Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq116 136 4e-27
seq13 120 3e-22
seq3 109 5e-19
seq157 91.5 1e-13
>seq116
Length=85249
Score = 136 bits (150), Expect = 4e-27
Identities = 1058/1675 (63%), Gaps = 65/1675 (4%)
Strand=Plus/Minus
Query 148116 ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGC 148175
|| ||||| | ||||||||||| |||||||| | | ||||| | | |||| ||
Sbjct 69910 ATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATACTGGGGATGTTTTGA 69851
Query 148176 ACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCG 148235
| || ||| || |||| || | || ||| | || | | ||| || |||
Sbjct 69850 ATGGAACCGTTGTCGGCAATGATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCG 69791
Query 148236 ATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGC 148295
| ||| || || || || | || || ||||| ||||| || || || || || |||
Sbjct 69790 ACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGC 69731
Query 148296 AGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTC 148355
| || | |||| || | ||||| || ||||||||||||||| |||||||| ||
Sbjct 69730 TGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTA 69671
Query 148356 GTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG 148415
| || || |||||| || | || || |||||||| | |||| || || || |
Sbjct 69670 CTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGC 69611
Query 148416 CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCCACATGTCGTACT 148473
||| |||| | ||||||||| | || || || || |||| |||||| || |||
Sbjct 69610 TCCTTAAGAGAAGTCCAGTCCCAAA--GGTCACTGGGGGTGACGTCCCACATATCAAACT 69553
Query 148474 GCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533
| || || || || |||| ||||||||| | ||||| || | |
Sbjct 69552 GGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCTCAATTTGAG 69493
Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593
| ||||| |||||| || ||| ||| |||||| ||||| || || |||| |
Sbjct 69492 AGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCA 69433
Query 148594 ----GC-AGC-GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647
|| ||| | || ||| || | ||||| ||||| | || || || |
Sbjct 69432 ATTGGCGAGCTTCAGCTGAC------TCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAG 69379
Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707
|||| ||||| || ||||| |||||||| ||||| |||||| | | || |||
Sbjct 69378 CAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTGTAAGC-CTCG 69320
Query 148708 CGAGC-GGATAGTGGTTGCGGTCGATGAT-CTTGTCAAGATTGCGCACCACCACCTTTGT 148765
|| | || ||||||||| ||| ||||| | ||||| ||||| || || ||||| ||
Sbjct 69319 GGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAG-TTGCGAACAACAACCTTGGT 69261
Query 148766 AATTCTGCGCAGCAATTCAAAATCGT---ACTTG-TCATCTA--CGATGCATCGGTTCAC 148819
| | ||||| | || |||| | ||| | | || | | | | |
Sbjct 69260 GACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAG 69201
Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879
|| | ||||| || ||||| || || |||||| || || | ||||| | |||||
Sbjct 69200 AGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATACTCGATAATCTC 69141
Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939
| |||||| ||| || ||| |||| ||||| || |||||||| | ||||||
Sbjct 69140 AGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCA 69081
Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AAC 148997
||||||||||| |||| | || || || || || | |||| ||| |
Sbjct 69080 ATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAATGGCATA 69021
Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCT-GCTCGTAGCGACCCTCCTGCTCGTA--TAAA 149054
| | || | ||| || | | | | | | | |||||||||| || || |
Sbjct 69020 CCA--GAGCTTCTGAGC-CTTAATGGTTAGACGGCCACGACCCTCCTTTTCATACTTCTC 68964
Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114
||| | ||| |||||| | ||||||||||| || | || || ||||||| || |||
Sbjct 68963 GTACAGAGC--CTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGG 68906
Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174
||||| || | ||| | || | | | | |||||||| |||||||| || | |||
Sbjct 68905 CACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGATCAGGGATCCAC 68846
Query 149175 AGCGC---GTAC--ATGA-GGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228
|| || | || || | || |||| ||| || | | || | ||||||
Sbjct 68845 AGAGCAAGGAACAGATCACGGGCGCGAACCT---CCTCCTTGCCGTGATTCTTGCGG--- 68792
Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288
|| | ||| | |||| ||| || ||||| ||||||| || | || | || ||
Sbjct 68791 AGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACCG 68732
Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345
||| ||||| |||||||| || | || | ||||||| || || || | |||
Sbjct 68731 GGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATG 68672
Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCAC 149404
|| | || || | | ||| ||||| ||| ||| ||| | |||| || || |
Sbjct 68671 GGAACGATACCGTTAGAAGTACCGTTGGTACCAGC-GATGTAAGAGCCGGTAGCACGGAT 68613
Query 149405 TTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCG 149462
||| ||||||| ||| || || ||||| | ||| || || || | |||| |
Sbjct 68612 ACGGTGAACGTTGAGGCCAATACCACCCGCCAT-CTTGGAAATCATAGCACAAGTCTTCA 68554
Query 149463 AGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCAC 149522
|| || ||||| ||||| |||||||| ||||||| | ||| |||||||| |
Sbjct 68553 AG-GTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAG 68495
Query 149523 ATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTT 149581
| |||| | || || || ||||| |||||| || || || || | ||
Sbjct 68494 AGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTG 68435
Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCC 149638
|| | ||| | | ||| | ||| || || || || | ||||| | ||| | |||
Sbjct 68434 CTAG-ACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCA-CCCCA--AACGCC 68379
Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698
| || || ||||| | ||| ||||| || ||||| | | ||| ||| || ||
Sbjct 68378 AACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAAGCTTAAG 68319
Query 149699 CAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGG 149753
| ||| || || |||||| |||||||||||| |||| || || |||
Sbjct 68318 GAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATCACGG 68264
>seq13
Length=240985
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || ||||||||| | || | | | ||||| |||||||||||
Sbjct 38159 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCA-TCCTCAAGCTGCTTGCC 38101
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| ||||| ||||| |||||||| |||||| |||
Sbjct 38100 GGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 38041
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| | ||| || || | ||| | ||| || || ||||||||
Sbjct 38040 GACATTGTCGATAGTGTCGGAAGACTCAACCTCCAAGGTAATGGTCTTTCCAGTCAGAGT 37981
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 37980 CTTGACGAAAATCTGCAT 37963
Score = 113 bits (124), Expect = 4e-20
Identities = 131/174 (75%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| ||| | ||||| |||||||| ||
Sbjct 37931 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCA-TCCTCAAGCTGCTTTCC 37873
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct 37872 AGCAAATATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 37813
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | ||||||| || ||| || |||| ||||| ||| ||||||||
Sbjct 37812 GACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 37759
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || ||||| ||| || ||| ||| | ||||| |||||||| ||
Sbjct 38615 GTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCA-TCCTCAAGCTGCTTTCC 38557
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| || || ||||| |||||||| ||||| |||
Sbjct 38556 AGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 38497
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| || || | | ||| || || | || | ||| || || || || ||
Sbjct 38496 GACATTGTCAATGGTATCAGAAGACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGT 38437
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 38436 CTTGACGAAAATCTGCAT 38419
>seq3
Length=407529
Score = 109 bits (120), Expect = 5e-19
Identities = 147/201 (73%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | ||| | | | |||||||||||||||||
Sbjct 21562 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCA-TCCTCGAGCTGCTTGCC 21504
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || || ||||| ||||| || |||||| |||
Sbjct 21503 AGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTT 21444
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||| | | ||| || || | ||| | ||| || || ||||| ||
Sbjct 21443 GACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGT 21384
Query 133643 TTTTACGAAAATCTGCATGGC 133663
|| |||||| |||||||||
Sbjct 21383 CTTGACGAAA--CTGCATGGC 21365
>seq157
Length=65766
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| || | || || |||||||| || || || ||||| |||||
Sbjct 45105 TCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTA 45046
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || ||| || |||| ||| |
Sbjct 45045 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTAATC 44986
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || ||||||||||||||
Sbjct 44985 GTCTTACCCGTAAGGGTCTTAACGAAAATCTGCAT 44951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483416908462560
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