Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq116 215 6e-51 seq46 145 1e-29 seq260 98.7 1e-15 >seq116 Length=85249 Score = 215 bits (238), Expect = 6e-51 Identities = 952/1490 (64%), Gaps = 39/1490 (3%) Strand=Plus/Minus Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 |||||||| || ||| | | | |||||||||| | ||||||||||| ||||| || Sbjct 69754 AACTCACCAGCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCG 69695 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 || || |||| || || | || ||| || ||||| || || | | |||| ||| Sbjct 69694 TTGTTGCCCAGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTG 69635 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGG 110858 |||| ||| |||| |||||| | ||||| ||| | ||||| | || | | || || Sbjct 69634 CGAACACCGTTCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCA-CTGGG 69576 Query 110859 TTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGG 110918 | | | |||||||| |||||||| || | || ||||| ||||||| ||||| ||| Sbjct 69575 GGTGA-CGTCCCACATATCAAACTGGAGGATACCCTGGGAGACGGGAGAGCCCTCGTAGG 69517 Query 110919 TTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACA 110978 || || | ||| | || || | || || ||||||||| | ||||| || | Sbjct 69516 TTGAGTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAA 69457 Query 110979 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 111038 |||| |||||||| ||| |||| | |||||| |||| ||||| | | | || Sbjct 69456 TGGTCTCAAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAA-GGGCATGCGC 69398 Query 111039 ACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 111097 | | | || |||| || ||||| |||||||||| |||||| || | ||| ||||| Sbjct 69397 AGAGCTAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATG 69338 Query 111098 TTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 111154 || || | | || ||| |||||| || || |||||||| ||||| | Sbjct 69337 TT--GCTGTTG-TAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAG 69281 Query 111155 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAG---TGCGAGTC 111211 || ||||| ||| |||| || || || || | | || | | || || Sbjct 69280 TTGCGAACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTG 69221 Query 111212 TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271 | ||| ||| || || || || | || || | ||||||||||| |||||| Sbjct 69220 TAGTCA---ACAAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCA 69164 Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331 | | ||||| | ||| || || || | |||||| || || || |||| |||| Sbjct 69163 GGAGCACAATACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTC 69104 Query 111332 TTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391 || ||||| |||||| |||||| |||||||| | |||| |||| | || ||||| Sbjct 69103 TTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCG 69044 Query 111392 GTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGG--CGTTGGCC 111448 || || | | ||||| || | ||| | | || | | || ||||| | |||| Sbjct 69043 GTTTGGGCCTCCAGAATGGCATACCAGAGCTTCTGAGCCT----TAATGGTTAGACGGCC 68988 Query 111449 -CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 111507 || |||||| || ||||| ||| || || || || || || || ||| | Sbjct 68987 ACGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCGAATTCATCGCCGTAGCAGTCAGC 68928 Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTT 111567 || || || || || || || | |||| ||| | |||| | ||||| ||||| Sbjct 68927 CAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTT 68868 Query 111568 CATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTC 111627 |||||| || || || |||||||| | || ||||| | ||| |||| || | Sbjct 68867 CATGAACAGATCAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTT 68808 Query 111628 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 111687 || || || || | || |||||||| | | || || ||||| ||||||||||| Sbjct 68807 GCCGTGATTCTTGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATA 68748 Query 111688 GACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGC 111741 | || | || || ||||| ||| | || | ||||| || || ||| Sbjct 68747 AATAGCAAAAGCACC---GGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTT 68691 Query 111742 GTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACG 111801 ||| || || || ||||| |||| ||||| | || ||| || || || || Sbjct 68690 GTTGAAGACACGGAGCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTA 68631 Query 111802 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 111861 ||| | || | | | || | || | |||||||| || ||| ||| || || Sbjct 68630 AGAGCCGGTAGCACGGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAAT 68571 Query 111862 TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGAT 111921 ||||| | | | || |||||||||| | || ||| ||||| || | | Sbjct 68570 CATAGCACAAGTCTTCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAAC 68511 Query 111922 AAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 111981 |||||||| || | ||||| || |||||||||||||| || || || | ||| Sbjct 68510 CAGGAAGCACGAAGAGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGC 68451 Query 111982 GTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039 ||| ||| | | |||| ||||| || ||| ||||||| ||| || | | Sbjct 68450 ATGAGTGA--AGAACTTGCTAGACATGAGGTTGTAAGTCTCCAGAACACGCTCGACATTG 68393 Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATG 112099 || || | ||| | || || ||||||| ||||| ||| ||| || | | || Sbjct 68392 TCACCCCAAACGCCAACAGCAACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTG 68333 Query 112100 CCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 ||||| ||| | |||||| ||| ||||| |||| |||||||| Sbjct 68332 CCATCAAGCTTAAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTA 68283 >seq46 Length=146035 Score = 145 bits (160), Expect = 1e-29 Identities = 537/831 (65%), Gaps = 53/831 (6%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || || || |||||||| |||||||||||||| ||| |||| |||||| ||||| Sbjct 141512 TAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATG 141571 Query 122431 AAGTCAAATGGATT---------------CTTCGCGTTCCAAATGGGTGGCACCCCAACT 122475 ||||| || || || |||| |||| | || || |||| Sbjct 141572 AAGTCGAAGGGGTTGGAAGCCTTGTAGACCTTCTCGTTACCAAGGG---------CAAC- 141621 Query 122476 TGTTTGAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATA 122535 ||| ||||| || | || |||| |||||| ||| |||| ||||||| Sbjct 141622 -----GAGAAGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATA 141676 Query 122536 CCGATGAGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCT 122595 |||| ||| ||| || || || || | |||| | |||||||| | || || || Sbjct 141677 CCGAGAAGGGCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGCATCG 141736 Query 122596 TTCACGATGGCGTGGAT-AGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGC 122652 | | ||| | ||||| |||| | | ||| | | | || | || | ||||| Sbjct 141737 GTGATGATTTCCTGGATCAGTTGCTTGCTAGGGCGGTTGTTGAGGTGAGAGTACAAGAGG 141796 Query 122653 TCCACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCAT 122712 || |||||| || ||| |||||||| || || ||||| || ||||| || || Sbjct 141797 --CA-GGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTC 141853 Query 122713 AGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAG 122772 || || ||||||||||| ||||| |||||| | || | | || | ||||||||| Sbjct 141854 AGGCCAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAG 141913 Query 122773 AAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-C 122831 ||||||||||| || |||||| |||| ||||| | || |||| | || | ||| | Sbjct 141914 AAGATACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGCAAAGGTG-GATTCCTTGTC 141972 Query 122832 ATCAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891 ||| ||| |||| ||||| | ||||| ||| || || | || | ||||| Sbjct 141973 GGCAATCCACTTCAGGGCCCAATCGGCCTTGCGGCGAATGCAGGGAATGGTGTCAATGGC 142032 Query 122892 TTCAA----ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTG 122947 | || |||| ||| || | | ||||| ||||| | ||||||| | Sbjct 142033 GTTAAAGAGATAAGTGC-GCTGGGCGG---GCTCCTTGATGTAAGTATCAATCAGCAGGG 142088 Query 122948 AATATGTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCT 123006 | || || || |||| | | ||| ||| | || | ||||||| |||| || Sbjct 142089 AGTAGGTCTCAGAGTGAATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCAGCGAGCC 142147 Query 123007 TCGCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCG 123066 ||| | |||||||||| | | ||| | | | ||||| ||||| ||||| Sbjct 142148 TCGGGAACCTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCA 142207 Query 123067 GACCCAGCAAAGAATGCCAGGATGT---ACTTTATGAATTTCTTTTCATT-TTCATTCAG 123122 || |||||||||| || || |||| | | | ||| | || || || ||||| | | Sbjct 142208 GAAGCAGCAAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGC-G 142266 Query 123123 GGTCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 | | |||||||||| |||||| || |||| ||||| || || |||||||| Sbjct 142267 GTTGTTCCAGTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 142317 >seq260 Length=29797 Score = 98.7 bits (108), Expect = 1e-15 Identities = 212/313 (68%), Gaps = 8/313 (3%) Strand=Plus/Plus Query 11629 CGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 11688 ||||||||||||||||||||||| ||| || || ||| | || || | | || || Sbjct 13886 CGCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAG 13945 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGA-GC 11747 ||| ||||| | | || ||||||||||||||||| || || | || |||| | Sbjct 13946 ATCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACAC 14005 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 ||| || |||||| || || || || || | || ||| || | ||||| || | Sbjct 14006 ACT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGG 14064 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC---ACTTCCAAAAT 11864 |||| || |||| |||| ||| || || || ||||||||||| || | || | Sbjct 14065 TACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACT 14124 Query 11865 ATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAA 11924 ||||||||| ||| || || | |||| ||| || ||| | || ||| |||| | Sbjct 14125 ---TCTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCA 14181 Query 11925 TCCCCTCAACATC 11937 | || | ||||| Sbjct 14182 TGCCGGCGACATC 14194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026944342400