||| |||||| | || | | || | ||||||||| Sbjct 141854 AGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAG 141913 Query 117388 AAGATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT- 117446 ||||||||||| || |||||| |||| ||||||| || |||| | || | |||| Sbjct 141914 AAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTG-GATTCCTTGTC 141972 Query 117447 GTCAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 | ||| ||| |||| ||||| | ||||| ||| || || | || | ||||| Sbjct 141973 GGCAATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGC 142032 Query 117507 TTCAA----ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTG 117562 | || |||| ||| || | | ||||| ||||| | ||||||| | Sbjct 142033 GTTAAAGAGATAAGTGC-GCTGGGCGG---GCTCCTTGATGTAAGTATCAATCAGCAGGG 142088 Query 117563 AATATGTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCT 117621 | || || || |||| | | ||| ||| | || | ||||||| |||| || Sbjct 142089 AGTAGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCAGCGAGCC 142147 Query 117622 TCGCTTATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCG 117681 ||| | ||| || ||| | | ||| | | | ||||| ||||| ||||| Sbjct 142148 TCGGGAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCA 142207 Query 117682 GACCCAGCAAAGAATGCCAGGATGT---ACTTTATGAATTTCTTTTCATT-TTCATTCAG 117737 || |||||||||| || || |||| | | | ||| | || || || ||||| | | Sbjct 142208 GAAGCAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGC-G 142266 Query 117738 GGTCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 | | |||||||||| |||||| || |||| ||||| || || |||||||| Sbjct 142267 GTTGTTCCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 142317 >seq260 Length=29797 Score = 95.1 bits (104), Expect = 1e-14 Identities = 212/316 (67%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 |||||||||||||||||||||| ||| || || ||| | || || | | || ||| Sbjct 13887 GCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAGA 13946 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490 || ||||| | | || ||||||||||||||||| || || | || | || ||| Sbjct 13947 TCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACACA 14006 Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 | || ||| || || ||| || || || | || ||| || | |||||||| || Sbjct 14007 CT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGGT 14065 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9610 ||| || |||| || | |||||| || ||||||||||| || | | | | | Sbjct 14066 ACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACTT 14125 Query 9611 CTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 9670 ||| |||| ||| || || | |||| ||| | ||| | || || |||| || || Sbjct 14126 CTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCATGCC 14185 Query 9671 CTCAACATCGGTAAAC 9686 | ||||||| |||| Sbjct 14186 GGCGACATCGGCAAAC 14201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976050654560