Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq116 136 4e-27 seq13 120 3e-22 seq3 109 5e-19 seq157 91.5 1e-13 >seq116 Length=85249 Score = 136 bits (150), Expect = 4e-27 Identities = 1058/1675 (63%), Gaps = 65/1675 (4%) Strand=Plus/Minus Query 148116 ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGC 148175 || ||||| | ||||||||||| |||||||| | | ||||| | | |||| || Sbjct 69910 ATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATACTGGGGATGTTTTGA 69851 Query 148176 ACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCG 148235 | || ||| || |||| || | || ||| | || | | ||| || ||| Sbjct 69850 ATGGAACCGTTGTCGGCAATGATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCG 69791 Query 148236 ATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGC 148295 | ||| || || || || | || || ||||| ||||| || || || || || ||| Sbjct 69790 ACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGC 69731 Query 148296 AGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTC 148355 | || | |||| || | ||||| || ||||||||||||||| |||||||| || Sbjct 69730 TGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTA 69671 Query 148356 GTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG 148415 | || || |||||| || | || || |||||||| | |||| || || || | Sbjct 69670 CTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGC 69611 Query 148416 CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCCACATGTCGTACT 148473 ||| |||| | ||||||||| | || || || || |||| |||||| || ||| Sbjct 69610 TCCTTAAGAGAAGTCCAGTCCCAAA--GGTCACTGGGGGTGACGTCCCACATATCAAACT 69553 Query 148474 GCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533 | || || || || |||| ||||||||| | ||||| || | | Sbjct 69552 GGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCTCAATTTGAG 69493 Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 | ||||| |||||| || ||| ||| |||||| ||||| || || |||| | Sbjct 69492 AGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCA 69433 Query 148594 ----GC-AGC-GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 || ||| | || ||| || | ||||| ||||| | || || || | Sbjct 69432 ATTGGCGAGCTTCAGCTGAC------TCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAG 69379 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 |||| ||||| || ||||| |||||||| ||||| |||||| | | || ||| Sbjct 69378 CAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTGTAAGC-CTCG 69320 Query 148708 CGAGC-GGATAGTGGTTGCGGTCGATGAT-CTTGTCAAGATTGCGCACCACCACCTTTGT 148765 || | || ||||||||| ||| ||||| | ||||| ||||| || || ||||| || Sbjct 69319 GGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAG-TTGCGAACAACAACCTTGGT 69261 Query 148766 AATTCTGCGCAGCAATTCAAAATCGT---ACTTG-TCATCTA--CGATGCATCGGTTCAC 148819 | | ||||| | || |||| | ||| | | || | | | | | Sbjct 69260 GACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAG 69201 Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879 || | ||||| || ||||| || || |||||| || || | ||||| | ||||| Sbjct 69200 AGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATACTCGATAATCTC 69141 Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 | |||||| ||| || ||| |||| ||||| || |||||||| | |||||| Sbjct 69140 AGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCA 69081 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AAC 148997 ||||||||||| |||| | || || || || || | |||| ||| | Sbjct 69080 ATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAATGGCATA 69021 Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCT-GCTCGTAGCGACCCTCCTGCTCGTA--TAAA 149054 | | || | ||| || | | | | | | | |||||||||| || || | Sbjct 69020 CCA--GAGCTTCTGAGC-CTTAATGGTTAGACGGCCACGACCCTCCTTTTCATACTTCTC 68964 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 ||| | ||| |||||| | ||||||||||| || | || || ||||||| || ||| Sbjct 68963 GTACAGAGC--CTCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGG 68906 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 ||||| || | ||| | || | | | | |||||||| |||||||| || | ||| Sbjct 68905 CACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGATCAGGGATCCAC 68846 Query 149175 AGCGC---GTAC--ATGA-GGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 || || | || || | || |||| ||| || | | || | |||||| Sbjct 68845 AGAGCAAGGAACAGATCACGGGCGCGAACCT---CCTCCTTGCCGTGATTCTTGCGG--- 68792 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 || | ||| | |||| ||| || ||||| ||||||| || | || | || || Sbjct 68791 AGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACCG 68732 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 ||| ||||| |||||||| || | || | ||||||| || || || | ||| Sbjct 68731 GGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATG 68672 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCAC 149404 || | || || | | ||| ||||| ||| ||| ||| | |||| || || | Sbjct 68671 GGAACGATACCGTTAGAAGTACCGTTGGTACCAGC-GATGTAAGAGCCGGTAGCACGGAT 68613 Query 149405 TTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCG 149462 ||| ||||||| ||| || || ||||| | ||| || || || | |||| | Sbjct 68612 ACGGTGAACGTTGAGGCCAATACCACCCGCCAT-CTTGGAAATCATAGCACAAGTCTTCA 68554 Query 149463 AGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCAC 149522 || || ||||| ||||| |||||||| ||||||| | ||| |||||||| | Sbjct 68553 AG-GTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAG 68495 Query 149523 ATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTT 149581 | |||| | || || || ||||| |||||| || || || || | || Sbjct 68494 AGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTG 68435 Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCC 149638 || | ||| | | ||| | ||| || || || || | ||||| | ||| | ||| Sbjct 68434 CTAG-ACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTGTCA-CCCCA--AACGCC 68379 Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698 | || || ||||| | ||| ||||| || ||||| | | ||| ||| || || Sbjct 68378 AACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAAGCTTAAG 68319 Query 149699 CAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGG 149753 | ||| || || |||||| |||||||||||| |||| || || ||| Sbjct 68318 GAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAATCACGG 68264 >seq13 Length=240985 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||||||| | || | | | ||||| ||||||||||| Sbjct 38159 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCA-TCCTCAAGCTGCTTGCC 38101 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 38100 GGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 38041 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||| || || | ||| | ||| || || |||||||| Sbjct 38040 GACATTGTCGATAGTGTCGGAAGACTCAACCTCCAAGGTAATGGTCTTTCCAGTCAGAGT 37981 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 37980 CTTGACGAAAATCTGCAT 37963 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| || ||| ||| | ||||| |||||||| || Sbjct 37931 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCA-TCCTCAAGCTGCTTTCC 37873 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 37872 AGCAAATATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 37813 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||||| || ||| || |||| ||||| ||| |||||||| Sbjct 37812 GACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 37759 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| ||| || ||| ||| | ||||| |||||||| || Sbjct 38615 GTGGATTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCA-TCCTCAAGCTGCTTTCC 38557 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 38556 AGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 38497 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | | ||| || || | || | ||| || || || || || Sbjct 38496 GACATTGTCAATGGTATCAGAAGACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGT 38437 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 38436 CTTGACGAAAATCTGCAT 38419 >seq3 Length=407529 Score = 109 bits (120), Expect = 5e-19 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | ||| | | | ||||||||||||||||| Sbjct 21562 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCA-TCCTCGAGCTGCTTGCC 21504 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || ||||| ||||| || |||||| ||| Sbjct 21503 AGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTT 21444 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || || | ||| | ||| || || ||||| || Sbjct 21443 GACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGT 21384 Query 133643 TTTTACGAAAATCTGCATGGC 133663 || |||||| ||||||||| Sbjct 21383 CTTGACGAAA--CTGCATGGC 21365 >seq157 Length=65766 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || | || || |||||||| || || || ||||| ||||| Sbjct 45105 TCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCCTTA 45046 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||| | Sbjct 45045 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTAATC 44986 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || |||||||||||||| Sbjct 44985 GTCTTACCCGTAAGGGTCTTAACGAAAATCTGCAT 44951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416908462560