Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq46 129 9e-24 seq116 109 9e-18 seq5 96.9 5e-14 seq76 95.1 2e-13 seq42 89.7 8e-12 seq143 87.8 3e-11 >seq46 Length=146035 Score = 129 bits (142), Expect = 9e-24 Identities = 232/335 (69%), Gaps = 17/335 (5%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| |||| || ||| ||| ||||| |||||||| || ||||| Sbjct 141817 ACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGCCAGGCATGAGACCACGCTT 141876 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 | ||| ||||||| || || || | ||||| ||||| ||||||||||| || Sbjct 141877 GCGCAACCAGAAGATGGAGGCAAAGGCACCG---GAGAAGAAGATACCCTCGACGGCCGC 141933 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCAT 794513 ||| | ||||| |||| ||||| ||| || |||| | |||||||||| Sbjct 141934 AAAAGCAACGAGGCGCTGAGCAAAGGTGGAT------TCCTTGTCGGCAATCCACTTCAG 141987 Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GT 794572 ||||| || ||||| | | |||| | ||||| |||||| |||||| | || Sbjct 141988 GGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGCGTTAAAGAGATAAGT 142047 Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632 | || | | || ||||||| ||| || || || || || ||||||||||| ||||| | Sbjct 142048 GCG-CTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGTCTCAGAGTGAA 142106 Query 794633 TGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| || || ||||||||| || || |||||| Sbjct 142107 TGTTCTCCATCATGATCTGGAAACCGTAGAAGCAG 142141 Score = 127 bits (140), Expect = 3e-23 Identities = 183/257 (71%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| |||||||| || || || |||||| |||||| |||||||||||||| | || Sbjct 141496 GACACCCGCCTTCTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAG 141555 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||| || |||||| | ||| ||||||| | | |||| ||||||| || || Sbjct 141556 CGAAATGTTCTCCATGAAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACCAAG 141615 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | | || || |||||||| ||||| || |||||| ||||||| | |||||||| Sbjct 141616 GGCAACGAGAAGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCAT 141675 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 |||| || || |||||| | |||| | | ||||| ||||| || |||| || || Sbjct 141676 ACCGAGAAGGGCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATC 141735 Query 794132 GATGATGATCTGCCTGG 794148 | ||||||| | ||||| Sbjct 141736 GGTGATGAT-TTCCTGG 141751 Score = 98.7 bits (108), Expect = 2e-14 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 796297 AGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 || || | |||||| || ||||| || || ||||||||||| |||||||||| ||| ||| Sbjct 142295 AGATCAATCTCCTCAGCAGTCCAGAACGAAGCCTCGGCCTTCTTGTACATCTGCCAAATC 142354 Query 796357 CGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 ||||| ||||||||| || || ||||| || |||||||| | ||||| ||||| Sbjct 142355 TCATGGTACTTGATGGGGAAAAGCACGAAGCGGTTAGGGTTCTCCTGCAGCAGAGGCTC 142413 >seq116 Length=85249 Score = 109 bits (120), Expect = 9e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| ||||| || || |||| ||| ||||| ||||||||||| || | ||||| || Sbjct 68714 CTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGA 68655 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | || || | ||| || | ||| Sbjct 68654 AGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCC 68595 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| |||||| || | || || | |||| || || ||||| ||||| Sbjct 68594 AATACCACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGTATCATAGATACCCTC 68535 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | ||| |||||||| ||| |||| | | || || Sbjct 68534 AATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACC 68475 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||| || ||||| Sbjct 68474 AGCATTGAACAGAGTGGG 68457 >seq5 Length=342721 Score = 96.9 bits (106), Expect = 5e-14 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||||||||| ||||| | || || ||| | || |||||||| || |||||| Sbjct 269696 GCTGCGAACTACCTCGATATCAAAGCTCTTCTTGATGTTGGCTGCAAGACAGTCGCCAAC 269755 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | || ||||||||||| || ||||| ||||| ||||| || |||||| Sbjct 269756 ATGATTAAGGGCAAGTCTCCTGAGGAAATCCGTAAGACTTTCAACATC 269803 >seq76 Length=114648 Score = 95.1 bits (104), Expect = 2e-13 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| || ||||||||| | ||||| || ||| | | Sbjct 8393 GTACTTGGTGACGGCCTTGGTACCCTCAGAAACGGCGTGCTTAGCCAGCTCACCGGGGAG 8334 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557 ||| || || |||| |||||| ||||| Sbjct 8333 GATGAGACGGACGGAGGTCTGAATCTC 8307 >seq42 Length=153607 Score = 89.7 bits (98), Expect = 8e-12 Identities = 157/224 (70%), Gaps = 10/224 (4%) Strand=Plus/Plus Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164 || ||||| ||||||||||| || || || || || || | || |||||||||| | Sbjct 54000 GAAGCCGTTCTCGAACTCAACGCCTCTGATGAACGTGGTATTGATGTCGTGCGTAACCGC 54059 Query 2019165 ATCAAGCATCACGCTTCG---AAAAGAA-TCGAC-CTGCCGCCCGGCCGCCACAAGGTGA 2019219 |||||| || ||| | ||||||| ||| ||||| | ||| | || || ||| Sbjct 54060 ATCAAG----AC-CTTTGCACAAAAGAAGGTGACGTTGCCGGCAGGCAGACATAAACTGA 54114 Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCA 2019279 ||||| | |||||||| || | | || |||| || || |||||| | || ||||| Sbjct 54115 TCATCTTGGATGAGGCGGATAGTATGACATCGGGTGCGCAACAGGCCTTGAGAAGGACCA 54174 Query 2019280 TGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 |||| | || | |||||||| |||||||| | || || ||| Sbjct 54175 TGGAGATTTATTCGAACACGACACGGTTTGCTTTTGCGTGTAAC 54218 >seq143 Length=70988 Score = 87.8 bits (96), Expect = 3e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 2411434 AGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGG 2411493 || || || |||| ||||| | |||||| ||| || | |||| | |||| | Sbjct 983 AGACCAGGAACCATAGGGTTCATGAGGTGGCAGCGGTTCTTGAAGCCGATTTTGGGCATG 1042 Query 2411494 TGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACG 2411553 ||| ||| || ||||||||||||||||||| | || ||||||| |||||||||| Sbjct 1043 GCATCGTGCGACAAACCAAAGATCTTGCGCTGGTCAAGGCCACCAAACTCGGCGTCGACG 1102 Query 2411554 TCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTA 2411591 || |||| || ||| || || ||||||||| ||||| Sbjct 1103 TCAAGGTACTCCTCATCCAGAAGCTGCATGAGAGGGTA 1140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916177894782716