Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq116 113 4e-20 seq157 105 6e-18 seq13 98.7 9e-16 >seq116 Length=85249 Score = 113 bits (124), Expect = 4e-20 Identities = 1042/1674 (62%), Gaps = 56/1674 (3%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417 || |||||||| |||||||| ||| | |||| || || | | || |||||| Sbjct 69910 ATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATACTGGGGATGTTTTGA 69851 Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTG 138477 ||| |||||| | |||||||| || || |||||| ||| |||| | | | Sbjct 69850 ATGGAACCGTTGTCGGCAATGATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCG 69791 Query 138478 ATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGA 138537 | || ||| | || | ||| | ||||| || ||||| |||| || || || Sbjct 69790 ACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGC 69731 Query 138538 ACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTG 138597 ||| |||||| |||| | || || || | |||||||| ||||||||||| | || Sbjct 69730 TGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTA 69671 Query 138598 GTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGT 138657 | |||||||||||| || | | |||||| || || | ||||| |||||| | Sbjct 69670 CTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGC 69611 Query 138658 TCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGT 138717 ||||| || || | ||||||||| | || || || | || ||||||||| |||| Sbjct 69610 TCCTTAAGAGAAGTCCAGTCCCAAAGGTCACTGGGGGTGACGTCCCACATATCAAACTGG 69551 Query 138718 AACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTA--TACACCAAACTCTTGCG 138775 | || ||| ||||| ||| ||||| | ||| ||| | || ||| | Sbjct 69550 AGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCTCAA--TTTGAG 69493 Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835 | |||| |||||| || || | | |||||| || | ||| |||| || Sbjct 69492 AGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCT---CAAAGATCTGAGTGT 69436 Query 138836 GCAAT---CGGGCCTCGGCGCTCTCGTACGGCATGCG--GAGCATCGTGAACGCGTCGGC 138890 |||| || || || || ||| | |||||||| |||| | | ||| || || || Sbjct 69435 TCAATTGGCGAGCTTCAGCTGACTCAAAGGGCATGCGCAGAGC-TAG-GAAGGCATCAGC 69378 Query 138891 CAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTG-CGGCTT 138949 || || || || ||||| || | || || ||||||| || ||| ||| || | Sbjct 69377 AAGACCCTGAACACCCACACCAATGGGACGGTGGCGCA----TGTTGCTGTTGTAAGCCT 69322 Query 138950 CG---ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAG 139006 || | || || | ||| || || ||||| ||| || || || || || ||||| | Sbjct 69321 CGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGG 69262 Query 139007 TCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACA 139065 | | | | | | | | || ||||||| || || | | ||| ||| Sbjct 69261 T-GACCTCGTGCAGCTTCTGGAAGTCGTATG---------AGTTGTTGGTGTAGTCAACA 69212 Query 139066 AATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTAT 139125 || | || | | ||||| | |||||| || || || || || || | | || Sbjct 69211 AACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATAC 69152 Query 139126 TCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTT 139185 |||| ||| || | |||| || | ||| ||||| | ||| | || ||||| Sbjct 69151 TCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTC 69092 Query 139186 TTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCT 139245 || ||||| ||| || ||||| | ||| | || | || || || ||| | ||| Sbjct 69091 TTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCC 69032 Query 139246 ATAATGAATTTGAACAAGTCCCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGC 139302 | |||| | | | | | ||| | | || |||| | | | | || Sbjct 69031 AGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTTAGACG---GCCACGACCCTCCTTT 68975 Query 139303 TCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACAC 139362 || ||||| ||||| || | |||||| || |||||| ||||| || | | ||| Sbjct 68974 TCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCAC 68915 Query 139363 TTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCC 139422 | || || ||||| || | ||| | || ||| || | ||| ||||||||||||| Sbjct 68914 TCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGATCA 68855 Query 139423 GGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGT 139482 || ||||||| ||| | | || ||| || || || ||| || || | | | Sbjct 68854 GGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCC-TTGCCGTGATTC-T 68797 Query 139483 TTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTG 139540 | | | | ||||| ||||| ||||| || ||||| || || ||||| || || | | Sbjct 68796 TGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAG 68737 Query 139541 CGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCA 139597 | || || |||||||| || || || | || ||| || ||||| || || | Sbjct 68736 CACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGA 68677 Query 139598 ACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTC 139657 ||| || | | |||| | | || |||||||| | | |||| | | | ||| | Sbjct 68676 GCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCAC 68617 Query 139658 GGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGC 139717 ||| || || |||| ||| || || || | | ||||| || | | | ||| Sbjct 68616 GGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCT 68557 Query 139718 GTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACG 139777 || || || || ||||| |||||||| |||| ||| ||||| ||||| || | Sbjct 68556 TCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAG 68497 Query 139778 AAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTT 139837 | || |||| | || || || |||||||| || || || ||||| | | Sbjct 68496 AGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAACT 68437 Query 139838 GTTTCGACATCAATTCGTACGTTTC--GATGGCGCTC-ACAATATCCCTTCCGTGGATAC 139894 | ||||| | | ||| || || || ||||| ||| | || || | | Sbjct 68436 TGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTC---ACCCCAAACGC 68380 Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954 | |||| || ||||| | ||| || ||| || || | | | ||| || | || Sbjct 68379 CAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAAGCTTAA 68320 Query 139955 tCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||| | || ||| ||||||||| ||||||||||| |||||||||||| Sbjct 68319 GGAGATAGGAACG--CTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATC 68268 >seq157 Length=65766 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || |||| || || || ||||| || ||||| ||||| || || || | Sbjct 44950 GATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTC 45009 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || || || || || || ||||| Sbjct 45010 GGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCA 45069 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||||||||| || || |||||||||||| | | | | || || || || Sbjct 45070 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTACAA 45129 Query 24883 CATTCAAAAGG 24893 |||||| |||| Sbjct 45130 CATTCAGAAGG 45140 >seq13 Length=240985 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || ||||| | || || || | || Sbjct 37963 ATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATTACCTTGGAGGTTGAGTCTTCC 38022 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 38023 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 38082 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||| |||||| | | | | || ||||| ||| Sbjct 38083 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCCGATTACAAC 38142 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || |||||||| || || ||| Sbjct 38143 ATCCAGAAGGAATCCACTCTCCAC 38166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893978324320