Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq46 192 8e-43 seq116 93.3 6e-13 >seq46 Length=146035 Score = 192 bits (212), Expect = 8e-43 Identities = 393/572 (69%), Gaps = 24/572 (4%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||| ||||||| || ||||| |||||||| || || ||||||||| ||||| | Sbjct 142413 GAGCCTCTGCTGCAGGAGAACCCTAACCGCTTCGTGCTTTTCCCCATCAAGTACCATGAG 142354 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGA--- 1455832 || ||| | |||||| || ||||||||||| || || ||||| || |||||| | || Sbjct 142353 ATTTGGCAGATGTAC-AAGAAGGCCGAGGCTTCGTTCTGGACTGCTGAGGAGATTGATCT 142295 Query 1455833 -CCTCGGCGCCGACACGGTCCACTGG--GTGTCGC-TGAGCGACGACGAGCGCCATTTCA 1455888 || | | |||| ||||| ||| ||| | | || |||| || | Sbjct 142294 GTCTAAGGATCTTCACG----ACTGGAACAACCGCATGAACAAGGATGAGCAGTTCTTTA 142239 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||| | |||| |||| || || || |||||||| ||| ||||||||| | Sbjct 142238 TCTCTCACATTCTCG-CTTTCTTTGCTGCTTCTGATGGCATTGTGAACGAGAACCTTGTT 142180 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | |||||| ||||| || | || ||||| || | || ||||| ||||||||| Sbjct 142179 GAGCGCTTTTCCGCTGAGGTTCAGGTTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATC 142120 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||| |||||||| |||||||| || ||||| || || ||| ||||||| Sbjct 142119 ATGATGGAGAACATTCACTCTGAGACCTACTCCCTGCTGATTGATACTTACATCAAGGAG 142060 Query 1456069 CCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127 || | | || | || | |||||| |||||| ||||| | || | | | || Sbjct 142059 CCCGCCCAG-CGCACTTATCTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGCAA 142001 Query 1456128 GGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184 |||||| ||||| |||||||||| | ||||||| || || |||||| |||| Sbjct 142000 GGCCGATTGGGCCCTGAAGTGGATTGCCGACAAGGA----ATCCAC-CTTTGCTCAGCGC 141946 Query 1456185 CTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTT 1456243 ||||| | ||||| | ||||||||| ||||| ||||| || || | ||||||| Sbjct 141945 CTCGTTGCTTTTGCGGCCGTCGAGGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTC 141886 Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||| | ||||| || |||||||| || || Sbjct 141885 TGGTTGCGCAAGCGTGGTCTCATGCCTGGCCT 141854 Score = 89.7 bits (98), Expect = 7e-12 Identities = 174/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| || |||| || ||||| ||||| | | |||| | ||||| || Sbjct 141744 ATCATCACCGATGCTGTCGCTATTGAGAAGGAGTTCCTTACCGAGGCCCTGCCCTGTGCC 141685 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||| |||||||| | |||||| |||||| || || || |||||||| | Sbjct 141684 CTTCTCGGTATGAACGCTGAC-CTCATGAAGACGTACATCGAGTTC-GTTGCCGACCGTC 141627 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || || || || ||||| |||| | | ||||||| ||| | ||| Sbjct 141626 TTCTCGTTGCCCTTGGTAACG-AGAAGGTCTACAAGGCTTCCAACCCCTTCGACTTCATG 141568 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || ||||| | |||||||||||||| |||||| |||| ||| || ||| Sbjct 141567 GAGAACATTTCGCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGATTACCAG 141508 Query 1456762 AAGGCCGGCGTC 1456773 ||||| || ||| Sbjct 141507 AAGGCGGGTGTC 141496 >seq116 Length=85249 Score = 93.3 bits (102), Expect = 6e-13 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| |||||| | | |||||| | ||||||||| | |||| |||| | |||| Sbjct 69013 AGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGAAACCCCTTCATGTTGTACA 69072 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAAC 262210 ||||| ||||| || ||||||||| |||| ||||| |||| | ||| ||||| Sbjct 69073 AGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGTACCATCCGCAGCT-CCAAC 69131 Query 262211 CTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTCG 262270 |||||||| ||||| || ||| || | || |||| ||| |||||||| | Sbjct 69132 CTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTTGCTGTTTGCAACCTTGCC 69191 Query 262271 AGCGTGGCCCTGCCCAAGTTTGT 262293 | |||| || ||| |||||| Sbjct 69192 TCCTTGGCTCTCCCCGCGTTTGT 69214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177749085016328