Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq13 109 4e-18 seq157 87.8 1e-11 >seq13 Length=240985 Score = 109 bits (120), Expect = 4e-18 Identities = 118/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| |||||||||||||| || || || || || || || ||||| || ||||| Sbjct 38574 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 38515 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| |||||||| |||||| ||||| ||||||| | | || |||||| |||| Sbjct 38514 GTCCTGAATCTTGGACTTGACATTGTCAATGGTATCAGAAGACTCAA-CTTCAAGAGTAA 38456 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || ||||| ||||| |||||||| || Sbjct 38455 TGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTG 38422 >seq157 Length=65766 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| || || | | ||| || || ||||| |||||||| || ||||| || Sbjct 45129 TTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGC 45070 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || ||||| || ||||| || || ||||| |||||| || || || || Sbjct 45069 TGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTGTCC 45010 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | || |||||||| || ||||| || || |||||||||||||| || Sbjct 45009 GAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTAACGAAAATCTG 44954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268151575715312