Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq116 174 3e-38 seq46 161 2e-34 >seq116 Length=85249 Score = 174 bits (192), Expect = 3e-38 Identities = 707/1103 (64%), Gaps = 41/1103 (4%) Strand=Plus/Minus Query 221406 CGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT 221465 |||||||| | ||| || |||||||| ||||||||||||||| |||| | | Sbjct 69486 CGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATTGGC 69427 Query 221466 TGGCCTCGGGAGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGT 221524 || || | || |||||||| ||||| | || | ||| | || || || ||||| Sbjct 69426 GAGCTTCAGCTGACTCAAAGGGCATGCGCAG-AGCTAGGAAGGCATCAGCAAGACCCTGA 69368 Query 221525 ACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAA 221584 || || | ||| ||||| | ||| | | ||||| | || || || ||||| || Sbjct 69367 ACACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTGTAAGCCTCGGGAACGGGGTAG 69308 Query 221585 AAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGC 221644 ||||||||| || | ||| | ||| || | || || |||||| |||| Sbjct 69307 TGGTTGACGTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGCAGC 69248 Query 221645 TTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGG 221704 |||||| || ||| || || | | || ||||| ||| || Sbjct 69247 TTCTGG------------AAGTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAGA 69200 Query 221705 GCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764 || | | ||| ||||| || || || ||||| || ||||| || ||||| Sbjct 69199 GCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATACTCGATAATCTCA 69140 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || || |||||| || |||||| ||||| | || || || ||| || ||| | Sbjct 69139 GTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCAA 69080 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 ||||||||| | ||| ||||| || ||||| || ||| ||||||| | | Sbjct 69079 TGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAATGGCATAC 69020 Query 221885 CAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGC----ACCCTCGGTCTTTTCATAC- 221938 ||||| | |||| || | | || | ||| || |||||| |||||||||| Sbjct 69019 CAGAGCT-TCTGAGCCTTAATGGT----TAGACGGCCACGACCCTC---CTTTTCATACT 68968 Query 221939 -CCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 | ||| ||||| | | || | || ||||| || ||||||| || ||| | Sbjct 68967 TCTCGTACAGAGCCT--CGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTT 68910 Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| ||||||||| |||||| || | | | | || |||||| || || ||||| Sbjct 68909 GGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGATCAGGGAT 68850 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 |||||| || | || ||||| | || || ||||||| ||||| || || | || Sbjct 68849 CCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATTCTTGCGGAG 68790 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 ||| | |||||||| | ||| || ||||| ||||| ||||| | || | ||| ||||| Sbjct 68789 ATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACCGGG 68730 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236 ||||||||||||||||| | || ||| ||| | |||||||| || || | | Sbjct 68729 ACGCTTGTTGCCACCCTGGT-CAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGG 68671 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || | ||||| || ||||||||| || ||||| | ||| || | || Sbjct 68670 GAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCAC---GGA 68614 Query 222297 TACTGGCAGAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG 222352 ||| || || | ||| |||||||| || || || ||||| || || |||| Sbjct 68613 TAC-GGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCTTC 68555 Query 222353 AGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGAC 222412 | || || ||| ||||| || ||| ||||| | || | ||| || || || || Sbjct 68554 AAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAG 68495 Query 222413 ATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCC 222472 | ||| | | || | || || || ||||| ||||| || || || ||| | Sbjct 68494 AGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTG 68435 Query 222473 CTAGACATCAGATCGTACGTCTC 222495 |||||||| || | ||| ||||| Sbjct 68434 CTAGACATGAGGTTGTAAGTCTC 68412 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | || || | | |||||| | ||| || ||| | || Sbjct 69767 GTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGG 69708 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 ||||| || ||||||||||||||| ||||| | || |||||||| |||||||| || | Sbjct 69707 TTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAG 69648 Query 221236 CAGCAGACTGTTGCG 221250 || ||| |||||| Sbjct 69647 GAGAAGAGAGTTGCG 69633 >seq46 Length=146035 Score = 161 bits (178), Expect = 2e-34 Identities = 557/862 (65%), Gaps = 28/862 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | || |||||| || || ||||||||| Sbjct 142356 GAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCGTTCTGGACTGCTGAGGAGATTGAT 142297 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATC--CAAAGACGAGCAGCATTTTCTC 25590 ||| | ||||| | ||| |||| || | || ||| || |||||| ||| || Sbjct 142296 CTGTCTAAGGATCTTCACGACTGGAACAACCGCATGAACAAGGATGAGCAGTTCTTTATC 142237 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || | | || |||||||| || |||||||| || ||||||||||| || ||| Sbjct 142236 TCTCACATTCTCGCTTTCTTTGCTGCTTCTGATGGCATTGTGAACGAGAACCTTGTTGAG 142177 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | || || || || ||| ||||| || ||||||||||||||||| Sbjct 142176 CGCTTTTCCGCTGAGGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATG 142117 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGT 25769 || || || | ||||||||| || || ||| | ||| || ||||| | || Sbjct 142116 ATGGAGAACATTCACTCTGAGACCTACTCCCTGCTGATTGAT-ACTTACATCAAGGAGCC 142058 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 |||| || | | || ||| ||||| || ||| ||| |||| | ||||| Sbjct 142057 CGCCCAGCGCACTTATCTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGC 141998 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||| |||||||||| | | || | || |||| |||| || || || Sbjct 141997 CGATTGGGCCCTGAAGTGGATTGCCGACAAGGAATCCACCTTTGCTCAGCGCCTCGTTGC 141938 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG---GCT 25946 ||||| || || ||||| ||||| ||| |||| | ||||| |||||||||| || Sbjct 141937 TTTTGCGGCCGTCGAGGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCG 141878 Query 25947 CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| | || | |||||| || ||| |||||||| ||||| || | |||| Sbjct 141877 CAAGC----GTGGTCTCATGCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGACG 141822 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACC 26063 ||||||| |||| || ||||||||||| | ||| | ||| ||| |||| || Sbjct 141821 AGGGTCTTCACACCGACTTTGCCTGCCTCTTGTACTC---TCAC---CTCAACAACCGCC 141768 Query 26064 TTCTCAAGAGACCG-TCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122 | |||| || | || | ||||||| || ||||| | || ||||||||||| | Sbjct 141767 CTAGCAAGCAACTGATCCAGGAAATCATCACCGATGCTGTCGCTATTGAGAAGGAGTTCC 141708 Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATAC 26181 | || |||||| | || ||||||| ||| Sbjct 141707 TTACCGAGGCCCTGCCCTGTGCCCTTCTCGGTATGAAC-GCTGACCTCATGAAGACGTAC 141649 Query 26182 ATTGAGTATGTGGCCGACCATCTGCT--GTGCCAGCTGGGACTCGCCAGACTCTACAGTA 26239 || |||| || ||||||| ||| || |||| || || || | |||||| Sbjct 141648 ATCGAGTTCGTTGCCGACCGTCTTCTCGTTGCC--CTTGGTAACGAGAAGGTCTACAAGG 141591 Query 26240 CGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTG 26299 | | ||||| |||||||| ||||| ||||| ||| | | || |||||||||||||| | Sbjct 141590 CTTCCAACCCCTTCGACTTCATGGAGAACATTTCGCTTGGTGGCAAGACCAACTTCTTCG 141531 Query 26300 AAAAGAGGGTCGGCGACTATCA 26321 | ||| | || || || || || Sbjct 141530 AGAAGCGCGTTGGTGATTACCA 141509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837322799360