Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq116 221 1e-52
seq46 116 4e-21
seq95 107 2e-18
seq260 98.7 1e-15
>seq116
Length=85249
Score = 221 bits (244), Expect = 1e-52
Identities = 901/1399 (64%), Gaps = 41/1399 (3%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG---ATTC 104277
||| ||| ||||| ||||||| || || | || || ||||| |||| || |
Sbjct 68348 CCCCCAGCACATGATCATGCGTGTTGCTGTTGGCGTT--TGGGGT-GACAATGTCGAGCG 68404
Query 104278 TGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACC 104335
||| ||||||| ||| || ||||| |||| | | ||| ||| ||| | || ||
Sbjct 68405 TGTTCTGGAGACTTACAACCTCATGTCTAGCAAGTTCT--TCACTCATGCATCCCCCACT 68462
Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395
|| |||||||||||||| || | || | || |||||||| | | || |||
Sbjct 68463 CTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCTTCGTGCTTCCTGGTTGACATGAAG 68522
Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455
|| ||| || | |||||||||| || | | | ||||| || || ||| |
Sbjct 68523 GATGACAGCATTGAGGGTATCTATGATACCTTGAAGACTTGTGCTATGATTTCCAAGATG 68582
Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515
|| || |||||||| | || | || | | | || | ||| || ||
Sbjct 68583 GCGGGTGGTATTGGCCTCAACGTTCACCGTATCCGTGCTACCGGCTCTTACATCGCTGGT 68642
Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575
|| || ||| || | ||||| |||| ||||| || || || ||| ||| || ||
Sbjct 68643 ACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCCCGT 68702
Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629
||||| | || | ||| ||||| || || | || | |||||||||||
Sbjct 68703 TATGTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCTTTTGCTATTTATCTTGAGCCT 68759
Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689
||||| || || | | |||||||| || | || || || || | |||||||
Sbjct 68760 TGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAGGTT 68819
Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
|| ||| ||||| ||| ||||| ||||| || ||||| ||||||||| | |||||
Sbjct 68820 CGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATTGAG 68879
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
||| ||| | ||| |||| | || || || || ||||| || | || |
Sbjct 68880 AAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTAC 68939
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG--CGACTGCGA 104867
|| || || || || || || ||| ||||| || | || ||||| | || || |
Sbjct 68940 GGCGATGAATTCGAGGCTCTGTACGAGAAGTATGAAAAGGAGGGTCGTGGCCGTCTA--A 68997
Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
| | ||| | || | | ||| | || ||||| || | ||||||||||| || |
Sbjct 68998 CCATTAAGGCT-CAGAAGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGAAAC 69056
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| | |||| | ||||| ||| || |||| ||||| || || |||||| |||||
Sbjct 69057 CCCTTCATGTTGTACAAGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGTACC 69116
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
||| || ||||| || || || || || | || | | | |||||| |||
Sbjct 69117 ATCCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTTGCT 69176
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATT 105105
|| || ||||| || || | ||||||||| || ||| || | || |||| |||
Sbjct 69177 GTTTGCAACCTTGCCTCCTTGGCTCTCCCCGCGTTTGTTGACTACACCAACAACT-CATA 69235
Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165
|| | | || || ||||| || || || ||| ||| | ||| | | ||
Sbjct 69236 CGACTTCCAGAAGCTGCACGAGGTCACCAAGGTTGTTGTTCGCAACTTGAACCGCATCAT 69295
Query 105166 TGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222
||| || ||||||||| ||| || | | | | || ||| | ||||||||
Sbjct 69296 TGACGTCAACCACTACCCCGTTCCCGAGGCT--TACAACAGC-AACATGCGCCACCGTCC 69352
Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTG 105281
|||||| | |||||||||||||| || |||| ||| | || || ||| | ||||
Sbjct 69353 CATTGGTGTGGGTGTTCAGGGTCTTGCTGATGCCTTCCTAGCTCTG-CGCATGCCCTTTG 69411
Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341
| || | ||||| || | || | | || ||||||||||| || ||||||||||
Sbjct 69412 AGTCAGCTGAAGCTCGCCAATTGAACACTCAGATCTTTGAGACCATTTACCACGCCGCTC 69471
Query 105342 TTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401
| |||||| || ||| | | | |||| ||| | || ||||| ||||| ||||
Sbjct 69472 TGGAGGCGTCTTGCGAGATCTCTCAAATTGAGGGTACGTACTCAACCTACGAGGGCTCTC 69531
Query 105402 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC---T 105458
| | || || || | || || ||||||||||||| | || | || || | || |
Sbjct 69532 CCGTCTCCCAGGGTATCCTCCAGTTTGATATGTGGG-ACGTCACCCCCAG--TGACCTTT 69588
Query 105459 ACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518
|||||| |||| ||||| | |||||| |||| ||| |||| ||| ||| |||
Sbjct 69589 GGGACTGGACTTCTCTTAAGGAGCAGATCAAGAAGAACGGTGTTCGCAACTCTCTTCTCC 69648
Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578
| ||||| ||||| || ||| || | || || |||| || || || ||||| ||||
Sbjct 69649 TTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTCTGGGCAACAACGAGTGCTTCGAAC 69708
Query 105579 CCTACACGACGAACATCTA 105597
| ||||| | ||||||||
Sbjct 69709 CATACACCTCCAACATCTA 69727
>seq46
Length=146035
Score = 116 bits (128), Expect = 4e-21
Identities = 173/243 (71%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
|||||| | ||||| | || |||| || |||| || || |||||||| |||||
Sbjct 142041 CTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGCCGATTGGGCCCTGAAG 141982
Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
||| ||| |||| | | |||||||| |||| ||| | || |||||| || ||
Sbjct 141981 TGGATTGCCGACAAGGAATCCA-CCTTTGCTCAGCGCCTCGTTGCTTTTGCGGCCGTCGA 141923
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||||| ||| |||| | | || | ||| | ||||| ||||||||
Sbjct 141922 GGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCGCAAGCGTGGTCTCAT 141863
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952
||| || || || ||||| ||||| || |||||||||||||| || ||| || ||
Sbjct 141862 GCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGACGAGGGTCTTCACACCGACTT 141803
Query 94953 TGC 94955
|||
Sbjct 141802 TGC 141800
>seq95
Length=100549
Score = 107 bits (118), Expect = 2e-18
Identities = 172/246 (70%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 168455 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 168514
||||| |||||| ||||| | |||||| | ||||| ||||| ||| |||| |
Sbjct 78922 GCATCGGAACCACCAGCAAGACGAGAACCAAAGTTACCACTGGGCTCCAGACAGTTGACA 78981
Query 168515 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCA 168574
||||| ||||| | |||| | ||| | || |||||| | | || || |||||
Sbjct 78982 TTGTTGGAACCGACAAAGTCCTGCGCAAGACCGATAATCGTTTGCTGCAGGGAAGCTTCA 79041
Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 168634
||||| |||||||| | | | | ||| | | ||||||| | | || ||||| |
Sbjct 79042 CCGTGTTGGTACGCGGTTTGACCCGAGACGTAACCAGCCAACTCCACAACCTTCAT---A 79098
Query 168635 TCCTTGAGATTCTTG---TGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGA 168691
||||||| | | ||| | ||| || |||||||| || |||||||| ||||||||||
Sbjct 79099 TCCTTGACAATGTTGCTCTTGAAACAGGCGTACATGACTTTGCGTTGACCAGGCTTGAGA 79158
Query 168692 CCATCC 168697
||||||
Sbjct 79159 CCATCC 79164
>seq260
Length=29797
Score = 98.7 bits (108), Expect = 1e-15
Identities = 213/316 (67%), Gaps = 2/316 (1%)
Strand=Plus/Plus
Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763
|||||||||||||||||||||| ||||| || ||| | || || | || |||
Sbjct 13887 GCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAGA 13946
Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9822
|| || |||||| | || ||||||||||||||||| || || | || | || |||
Sbjct 13947 TCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACACA 14006
Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882
| || ||| || || ||| || || || | || ||| || | |||||||| ||
Sbjct 14007 CT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGGT 14065
Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9942
||| || |||| || | |||||| || ||||||||||| || | | | | |
Sbjct 14066 ACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACTT 14125
Query 9943 CTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 10002
||| |||| |||||| || | |||| || | ||| | || || |||| || ||
Sbjct 14126 CTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCATGCC 14185
Query 10003 CTCAACATCGGTAAAC 10018
| ||||||| ||||
Sbjct 14186 GGCGACATCGGCAAAC 14201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583256104750560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |