Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 seq157 93.3 3e-14 >seq13 Length=240985 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || |||||||| || |||||||| || || | | |||||| Sbjct 38634 ACGAAGAACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACC 38575 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | |||| | ||||| ||||| ||||| ||||| || Sbjct 38574 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 38515 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | |||||| | || | || |||||| || ||||||||||| | Sbjct 38514 GTCCTG-AATCTTGGACTTGACATTGTCAATGGTATCAGAAGACTCAACTTCAAGAGTAA 38456 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||| || || || |||||||| Sbjct 38455 TGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 38419 >seq157 Length=65766 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 29599 TTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATC 29658 || |||||||| || || | || |||||| ||| || || || ||||||||| | ||| Sbjct 45138 TTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATC 45079 Query 29659 AATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCT 29718 | | ||||||||||| ||||| ||||| || || || | || |||||| | || Sbjct 45078 AGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 45019 Query 29719 ACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAAT 29778 | ||||| || || || || || || || || || || || | ||| ||||| || Sbjct 45018 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTAACGAAA 44959 Query 29779 ATCTGCATTTT 29789 |||||||| || Sbjct 44958 ATCTGCATCTT 44948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385216176510804