Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq13 163 9e-35 seq157 123 8e-23 seq3 114 4e-20 seq198 109 2e-18 seq51 98.7 3e-15 >seq13 Length=240985 Score = 163 bits (180), Expect = 9e-35 Identities = 177/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| |||||||| | | ||||| | || ||||| || || || ||||| || | Sbjct 38653 TTTACTGGCCACCACGGAGACGAAGAACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGT 38594 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| ||||| || |||||||||||||| || || ||||| | Sbjct 38593 AGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGT 38534 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || |||||||| || | || ||||| ||||| | |||||| | Sbjct 38533 CCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCAGAAG 38474 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||||| |||| |||||||| || || || || || ||||||||||| Sbjct 38473 ACTCAACTTCAAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 38419 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || ||||| || || || || || || ||||| Sbjct 38193 CATACCACCACGGAGACGAAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAATC 38134 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || |||||||| || || ||||| || || Sbjct 38133 GGAAAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGG 38074 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 38073 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTC 38014 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | |||| |||||||| || || || || || ||||||||||| Sbjct 38013 AACCTCCAAGGTAATGGTCTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 37963 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || || | ||| ||||| || || || || || || Sbjct 38421 CATACCACCACGGAGACGAAGAACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTC 38362 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| ||||| || || ||||| || || ||||| || ||||| || Sbjct 38361 AGAGAGAGTACGTCCATCCTCAAGCTGCTTACCAGCGAAAATGAGACGCTGTTGATCCGG 38302 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || || || ||||| | |||||| | || Sbjct 38301 GGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATGGTATCAGAAGACTC 38242 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | |||| ||||| || || || || || || || |||||||| Sbjct 38241 GACCTCCAAGGTAATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 38191 Score = 122 bits (134), Expect = 3e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || ||||| || || || Sbjct 37965 CATACCACCACGGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTC 37906 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || ||||||||||| || || || ||||| || || Sbjct 37905 GGACAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAATATCAGGCGCTGCTGGTCCGG 37846 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || | || || || || || | || || | || Sbjct 37845 AGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTC 37786 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || || || | ||||| ||||| Sbjct 37785 AACCTCGAGGGTGATGGTCTTGCCGGT 37759 >seq157 Length=65766 Score = 123 bits (136), Expect = 8e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || ||||| || || ||||| | || || ||||| || || || || ||||||||||| Sbjct 45138 TTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATC 45079 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| |||||||| || ||||| || || |||||||| || || | || ||||| || Sbjct 45078 AGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 45019 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | || || | ||||| || || |||| ||||| || || || || || || ||| Sbjct 45018 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTAACGAAA 44959 Query 140730 ATCTGCAT 140737 |||||||| Sbjct 44958 ATCTGCAT 44951 >seq3 Length=407529 Score = 114 bits (126), Expect = 4e-20 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || ||||| ||||| || || || || || ||| Sbjct 21595 ATACCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 21536 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || ||||| ||||| || || ||||| || || Sbjct 21535 GAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGG 21476 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || |||||||| || || | || || || || |||| || || | || Sbjct 21475 GGAATGCCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCG 21416 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| || || || || || || ||| |||||| Sbjct 21415 ACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA--CTGCAT 21368 >seq198 Length=47150 Score = 109 bits (120), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||| | | ||| || || ||||||||||| | ||| |||||||| |||| Sbjct 26120 ATGTAACCAGTCTCAGCAGTCTTGACAGCAGTATCAATAAGACCTTCACGACCAGCCATG 26061 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| |||||| | |||||||| |||| | |||| | |||| || || Sbjct 26060 GCGTGGAAGAAGAATTCACTGGGAGTAAGGCCACGCAGGTATGAGTTTTCAACGAACCCG 26001 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCA 378411 | | | ||||| | ||||| || || | || || | ||||| | || || || Sbjct 26000 CGGGACTCAGGCGAGTAATCATCCTTGGTGAAGTGGGGAAGAGTACGGTACTTGAAGCCG 25941 Query 378412 TATGGAATTCGTTTTCCATCAACATTCTGTTGACC 378446 | ||||| || || || |||||| |||||||||| Sbjct 25940 AAAGGAATACGCTTACCCTCAACAATCTGTTGACC 25906 Score = 91.5 bits (100), Expect = 4e-13 Identities = 111/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 377446 ATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAG 377505 ||||||| || || |||||||| | ||||| ||| ||| | |||||||||||| Sbjct 26930 ATTTCTTTAAGACGAGGCACACCGAGAGTAACGTTC---TTACTGGACACACCAGCAAAG 26874 Query 377506 TGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACG 377565 |||||||| || || || | ||||| | ||| |||||||| ||||| || || | || Sbjct 26873 TGGAAAGTGTTCAGTGTCATCTGAGTGGCGGGTTCACCAATGGACTGTGCAGCCAAGACA 26814 Query 377566 CCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || ||||| || || || |||| | ||||| Sbjct 26813 CCGACCATCTCACCGGGGTTGATGAAAGCCT 26783 >seq51 Length=140864 Score = 98.7 bits (108), Expect = 3e-15 Identities = 185/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||||| ||||| || ||||| || || || | |||||| || || || || | Sbjct 92676 GCTGTTATCACTGTTCCCGCCTACTTCAACGACTCTCAGCGTCAAGCCACCAAGGACTCC 92617 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || |||||||| || || ||| Sbjct 92616 GGTCTCATTGCCGGCCTTAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATT 92557 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||||| || | | || || || | || || || ||| | ||| Sbjct 92556 GCCTACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTTGGT 92497 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || | || || || || || || || || | Sbjct 92496 GGTGGTACTTTCGATGTTTCGCTTCTTACCATCGAGGACGGTATCTTCGAGGTCAAGTCC 92437 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGA 349881 || |||||||| || || | ||||| ||||| Sbjct 92436 ACCGCTGGTGACACTCACTTGGGTGGTGAAGA 92405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515241897257132