Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 3e-12 >seq13 Length=240985 Score = 87.8 bits (96), Expect = 3e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || |||||||| | || | | ||| || | || ||||| ||||| || | | Sbjct 38601 AATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCG 38542 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| || || || || || || || || || || || |||| || | ||| ||| || Sbjct 38541 CTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGT 38482 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| |||||||||||||| ||||| || || || || || || || || || || || || Sbjct 38481 ATCAGAAGACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTG 38422 Query 193358 CAT 193360 ||| Sbjct 38421 CAT 38419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899647157782080