Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq13 109 4e-18
seq157 87.8 1e-11
>seq13
Length=240985
Score = 109 bits (120), Expect = 4e-18
Identities = 118/154 (77%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| ||||| |||||||||||||| || || || || || || || ||||| || |||||
Sbjct 38574 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 38515
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||| |||||||| |||||| ||||| ||||||| | | || |||||| ||||
Sbjct 38514 GTCCTGAATCTTGGACTTGACATTGTCAATGGTATCAGAAGACTCAA-CTTCAAGAGTAA 38456
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || ||||| ||||| |||||||| ||
Sbjct 38455 TGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTG 38422
>seq157
Length=65766
Score = 87.8 bits (96), Expect = 1e-11
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| || |||| || || | | ||| || || ||||| |||||||| || ||||| ||
Sbjct 45129 TTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGC 45070
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
||||| || ||||| || ||||| || || ||||| |||||| || || || ||
Sbjct 45069 TGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTGTCC 45010
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | || |||||||| || ||||| || || |||||||||||||| ||
Sbjct 45009 GAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTAACGAAAATCTG 44954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268151575715312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |