Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq13 87.8 3e-12
>seq13
Length=240985
Score = 87.8 bits (96), Expect = 3e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| || |||||||| | || | | ||| || | || ||||| ||||| || | |
Sbjct 38601 AATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCG 38542
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| || || || || || || || || || || || |||| || | ||| ||| ||
Sbjct 38541 CTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGT 38482
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
||| |||||||||||||| ||||| || || || || || || || || || || || ||
Sbjct 38481 ATCAGAAGACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTG 38422
Query 193358 CAT 193360
|||
Sbjct 38421 CAT 38419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899647157782080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |