Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq116 181 3e-40
seq46 120 9e-22
seq42 100 8e-16
seq126 89.7 2e-12
seq80 86.0 2e-11
>seq116
Length=85249
Score = 181 bits (200), Expect = 3e-40
Identities = 594/911 (65%), Gaps = 19/911 (2%)
Strand=Plus/Minus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
|| || | ||||||| ||||||||| || || |||||| || | ||||||||||||
Sbjct 69154 TACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTG 69095
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
|| | ||| ||| |||||||| | ||| | ||| |||| ||||| | || ||
Sbjct 69094 CTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCC 69035
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG-CCTTCCGA 155809
|||||||| |||||| | | || ||||| | | | | | || |||
Sbjct 69034 TCCAGAATGGCATACCAGAGCTTCTGAGCCTTAATG-GTTAGACGGCCACGACCCTCCTT 68976
Query 155810 CTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA 155869
||||| ||| ||||| | | | || || ||||| || ||| ||| ||||||||
Sbjct 68975 TTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCA 68916
Query 155870 CTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATAC 155926
|| | |||||| | ||| | ||| | || || | || ||||| ||| || |
Sbjct 68915 CTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAAT---ACGCTTCATGAACAG 68859
Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986
|||| ||| | |||| ||| || || | || |||||| | |||||||||
Sbjct 68858 ATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATT 68799
Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATA--TCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||| || || || | ||| || |||| || | ||| ||||| ||||| ||||||
Sbjct 68798 CTTGCGGAGATCGAGGAACTCA--AATACGTCTGCATGCCAAGGCTCAAGATAAATAGCA 68741
Query 156045 AAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
||| ||| | | | ||||||||||| || ||||| || ||||| || |||||||||
Sbjct 68740 AAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACA 68681
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGA 156160
| ||||| |||| ||||| || ||||| || ||||| || ||| || | || || |
Sbjct 68680 CGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCG-ATGTAAGAGCCGGT 68622
Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGC 156219
| || | | |||| | || ||||||||||| | |||| || ||||| ||| |
Sbjct 68621 AGCACGGATACGGTGAACGTTGAGGCCAATACCACCCG-CCATCTTGGAAATCATAGCAC 68563
Query 156220 ATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGC 156279
| ||| | |||| | ||||| ||||| ||||| | ||| | || |||
Sbjct 68562 AAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGC 68503
Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339
||||| | || | | || || ||||| ||||| || || || | ||||||| | |
Sbjct 68502 ACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGA 68443
Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAA 156399
| |||| ||||||| | ||| |||||| || ||| | ||| || ||
Sbjct 68442 AGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCACCCCAAA 68383
Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTC 156459
| | || || | ||| ||| ||||| || ||||| |||||| |||||||
Sbjct 68382 CGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAAGCT 68323
Query 156460 GCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGT 156519
|| || || | || ||||| || || || || || || | | | ||||||||||
Sbjct 68322 TAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATCACGGT 68263
Query 156520 TGTAATCAATC 156530
|| |||||
Sbjct 68262 CATACACAATC 68252
>seq46
Length=146035
Score = 120 bits (132), Expect = 9e-22
Identities = 295/445 (66%), Gaps = 2/445 (0%)
Strand=Plus/Minus
Query 133214 TTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTA 133273
||||| ||| ||| | || || |||||||| |||||| ||||| || || |
Sbjct 142242 TTTATCTCTCACATTCTCGCTTTCTTTGCTGCTTCTGATGGCATTGTGAACGAGAACCTT 142183
Query 133274 GGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAG 133333
| || ||| | || ||||| | |||| || || ||| || || | |||
Sbjct 142182 GTTGAGCGCTTTTCCGCTGAGGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGGTTTCCAG 142123
Query 133334 ATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAA 133393
|| |||||| || || || ||| || || || || |||||||||||||||||
Sbjct 142122 ATCATGATGGAGAACATTCACTCTGAGACCTACTCCCTGCTGATTGATACTTACATCAAG 142063
Query 133394 GATACCGTCCAGAAGCACAAA-CTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAA 133452
|| ||| |||| |||| | || || ||||||||| | |||| || |||
Sbjct 142062 GAGCCCGCCCAGC-GCACTTATCTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCG 142004
Query 133453 GAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCT 133512
|| | || ||||| | || ||||| |||||| | | |||||| || ||
Sbjct 142003 CAAGGCCGATTGGGCCCTGAAGTGGATTGCCGACAAGGAATCCACCTTTGCTCAGCGCCT 141944
Query 133513 CGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTG 133572
|||||||||||| | || ||||| || || ||| ||||| || ||| || || ||
Sbjct 141943 CGTTGCTTTTGCGGCCGTCGAGGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTG 141884
Query 133573 GCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGA 133632
| | ||||||||| | | ||||| ||| |||||| || || || ||||| | ||
Sbjct 141883 GTTGCGCAAGCGTGGTCTCATGCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGA 141824
Query 133633 CGAGGCACTTCACACCGAATTTGCC 133657
||||| ||||||||||| ||||||
Sbjct 141823 CGAGGGTCTTCACACCGACTTTGCC 141799
>seq42
Length=153607
Score = 100 bits (110), Expect = 8e-16
Identities = 382/593 (64%), Gaps = 24/593 (4%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| ||||| || | | ||| | || || ||| | ||||| ||| | ||| | | ||
Sbjct 99346 ATCAGACCGCAAATCTCACAGATGTGTACTCTGAACGCATCCGATACCTCAAACAAACGC 99405
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| | ||||||||| | ||||||||||||||| ||||||||||| |||
Sbjct 99406 TCCTTCAAGAACGCTGCTGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAAAA 99465
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|| ||||||||||| | || | |||||| ||||||| | || | | || ||
Sbjct 99466 CGCAGACCACCATCTCTGGCACGACCCTCCACAGGCTGTCTCGTCATGATCTGCACCGGG 99525
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| || || || ||| || | ||||| || |||||||||||| |||
Sbjct 99526 CCACGGGCACGCGCGTGAATCTTGTCGTCGACCATGTGACGCAGACGCTGGTAGTATGTA 99585
Query 251647 GGACCGATGAAGA----TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAAC 251702
|| || | ||| | ||||| || || | |||||| | ||| |||| |
Sbjct 99586 GGTCCAAAGAACACCTGTGCTC----TCAGTTTCCGTCCAGTGTGTCCGTGGTACAGCGC 99641
Query 251703 TTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCAC-CAATC- 251760
||| ||| ||| | || || | ||| || | | |||| ||| ||||
Sbjct 99642 CTCGAAACCACGAGACTGGTATCC---GTGCTG--GCGCAGCAGCATGGACACGGAATCG 99696
Query 251761 ---TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTG 251817
||| | | ||| |||| |||| || | ||||||| | | | || ||
Sbjct 99697 ACAGTGACGTCAGTGAAAGGGGTGGCGTCACCCTCAAGACCCTTAAGGGTAGCAACCTTA 99756
Query 251818 CCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTG 251877
| | ||| ||| ||| ||||| || ||||||||| |||||| || ||||| ||
Sbjct 99757 CTCAGAAGACACTCAATCAAATGGGCAATGGTCATACGAGAGGGAATGGCGTGGGGGTTA 99816
Query 251878 ATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCC--TCAATA- 251934
|||||||| || || | | || || |||||||||||||| |||| || ||
Sbjct 99817 ATGATGATATCAGGCGTAATACCCTCGCGGGTGAAGGGCATATC---TTCCTGTCTGTAG 99873
Query 251935 ATGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| ||||| || || || |||||||||||||| ||||| ||||||||
Sbjct 99874 GTAACACCAATTGTACCTTTCTGTCCGTGACGAGAGGCAAACTTGTCACCAAT 99926
Score = 96.9 bits (106), Expect = 1e-14
Identities = 55/56 (98%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATC 233328
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 99424 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAAAACGCAGACCACCATC 99479
>seq126
Length=79336
Score = 89.7 bits (98), Expect = 2e-12
Identities = 129/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541
|||||||||| | ||||| ||||||||||||||||||||| | ||| | |||||| |||
Sbjct 62094 GATGCACCGTACGCAATCAAACAATCACGCTCCATTTCACCCAGACGCAAACCACCTTCG 62035
Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601
|| | | ||| || | |||||| || || || | |||||| |||| ||
Sbjct 62034 CGGGAACGACCTTCAGTAGGCTGGCGGGTAAGCGAGGCACGAGGACCCGTGGAACGAGAG 61975
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATG--AAGA 251659
|| ||| || | ||||| ||||| | ||||||||| | ||||||| || ||||
Sbjct 61974 TGCATCTTGTCTTGCACCATGTGCTTCAAGCGCTGGTAGTAAATGGGACCGTTGTAAAGA 61915
Query 251660 T 251660
|
Sbjct 61914 T 61914
>seq80
Length=109397
Score = 86.0 bits (94), Expect = 2e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074
||||||| |||| || ||||||||||| | ||| |||||||| |||||||| | ||| |
Sbjct 88496 GGCGAGACCACCGAGAGAGTCACGGTCCAAGAAGTTAGTAGGCTCGTCAAGAACAAGCAA 88555
Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134
||| || | ||||||| || | || | || ||||| |||||||| || || || ||
Sbjct 88556 GTGGGGGTTGTTCCACATGGCACCGGCAATGACGACCTTGACCTTCTGGCCACCGGACAG 88615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471805455665028
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |