Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq116 273 4e-68
seq46 143 5e-29
>seq116
Length=85249
Score = 273 bits (302), Expect = 4e-68
Identities = 901/1386 (65%), Gaps = 35/1386 (3%)
Strand=Plus/Minus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
||||| || | |||||| ||||| | || || | | |||||| | ||| || |||||
Sbjct 69769 GGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTAT 69710
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
|| |||| || ||||||||| ||||||||||| | ||| ||||| || |||||||||||
Sbjct 69709 GGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCA 69650
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
| || ||| ||| | || |||| || ||| | | ||| | |||||||
Sbjct 69649 AGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCC 69590
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
|| ||||| | | |||| |||||| |||||||| | ||| || | |
Sbjct 69589 CAA---------AGGTCACTGGGGGTGACGTCCCACATATCAAACTGGAGGATACCCTGG 69539
Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTG-GCCAGCTCGCAGGA 213205
||||| ||||| ||| | ||||| | || | | ||| | | |||||| ||
Sbjct 69538 GAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCT-CAATTTGAGAGATCTCGCAAGA 69480
Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265
||||| ||| || |||| ||| ||||| ||||| |||| |||| | | || ||
Sbjct 69479 CGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATTGGCGAGCTTC 69420
Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
| ||| |||||||| || | |||| ||||||| || ||||| || || |
Sbjct 69419 AGCTGACTCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCAC 69360
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385
|| ||||| | ||| | || ||| ||| | ||| | |||||| ||||
Sbjct 69359 ACCAATGGGACGGTGGCGCATGTTGCTGTTGTAAGCCTCGGGAACGGGGTAGTGGTTGAC 69300
Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTG 213445
||| ||||| ||| | |||||| | || |||||||| | | ||| | || |
Sbjct 69299 GTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAA 69240
Query 213446 ATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCA 213505
| | | || | || | |||||| | || || || | | ||| ||||||||
Sbjct 69239 GTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCA 69180
Query 213506 AACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCG 213565
||| || ||||| | || | ||||| || ||||| |||||||||||| || ||
Sbjct 69179 AACAGCAACCTCATCAGGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCG 69120
Query 213566 GATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTA 213625
|||||| ||||| |||| ||||| ||| |||| | |||||||| | |||| |
Sbjct 69119 GATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAA 69060
Query 213626 GGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTG 213683
|||| |||||||| |||| | |||| || ||| |||||| | | |||||
Sbjct 69059 GGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAAT--GGCATACCAGAGCTTCTGAGCCTTA 69002
Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGTAGAGCTCGTTGAAT 213740
| | ||| || || | | ||| | |||| ||||| || | | ||||
Sbjct 69001 ATG----GTTAGACGGCCACGACCCT--CCTTTTCATACTTCTCGTACAGAGCCTCGAAT 68948
Query 213741 TCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTC 213799
|| | ||| || | | | |||| || || || ||| ||||| || |||||||
Sbjct 68947 TCATCGCCGTAGCAGTCAG-CCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTC 68889
Query 213800 CCCGTCATCTCTGACT-CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858
|| | | ||| | | | || ||||||||| || |||| |||||| || |||||| |
Sbjct 68888 ACCATTCT-TCTCAATACGCTTCATGAACAGATCAGGGATCCACAGAGCAAGGAACAGAT 68830
Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918
| | || | ||| ||| || || ||||| ||||| || || ||||| | ||
Sbjct 68829 CACGGGCGCGAACCTCCTCCTTGCCGTGATTCTTGCGGAGATCGAGGAACTCAAATACGT 68770
Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGT 213975
| || ||||| ||||| | || || ||||| || || || | |||| || |||||||
Sbjct 68769 CTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGT 68710
Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035
| || | ||| ||||||||| || || | ||| || | ||||| || |
Sbjct 68709 CAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTAC 68650
Query 214036 CGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGC 214095
||||||| || || || || ||||||| || | | | | | ||| || || |
Sbjct 68649 CGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCCAATAC 68590
Query 214096 CACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGC 214155
|||| || |||||| ||||| || || | ||| || || ||| || | ||||
Sbjct 68589 CACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGC 68530
Query 214156 TGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGA 214213
||||||| | | || | || |||||| ||||||| | |||||| ||| ||||
Sbjct 68529 TGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCT-GCGCCTGG-GGAGTACCAGC 68472
Query 214214 GTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273
||||| || |||||| ||||| | | |||||| |||| | ||| |||| |||||
Sbjct 68471 ATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTGCTAGACATGAGGTTGTAAGTCTC 68412
Query 214274 CAGGAC 214279
||| ||
Sbjct 68411 CAGAAC 68406
>seq46
Length=146035
Score = 143 bits (158), Expect = 5e-29
Identities = 474/728 (65%), Gaps = 13/728 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || | | ||| ||||||||
Sbjct 141508 CTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTC 141567
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 141568 CATGAAGTCGAAGGGGTTGGAAGCCTTGTAGACCT-TCTCGTTACCAAGGGCAACGAGAA 141626
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || || ||| |||||||||| | ||||||| |||||| || | ||||
Sbjct 141627 GACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGGG 141686
Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||||| |||| || || ||||||||||| || || || || | ||
Sbjct 141687 -CACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCGGTGATGATT 141745
Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
| || | | || || || | |||||| ||||| | |||| ||||
Sbjct 141746 TCCTGGATCAGTTGCTTGCTAGGGCGGTTGTTG---AGGTGAGAGTACAAGAG---GCAG 141799
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|||||||| |||| | || ||||| || || ||| | ||||| || || |||
Sbjct 141800 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCA 141859
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||||| || | || | |||||| || | || || | || |||||||||||
Sbjct 141860 GGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGATA 141919
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || ||||| || || ||| | || | || | | | |||||| | |||
Sbjct 141920 CCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTGGATTCCTTGTCGGCAATC 141979
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| || ||||| || ||||| ||||| || || || || ||||| |||
Sbjct 141980 CACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAG 142039
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | ||| || | | ||| | || ||| | |||| | ||| |||||
Sbjct 142040 AGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCA 142099
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | ||||| |||||
Sbjct 142100 GAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAACCTGA 142159
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | ||| || | ||| | || ||||| || || || ||||| ||||||||||||
Sbjct 142160 ACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGCAAAG 142219
Query 48554 AAGGCAAG 48561
|| || ||
Sbjct 142220 AAAGCGAG 142227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931525301160960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |