Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq116 221 1e-52 seq46 116 4e-21 seq95 107 2e-18 seq260 98.7 1e-15 >seq116 Length=85249 Score = 221 bits (244), Expect = 1e-52 Identities = 901/1399 (64%), Gaps = 41/1399 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG---ATTC 104277 ||| ||| ||||| ||||||| || || | || || ||||| |||| || | Sbjct 68348 CCCCCAGCACATGATCATGCGTGTTGCTGTTGGCGTT--TGGGGT-GACAATGTCGAGCG 68404 Query 104278 TGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| ||||||| ||| || ||||| |||| | | ||| ||| ||| | || || Sbjct 68405 TGTTCTGGAGACTTACAACCTCATGTCTAGCAAGTTCT--TCACTCATGCATCCCCCACT 68462 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 || |||||||||||||| || | || | || |||||||| | | || ||| Sbjct 68463 CTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCTTCGTGCTTCCTGGTTGACATGAAG 68522 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || ||| || | |||||||||| || | | | ||||| || || ||| | Sbjct 68523 GATGACAGCATTGAGGGTATCTATGATACCTTGAAGACTTGTGCTATGATTTCCAAGATG 68582 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 || || |||||||| | || | || | | | || | ||| || || Sbjct 68583 GCGGGTGGTATTGGCCTCAACGTTCACCGTATCCGTGCTACCGGCTCTTACATCGCTGGT 68642 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| || | ||||| |||| ||||| || || || ||| ||| || || Sbjct 68643 ACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCCCGT 68702 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 ||||| | || | ||| ||||| || || | || | ||||||||||| Sbjct 68703 TATGTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCTTTTGCTATTTATCTTGAGCCT 68759 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 ||||| || || | | |||||||| || | || || || || | ||||||| Sbjct 68760 TGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAGGTT 68819 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || ||| ||||| ||| ||||| ||||| || ||||| ||||||||| | ||||| Sbjct 68820 CGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATTGAG 68879 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 ||| ||| | ||| |||| | || || || || ||||| || | || | Sbjct 68880 AAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTAC 68939 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG--CGACTGCGA 104867 || || || || || || || ||| ||||| || | || ||||| | || || | Sbjct 68940 GGCGATGAATTCGAGGCTCTGTACGAGAAGTATGAAAAGGAGGGTCGTGGCCGTCTA--A 68997 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | | ||| | || | | ||| | || ||||| || | ||||||||||| || | Sbjct 68998 CCATTAAGGCT-CAGAAGCTCTGGTATGCCATTCTGGAGGCCCAAACCGAGACCGGAAAC 69056 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||| | ||||| ||| || |||| ||||| || || |||||| ||||| Sbjct 69057 CCCTTCATGTTGTACAAGGACCATTGCAACCGGAAGAGCAACCAGAAGAATCTGGGTACC 69116 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| || ||||| || || || || || | || | | | |||||| ||| Sbjct 69117 ATCCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTATTGTGCTCCTGATGAGGTTGCT 69176 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATT 105105 || || ||||| || || | ||||||||| || ||| || | || |||| ||| Sbjct 69177 GTTTGCAACCTTGCCTCCTTGGCTCTCCCCGCGTTTGTTGACTACACCAACAACT-CATA 69235 Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 || | | || || ||||| || || || ||| ||| | ||| | | || Sbjct 69236 CGACTTCCAGAAGCTGCACGAGGTCACCAAGGTTGTTGTTCGCAACTTGAACCGCATCAT 69295 Query 105166 TGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222 ||| || ||||||||| ||| || | | | | || ||| | |||||||| Sbjct 69296 TGACGTCAACCACTACCCCGTTCCCGAGGCT--TACAACAGC-AACATGCGCCACCGTCC 69352 Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTG 105281 |||||| | |||||||||||||| || |||| ||| | || || ||| | |||| Sbjct 69353 CATTGGTGTGGGTGTTCAGGGTCTTGCTGATGCCTTCCTAGCTCTG-CGCATGCCCTTTG 69411 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | || | ||||| || | || | | || ||||||||||| || |||||||||| Sbjct 69412 AGTCAGCTGAAGCTCGCCAATTGAACACTCAGATCTTTGAGACCATTTACCACGCCGCTC 69471 Query 105342 TTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 | |||||| || ||| | | | |||| ||| | || ||||| ||||| |||| Sbjct 69472 TGGAGGCGTCTTGCGAGATCTCTCAAATTGAGGGTACGTACTCAACCTACGAGGGCTCTC 69531 Query 105402 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC---T 105458 | | || || || | || || ||||||||||||| | || | || || | || | Sbjct 69532 CCGTCTCCCAGGGTATCCTCCAGTTTGATATGTGGG-ACGTCACCCCCAG--TGACCTTT 69588 Query 105459 ACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||| |||| ||||| | |||||| |||| ||| |||| ||| ||| ||| Sbjct 69589 GGGACTGGACTTCTCTTAAGGAGCAGATCAAGAAGAACGGTGTTCGCAACTCTCTTCTCC 69648 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | ||||| ||||| || ||| || | || || |||| || || || ||||| |||| Sbjct 69649 TTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTCTGGGCAACAACGAGTGCTTCGAAC 69708 Query 105579 CCTACACGACGAACATCTA 105597 | ||||| | |||||||| Sbjct 69709 CATACACCTCCAACATCTA 69727 >seq46 Length=146035 Score = 116 bits (128), Expect = 4e-21 Identities = 173/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 |||||| | ||||| | || |||| || |||| || || |||||||| ||||| Sbjct 142041 CTCTTTAACGCCATTGACACCATTCCCTGCATTCGCCGCAAGGCCGATTGGGCCCTGAAG 141982 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| ||| |||| | | |||||||| |||| ||| | || |||||| || || Sbjct 141981 TGGATTGCCGACAAGGAATCCA-CCTTTGCTCAGCGCCTCGTTGCTTTTGCGGCCGTCGA 141923 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| ||| |||| | | || | ||| | ||||| |||||||| Sbjct 141922 GGGTATCTTCTTCTCCGGTGCCTTTGCCTCCATCTTCTGGTTGCGCAAGCGTGGTCTCAT 141863 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| || || || ||||| ||||| || |||||||||||||| || ||| || || Sbjct 141862 GCCTGGCCTGACTTTTTCCAATGAGCTGATTTCTCGTGACGAGGGTCTTCACACCGACTT 141803 Query 94953 TGC 94955 ||| Sbjct 141802 TGC 141800 >seq95 Length=100549 Score = 107 bits (118), Expect = 2e-18 Identities = 172/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 168455 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 168514 ||||| |||||| ||||| | |||||| | ||||| ||||| ||| |||| | Sbjct 78922 GCATCGGAACCACCAGCAAGACGAGAACCAAAGTTACCACTGGGCTCCAGACAGTTGACA 78981 Query 168515 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCA 168574 ||||| ||||| | |||| | ||| | || |||||| | | || || ||||| Sbjct 78982 TTGTTGGAACCGACAAAGTCCTGCGCAAGACCGATAATCGTTTGCTGCAGGGAAGCTTCA 79041 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 168634 ||||| |||||||| | | | | ||| | | ||||||| | | || ||||| | Sbjct 79042 CCGTGTTGGTACGCGGTTTGACCCGAGACGTAACCAGCCAACTCCACAACCTTCAT---A 79098 Query 168635 TCCTTGAGATTCTTG---TGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGA 168691 ||||||| | | ||| | ||| || |||||||| || |||||||| |||||||||| Sbjct 79099 TCCTTGACAATGTTGCTCTTGAAACAGGCGTACATGACTTTGCGTTGACCAGGCTTGAGA 79158 Query 168692 CCATCC 168697 |||||| Sbjct 79159 CCATCC 79164 >seq260 Length=29797 Score = 98.7 bits (108), Expect = 1e-15 Identities = 213/316 (67%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 |||||||||||||||||||||| ||||| || ||| | || || | || ||| Sbjct 13887 GCATCAATCTCATCAATGAAGATAATGCACGGCGCATTCTTCCGCGCCGTAGCGAACAGA 13946 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9822 || || |||||| | || ||||||||||||||||| || || | || | || ||| Sbjct 13947 TCACGAACACGCGACGGTCCGACACCAACAAACATCTCTACGAACTCTGAACCAGACACA 14006 Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882 | || ||| || || ||| || || || | || ||| || | |||||||| || Sbjct 14007 CT-GAAGAATGGCACTCCAGACTCGCCAGCCGTCGCCTTGGCAAGCAACGTCTTACCGGT 14065 Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9942 ||| || |||| || | |||||| || ||||||||||| || | | | | | Sbjct 14066 ACCGGGGGGTCCCGAAAGAATGGCACCGCGAGGAATCTTGGCACCGAGACGCACGAACTT 14125 Query 9943 CTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 10002 ||| |||| |||||| || | |||| || | ||| | || || |||| || || Sbjct 14126 CTCGGGTTTCTTAAGGAACTGGACAAACTCCATAATCTCAACCTTAGCCTCGTCCATGCC 14185 Query 10003 CTCAACATCGGTAAAC 10018 | ||||||| |||| Sbjct 14186 GGCGACATCGGCAAAC 14201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256104750560