Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq116 215 6e-51
seq46 145 1e-29
seq260 98.7 1e-15
>seq116
Length=85249
Score = 215 bits (238), Expect = 6e-51
Identities = 952/1490 (64%), Gaps = 39/1490 (3%)
Strand=Plus/Minus
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
|||||||| || ||| | | | |||||||||| | ||||||||||| ||||| ||
Sbjct 69754 AACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCG 69695
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|| || |||| || || | || ||| || ||||| || || | | |||| |||
Sbjct 69694 TTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTG 69635
Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGG 110858
|||| ||| |||| |||||| | ||||| ||| | ||||| | || | | || ||
Sbjct 69634 CGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCA-CTGGG 69576
Query 110859 TTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGG 110918
| | | |||||||| |||||||| || | || ||||| ||||||| ||||| |||
Sbjct 69575 GGTGA-CGTCCCACATATCAAACTGGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGG 69517
Query 110919 TTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACA 110978
|| || | ||| | || || | || || ||||||||| | ||||| || |
Sbjct 69516 TTGAGTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAA 69457
Query 110979 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 111038
|||| |||||||| ||| |||| | |||||| |||| ||||| | | | ||
Sbjct 69456 TGGTCTCAAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAA-GGGCATGCGC 69398
Query 111039 ACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 111097
| | | || |||| || ||||| |||||||||| |||||| || | ||| |||||
Sbjct 69397 AGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATG 69338
Query 111098 TTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 111154
|| || | | || ||| |||||| || || |||||||| ||||| |
Sbjct 69337 TT--GCTGTTG-TAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAG 69281
Query 111155 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAG---TGCGAGTC 111211
|| ||||| ||| |||| || || || || | | || | | || ||
Sbjct 69280 TTGCGAACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTG 69221
Query 111212 TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271
| ||| ||| || || || || | || || | ||||||||||| ||||||
Sbjct 69220 TAGTCA---ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCA 69164
Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331
| | ||||| | ||| || || || | |||||| || || || |||| ||||
Sbjct 69163 GGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTC 69104
Query 111332 TTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391
|| ||||| |||||| |||||| |||||||| | |||| |||| | || |||||
Sbjct 69103 TTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCG 69044
Query 111392 GTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGG--CGTTGGCC 111448
|| || | | ||||| || | ||| | | || | | || ||||| | ||||
Sbjct 69043 GTTTGGGCCTCCAGAATGGCATACCAGAGCTTCTGAGCCT----TAATGGTTAGACGGCC 68988
Query 111449 -CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 111507
|| |||||| || ||||| ||| || || || || || || || ||| |
Sbjct 68987 ACGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGC 68928
Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTT 111567
|| || || || || || || | |||| ||| | |||| | ||||| |||||
Sbjct 68927 CAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTT 68868
Query 111568 CATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTC 111627
|||||| || || || |||||||| | || ||||| | ||| |||| || |
Sbjct 68867 CATGAACAGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTT 68808
Query 111628 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 111687
|| || || || | || |||||||| | | || || ||||| |||||||||||
Sbjct 68807 GCCGTGATTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATA 68748
Query 111688 GACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGC 111741
| || | || || ||||| ||| | || | ||||| || || |||
Sbjct 68747 AATAGCAAAAGCACC---GGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTT 68691
Query 111742 GTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACG 111801
||| || || || ||||| |||| ||||| | || ||| || || || ||
Sbjct 68690 GTTGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTA 68631
Query 111802 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 111861
||| | || | | | || | || | |||||||| || ||| ||| || ||
Sbjct 68630 AGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAAT 68571
Query 111862 TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGAT 111921
||||| | | | || |||||||||| | || ||| ||||| || | |
Sbjct 68570 CATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAAC 68511
Query 111922 AAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 111981
|||||||| || | ||||| || |||||||||||||| || || || | |||
Sbjct 68510 CAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGC 68451
Query 111982 GTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039
||| ||| | | |||| ||||| || ||| ||||||| ||| || | |
Sbjct 68450 ATGAGTGA--AGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTG 68393
Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATG 112099
|| || | ||| | || || ||||||| ||||| ||| ||| || | | ||
Sbjct 68392 TCACCCCAAACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTG 68333
Query 112100 CCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
||||| ||| | |||||| ||| ||||| |||| ||||||||
Sbjct 68332 CCATCAAGCTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTA 68283
>seq46
Length=146035
Score = 145 bits (160), Expect = 1e-29
Identities = 537/831 (65%), Gaps = 53/831 (6%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || || || |||||||| |||||||||||||| ||| |||| |||||| |||||
Sbjct 141512 TAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATG 141571
Query 122431 AAGTCAAATGGATT---------------CTTCGCGTTCCAAATGGGTGGCACCCCAACT 122475
||||| || || || |||| |||| | || || ||||
Sbjct 141572 AAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACCAAGGG---------CAAC- 141621
Query 122476 TGTTTGAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATA 122535
||| ||||| || | || |||| |||||| ||| |||| |||||||
Sbjct 141622 -----GAGAAGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATA 141676
Query 122536 CCGATGAGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCT 122595
|||| ||| ||| || || || || | |||| | |||||||| | || || ||
Sbjct 141677 CCGAGAAGGGCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCG 141736
Query 122596 TTCACGATGGCGTGGAT-AGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGC 122652
| | ||| | ||||| |||| | | ||| | | | || | || | |||||
Sbjct 141737 GTGATGATTTCCTGGATCAGTTGCTTGCTAGGGCGGTTGTTGAGGTGAGAGTACAAGAGG 141796
Query 122653 TCCACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCAT 122712
|| |||||| || ||| |||||||| || || ||||| || ||||| || ||
Sbjct 141797 --CA-GGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTC 141853
Query 122713 AGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAG 122772
|| || ||||||||||| ||||| |||||| | || | | || | |||||||||
Sbjct 141854 AGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAG 141913
Query 122773 AAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-C 122831
||||||||||| || |||||| |||| ||||| | || |||| | || | ||| |
Sbjct 141914 AAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTG-GATTCCTTGTC 141972
Query 122832 ATCAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891
||| ||| |||| ||||| | ||||| ||| || || | || | |||||
Sbjct 141973 GGCAATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGC 142032
Query 122892 TTCAA----ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTG 122947
| || |||| ||| || | | ||||| ||||| | ||||||| |
Sbjct 142033 GTTAAAGAGATAAGTGC-GCTGGGCGG---GCTCCTTGATGTAAGTATCAATCAGCAGGG 142088
Query 122948 AATATGTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCT 123006
| || || || |||| | | ||| ||| | || | ||||||| |||| ||
Sbjct 142089 AGTAGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCAGCGAGCC 142147
Query 123007 TCGCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCG 123066
||| | |||||||||| | | ||| | | | ||||| ||||| |||||
Sbjct 142148 TCGGGAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCA 142207
Query 123067 GACCCAGCAAAGAATGCCAGGATGT---ACTTTATGAATTTCTTTTCATT-TTCATTCAG 123122
|| |||||||||| || || |||| | | | ||| | || || || ||||| | |
Sbjct 142208 GAAGCAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGC-G 142266
Query 123123 GGTCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
| | |||||||||| |||||| || |||| ||||| || || ||||||||
Sbjct 142267 GTTGTTCCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 142317
>seq260
Length=29797
Score = 98.7 bits (108), Expect = 1e-15
Identities = 212/313 (68%), Gaps = 8/313 (3%)
Strand=Plus/Plus
Query 11629 CGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 11688
||||||||||||||||||||||| ||| || || ||| | || || | | || ||
Sbjct 13886 CGCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAG 13945
Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGA-GC 11747
||| ||||| | | || ||||||||||||||||| || || | || |||| |
Sbjct 13946 ATCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACAC 14005
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
||| || |||||| || || || || || | || ||| || | ||||| || |
Sbjct 14006 ACT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGG 14064
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC---ACTTCCAAAAT 11864
|||| || |||| |||| ||| || || || ||||||||||| || | || |
Sbjct 14065 TACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACT 14124
Query 11865 ATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAA 11924
||||||||| ||| || || | |||| ||| || ||| | || ||| |||| |
Sbjct 14125 ---TCTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCA 14181
Query 11925 TCCCCTCAACATC 11937
| || | |||||
Sbjct 14182 TGCCGGCGACATC 14194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026944342400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |