Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq46 129 9e-24
seq116 109 9e-18
seq5 96.9 5e-14
seq76 95.1 2e-13
seq42 89.7 8e-12
seq143 87.8 3e-11
>seq46
Length=146035
Score = 129 bits (142), Expect = 9e-24
Identities = 232/335 (69%), Gaps = 17/335 (5%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| |||| || ||| ||| ||||| |||||||| || |||||
Sbjct 141817 ACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCATGAGACCACGCTT 141876
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
| ||| ||||||| || || || | ||||| ||||| ||||||||||| ||
Sbjct 141877 GCGCAACCAGAAGATGGAGGCAAAGGCACCG---GAGAAGAAGATACCCTCGACGGCCGC 141933
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCAT 794513
||| | ||||| |||| ||||| ||| || |||| | ||||||||||
Sbjct 141934 AAAAGCAACGAGGCGCTGAGCAAAGGTGGAT------TCCTTGTCGGCAATCCACTTCAG 141987
Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GT 794572
||||| || ||||| | | |||| | ||||| |||||| |||||| | ||
Sbjct 141988 GGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGATAAGT 142047
Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632
| || | | || ||||||| ||| || || || || || ||||||||||| ||||| |
Sbjct 142048 GCG-CTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGTGAA 142106
Query 794633 TGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
|||| || || ||||||||| || || ||||||
Sbjct 142107 TGTTCTCCATCATGATCTGGAAACCGTAGAAGCAG 142141
Score = 127 bits (140), Expect = 3e-23
Identities = 183/257 (71%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| |||||||| || || || |||||| |||||| |||||||||||||| | ||
Sbjct 141496 GACACCCGCCTTCTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAG 141555
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
||| || |||||| | ||| ||||||| | | |||| ||||||| || ||
Sbjct 141556 CGAAATGTTCTCCATGAAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACCAAG 141615
Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071
| | || || |||||||| ||||| || |||||| ||||||| | ||||||||
Sbjct 141616 GGCAACGAGAAGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCAT 141675
Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131
|||| || || |||||| | |||| | | ||||| ||||| || |||| || ||
Sbjct 141676 ACCGAGAAGGGCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATC 141735
Query 794132 GATGATGATCTGCCTGG 794148
| ||||||| | |||||
Sbjct 141736 GGTGATGAT-TTCCTGG 141751
Score = 98.7 bits (108), Expect = 2e-14
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 796297 AGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356
|| || | |||||| || ||||| || || ||||||||||| |||||||||| ||| |||
Sbjct 142295 AGATCAATCTCCTCAGCAGTCCAGAACGAAGCCTCGGCCTTCTTGTACATCTGCCAAATC 142354
Query 796357 CGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
||||| ||||||||| || || ||||| || |||||||| | ||||| |||||
Sbjct 142355 TCATGGTACTTGATGGGGAAAAGCACGAAGCGGTTAGGGTTCTCCTGCAGCAGAGGCTC 142413
>seq116
Length=85249
Score = 109 bits (120), Expect = 9e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| || || |||| ||| ||||| ||||||||||| || | ||||| ||
Sbjct 68714 CTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGA 68655
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | || || | ||| || | |||
Sbjct 68654 AGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCC 68595
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || ||| |||||| || | || || | |||| || || ||||| |||||
Sbjct 68594 AATACCACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGTATCATAGATACCCTC 68535
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | ||| |||||||| ||| |||| | | || ||
Sbjct 68534 AATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACC 68475
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|||||||| || |||||
Sbjct 68474 AGCATTGAACAGAGTGGG 68457
>seq5
Length=342721
Score = 96.9 bits (106), Expect = 5e-14
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| || ||||||||||| ||||| | || || ||| | || |||||||| || ||||||
Sbjct 269696 GCTGCGAACTACCTCGATATCAAAGCTCTTCTTGATGTTGGCTGCAAGACAGTCGCCAAC 269755
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754
| || ||||||||||| || ||||| ||||| ||||| || ||||||
Sbjct 269756 ATGATTAAGGGCAAGTCTCCTGAGGAAATCCGTAAGACTTTCAACATC 269803
>seq76
Length=114648
Score = 95.1 bits (104), Expect = 2e-13
Identities = 73/87 (84%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| || ||||||||| | ||||| || ||| | |
Sbjct 8393 GTACTTGGTGACGGCCTTGGTACCCTCAGAAACGGCGTGCTTAGCCAGCTCACCGGGGAG 8334
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557
||| || || |||| |||||| |||||
Sbjct 8333 GATGAGACGGACGGAGGTCTGAATCTC 8307
>seq42
Length=153607
Score = 89.7 bits (98), Expect = 8e-12
Identities = 157/224 (70%), Gaps = 10/224 (4%)
Strand=Plus/Plus
Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164
|| ||||| ||||||||||| || || || || || || | || |||||||||| |
Sbjct 54000 GAAGCCGTTCTCGAACTCAACGCCTCTGATGAACGTGGTATTGATGTCGTGCGTAACCGC 54059
Query 2019165 ATCAAGCATCACGCTTCG---AAAAGAA-TCGAC-CTGCCGCCCGGCCGCCACAAGGTGA 2019219
|||||| || ||| | ||||||| ||| ||||| | ||| | || || |||
Sbjct 54060 ATCAAG----AC-CTTTGCACAAAAGAAGGTGACGTTGCCGGCAGGCAGACATAAACTGA 54114
Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCA 2019279
||||| | |||||||| || | | || |||| || || |||||| | || |||||
Sbjct 54115 TCATCTTGGATGAGGCGGATAGTATGACATCGGGTGCGCAACAGGCCTTGAGAAGGACCA 54174
Query 2019280 TGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323
|||| | || | |||||||| |||||||| | || || |||
Sbjct 54175 TGGAGATTTATTCGAACACGACACGGTTTGCTTTTGCGTGTAAC 54218
>seq143
Length=70988
Score = 87.8 bits (96), Expect = 3e-11
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 2411434 AGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGG 2411493
|| || || |||| ||||| | |||||| ||| || | |||| | |||| |
Sbjct 983 AGACCAGGAACCATAGGGTTCATGAGGTGGCAGCGGTTCTTGAAGCCGATTTTGGGCATG 1042
Query 2411494 TGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACG 2411553
||| ||| || ||||||||||||||||||| | || ||||||| ||||||||||
Sbjct 1043 GCATCGTGCGACAAACCAAAGATCTTGCGCTGGTCAAGGCCACCAAACTCGGCGTCGACG 1102
Query 2411554 TCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTA 2411591
|| |||| || ||| || || ||||||||| |||||
Sbjct 1103 TCAAGGTACTCCTCATCCAGAAGCTGCATGAGAGGGTA 1140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916177894782716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |