Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq116 273 4e-68 seq46 143 5e-29 >seq116 Length=85249 Score = 273 bits (302), Expect = 4e-68 Identities = 901/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 ||||| || | |||||| ||||| | || || | | |||||| | ||| || ||||| Sbjct 69769 GGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTAT 69710 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || |||| || ||||||||| ||||||||||| | ||| ||||| || ||||||||||| Sbjct 69709 GGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCA 69650 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || ||| ||| | || |||| || ||| | | ||| | ||||||| Sbjct 69649 AGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCC 69590 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || ||||| | | |||| |||||| |||||||| | ||| || | | Sbjct 69589 CAA---------AGGTCACTGGGGGTGACGTCCCACATATCAAACTGGAGGATACCCTGG 69539 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTG-GCCAGCTCGCAGGA 213205 ||||| ||||| ||| | ||||| | || | | ||| | | |||||| || Sbjct 69538 GAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCT-CAATTTGAGAGATCTCGCAAGA 69480 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 ||||| ||| || |||| ||| ||||| ||||| |||| |||| | | || || Sbjct 69479 CGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATTGGCGAGCTTC 69420 Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 | ||| |||||||| || | |||| ||||||| || ||||| || || | Sbjct 69419 AGCTGACTCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCAC 69360 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 || ||||| | ||| | || ||| ||| | ||| | |||||| |||| Sbjct 69359 ACCAATGGGACGGTGGCGCATGTTGCTGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGAC 69300 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTG 213445 ||| ||||| ||| | |||||| | || |||||||| | | ||| | || | Sbjct 69299 GTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAA 69240 Query 213446 ATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCA 213505 | | | || | || | |||||| | || || || | | ||| |||||||| Sbjct 69239 GTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCA 69180 Query 213506 AACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCG 213565 ||| || ||||| | || | ||||| || ||||| |||||||||||| || || Sbjct 69179 AACAGCAACCTCATCAGGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCG 69120 Query 213566 GATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTA 213625 |||||| ||||| |||| ||||| ||| |||| | |||||||| | |||| | Sbjct 69119 GATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAA 69060 Query 213626 GGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTG 213683 |||| |||||||| |||| | |||| || ||| |||||| | | ||||| Sbjct 69059 GGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAAT--GGCATACCAGAGCTTCTGAGCCTTA 69002 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGTAGAGCTCGTTGAAT 213740 | | ||| || || | | ||| | |||| ||||| || | | |||| Sbjct 69001 ATG----GTTAGACGGCCACGACCCT--CCTTTTCATACTTCTCGTACAGAGCCTCGAAT 68948 Query 213741 TCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTC 213799 || | ||| || | | | |||| || || || ||| ||||| || ||||||| Sbjct 68947 TCATCGCCGTAGCAGTCAG-CCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTC 68889 Query 213800 CCCGTCATCTCTGACT-CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 || | | ||| | | | || ||||||||| || |||| |||||| || |||||| | Sbjct 68888 ACCATTCT-TCTCAATACGCTTCATGAACAGATCAGGGATCCACAGAGCAAGGAACAGAT 68830 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | | || | ||| ||| || || ||||| ||||| || || ||||| | || Sbjct 68829 CACGGGCGCGAACCTCCTCCTTGCCGTGATTCTTGCGGAGATCGAGGAACTCAAATACGT 68770 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGT 213975 | || ||||| ||||| | || || ||||| || || || | |||| || ||||||| Sbjct 68769 CTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGT 68710 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035 | || | ||| ||||||||| || || | ||| || | ||||| || | Sbjct 68709 CAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTAC 68650 Query 214036 CGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGC 214095 ||||||| || || || || ||||||| || | | | | | ||| || || | Sbjct 68649 CGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCCAATAC 68590 Query 214096 CACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGC 214155 |||| || |||||| ||||| || || | ||| || || ||| || | |||| Sbjct 68589 CACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGC 68530 Query 214156 TGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGA 214213 ||||||| | | || | || |||||| ||||||| | |||||| ||| |||| Sbjct 68529 TGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCT-GCGCCTGG-GGAGTACCAGC 68472 Query 214214 GTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 ||||| || |||||| ||||| | | |||||| |||| | ||| |||| ||||| Sbjct 68471 ATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTGCTAGACATGAGGTTGTAAGTCTC 68412 Query 214274 CAGGAC 214279 ||| || Sbjct 68411 CAGAAC 68406 >seq46 Length=146035 Score = 143 bits (158), Expect = 5e-29 Identities = 474/728 (65%), Gaps = 13/728 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | ||| |||||||| Sbjct 141508 CTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTC 141567 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 141568 CATGAAGTCGAAGGGGTTGGAAGCCTTGTAGACCT-TCTCGTTACCAAGGGCAACGAGAA 141626 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || ||| |||||||||| | ||||||| |||||| || | |||| Sbjct 141627 GACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGG 141686 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||||| |||| || || ||||||||||| || || || || | || Sbjct 141687 -CACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATT 141745 Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || | | || || || | |||||| ||||| | |||| |||| Sbjct 141746 TCCTGGATCAGTTGCTTGCTAGGGCGGTTGTTG---AGGTGAGAGTACAAGAG---GCAG 141799 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || ||||| || || ||| | ||||| || || ||| Sbjct 141800 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCA 141859 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || | |||||| || | || || | || ||||||||||| Sbjct 141860 GGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATA 141919 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || ||||| || || ||| | || | || | | | |||||| | ||| Sbjct 141920 CCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCGGCAATC 141979 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || || ||||| || ||||| ||||| || || || || ||||| ||| Sbjct 141980 CACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAG 142039 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | ||| || | | ||| | || ||| | |||| | ||| ||||| Sbjct 142040 AGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCA 142099 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | ||||| ||||| Sbjct 142100 GAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGA 142159 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| || | ||| | || ||||| || || || ||||| |||||||||||| Sbjct 142160 ACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAG 142219 Query 48554 AAGGCAAG 48561 || || || Sbjct 142220 AAAGCGAG 142227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525301160960