Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq116 203 4e-47
seq46 125 8e-24
seq95 114 1e-20
>seq116
Length=85249
Score = 203 bits (224), Expect = 4e-47
Identities = 366/530 (69%), Gaps = 10/530 (2%)
Strand=Plus/Plus
Query 53233 GCGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCC 53289
|||||| | ||||| ||| || | ||| ||| |||| ||| || || || | ||
Sbjct 68402 GCGTGTTCTGGAGACTTACAACCTCATGTCTAGC---AAGTTCTTCACTCATGCATCCCC 68458
Query 53290 AACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGAT 53349
|| |||||||| |||||||| || | ||| | || ||||||||||| | ||
Sbjct 68459 CACTCTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCTTCGTGCTTCCTGGTTGACAT 68518
Query 53350 GAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAA 53409
|||||||||| || || || ||||| || || | ||| ||||| || |||||
Sbjct 68519 GAAGGATGACAGCATTGAGGGTATCTATGATACCTTGAAGACTTGTGCTATGATTTCCAA 68578
Query 53410 GTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATC 53467
| | |||||||||| || || || | || | ||| |||||| | |||| | |||
Sbjct 68579 GATGGCGGGTGGTATTGGCCTCAAC-GTTC-ACCGTATCCGTGCTACCGGCTCTTACATC 68636
Query 53468 AAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACG 53527
|| || ||||| | | || ||||| || |||||||| ||||||||||||||
Sbjct 68637 GCTGGTACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACT 68696
Query 53528 GCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAG 53587
||||| || || |||||||||| ||||| || | || || || || || |||
Sbjct 68697 GCCCGTTATGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCTATTTATCTTGAG 68756
Query 53588 CCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAG 53647
|| ||||| || ||| | | ||||| ||||| || || |||||| || | || |||
Sbjct 68757 CCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAG 68816
Query 53648 ATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTG 53707
| ||| |||||| ||||| ||||||||||| || || || |||||| | |
Sbjct 68817 GTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATT 68876
Query 53708 GAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT 53757
|||||| | | || ||| ||||||||||| ||||||||||| |||||
Sbjct 68877 GAGAAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCT 68926
Score = 91.5 bits (100), Expect = 2e-13
Identities = 293/446 (66%), Gaps = 9/446 (2%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||| | || || ||||| ||||| || | ||||| ||||||||
Sbjct 69633 CGCAACTCTCTTCTCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTCTGGGCAAC 69692
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| ||||| || ||||| |||||||||||| |||||| ||| || ||||||
Sbjct 69693 AACGAGTGCTTCGAACCATACACCTCCAACATCTACCAGCGCCGTGTCCTGGCTGGTGAG 69752
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| | | ||| | | || || ||| | | | ||||
Sbjct 69753 TTCCAGGTTGTTAACCCGTGGTTGCTCCGCGATCTGGTCGACCTTGGCCTGTGGTCTGAT 69812
Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAG-ATTC 55718
| || |||| || || | ||| | || || ||| | || | ||| || ||||
Sbjct 69813 AACATGAAGAACCGTATCAT-TGCCG-ACAACGGTTCCATTCAAAACATCCCCAGTATTC 69870
Query 55719 CT-CTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777
|| ||| | |||||| | ||| ||| |||||||| ||| | ||| | | ||
Sbjct 69871 CTGCTG-ATATCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCGTACCGTTGTT 69929
Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837
| ||| ||| ||||||||||| | |||||| || || ||||| || || ||| ||||
Sbjct 69930 CAGATGGCTGCCGATCGTGGTGCTTTCATCGATCAATCTCAGTCCCTTAATATCCACATG 69989
Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897
|| | || | ||| |||| | | | |||||||| |||||||||| ||| ||
Sbjct 69990 AAGGACCCCACCATGGGCAAGATTACCAGCATGCACTTCACCGGGTGGAAGCTGGGTCTT 70049
Query 55898 AAGACGGGTATGTACTATCTGCGGAC 55923
||||| || ||||| ||||| || ||
Sbjct 70050 AAGACCGGCATGTATTATCTCCGTAC 70075
>seq46
Length=146035
Score = 125 bits (138), Expect = 8e-24
Identities = 568/882 (64%), Gaps = 44/882 (5%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|||||||| || ||||| || || ||||||||||| || | | ||| |||||||||||
Sbjct 141512 TAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATG 141571
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579
||||||| ||||| || ||| | |||||| |||| | || | |||
Sbjct 141572 AAGTCGAAGGGGTTGGAAGCCTTGTAGAC---CTTCTCGTTACCAA---GGGCAACGAGA 141625
Query 74580 CGA---TCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGT 74636
|| || || || || | |||||| | |||| | || | ||| |||| ||
Sbjct 141626 AGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGG 141685
Query 74637 TTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--A 74694
|| ||||| |||||||| | ||||| |||| | || ||| || || | |
Sbjct 141686 GCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGC--ATCGGTGATGA 141743
Query 74695 TCTTGTGAATGTCTT---TGGAAGGGCACTTTTCCCTCAGGTGAGAGTA-AAGCGTCACG 74750
| | || || || || ||||| || | | ||||||||||| ||| | || |
Sbjct 141744 TTTCCTGGATCAGTTGCTTGCTAGGGCGGTTGT---TGAGGTGAGAGTACAAGAGGCA-G 141799
Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808
||||| || | || || || || || | |||| ||||| ||||| | ||||
Sbjct 141800 GCAAAGTC--GGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGC 141857
Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868
||||||| || |||||||| |||||| ||||||| |||| ||| ||||||||
Sbjct 141858 CAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGA 141917
Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC---- 74924
| || ||||| |||||| || || ||||| || || || |||| || |||
Sbjct 141918 TACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGC-AAAGGTGGATTCCTTGTCGGCA 141976
Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTG 74983
||||| || | ||||| || || || || || |||||| | || || || || |
Sbjct 141977 ATCCACTTCAGGGCCCAATCGGCCTTGCG-GCGAATGCAGGGAATGGTGTCAATGGCGTT 142035
Query 74984 GAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGT 75043
||||| | || |||| ||||||| | | ||||||| || ||||| ||
Sbjct 142036 AAAGAGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGT 142095
Query 75044 CTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAAT 75103
||| || ||||| ||| | | |||| | ||||||| | || ||||| | ||
Sbjct 142096 CTCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAAC 142155
Query 75104 CTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163
||| || || ||||| | | | ||||| | || ||||| || || || ||
Sbjct 142156 CTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGC 142215
Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATC---GTCAGTGAGTTTGTCCCA 75220
|| ||||| || | ||||||| ||||||| || || | |||| |||
Sbjct 142216 AAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCA 142275
Query 75221 ATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCCAATC-GC 75277
|| | || ||| | || |||||||||||| | |||||||| | || || ||
Sbjct 142276 GTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCC---TCGGC 142332
Query 75278 CTTTTTGTACAAAGACCACAAGTCAGGGTAATTGATTGGAAA 75319
||| ||||||| ||| | ||| |||| ||||| || ||
Sbjct 142333 CTTCTTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAA 142374
>seq95
Length=100549
Score = 114 bits (126), Expect = 1e-20
Identities = 195/281 (69%), Gaps = 4/281 (1%)
Strand=Plus/Plus
Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352
|||| || |||||| || ||||||| |||||||| ||||||||||||||
Sbjct 78886 GGTGACAGACGAGTGTGGATATAACGAGCTGAGGCAGCATCGGAACCACCAGCAAGACGA 78945
Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412
| ||| || | ||||| ||||||| ||| | ||||||| || ||||||| ||
Sbjct 78946 GAACCAAAGTTACCACTGGGCTCCAGACAGTTGACATTGTTGGAACCGACAAAGTCCTGC 79005
Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472
|| | || |||||| || ||| || ||||| || || ||||| || || ||
Sbjct 79006 GCAAGACCGATAATCGTTTGCTGCAGGGAAGCTTCACCGTGTTGGTACGCGGTTTGACCC 79065
Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGC 117530
| ||||| || |||| || | |||||||| || |||| | ||| |||||| |
Sbjct 79066 GAGACGTAACCAGCCAACTCCACAACCTTCATATCCTTGAC--AATGTTGCTCTTGAAAC 79123
Query 117531 AGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571
|||| || || || ||||| |||| ||||| |||||||||
Sbjct 79124 AGGCGTACATGACTTTGCGTTGACCAGGCTTGAGACCATCC 79164
Score = 102 bits (112), Expect = 9e-17
Identities = 178/257 (69%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 152022 CAAACGCGTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACCTGCCAGCCGCGTT 152079
|| ||| ||| ||| || || ||||| || ||||| ||||| || || || |
Sbjct 78891 CAGACGAGTGTGGATATAACG--AGCTGAGGCAGCATCGGAACCACCAGCAAGACGAGAA 78948
Query 152080 CCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCC 152139
||||| | ||| |||||| || ||||| ||||||| || || || | ||| ||
Sbjct 78949 CCAAAGTTACCACTGGGCTCCAGACAGTTGACATTGTTGGAACCGACAAAGTCCTGCGCA 79008
Query 152140 AAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCG 152199
| | | |||||| |||||| ||||||||||| || ||||| || || ||| |
Sbjct 79009 AGACCGATAATCGTTTGCTGCAGGGAAGCTTCACCGTGTTGGTACGCGGTTTGACCCGAG 79068
Query 152200 ATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCG 152259
| ||| || ||||||| | | |||||||| ||| | | ||| |||||| |||||||
Sbjct 79069 ACGTAACCAGCCAACTCCACAACCTTCATATCCTTGACAATGTTGCTCTTGAAACAGGCG 79128
Query 152260 TAAATCACCTTGCGCTG 152276
|| || || ||||| ||
Sbjct 79129 TACATGACTTTGCGTTG 79145
Score = 100 bits (110), Expect = 3e-16
Identities = 223/331 (67%), Gaps = 4/331 (1%)
Strand=Plus/Plus
Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072
|| ||||||||||| ||||| || ||||| ||||| ||||||||||||| | || ||
Sbjct 79654 AGACCCTTGATATGTGAACCATCATGATCCTGATCGGCCATGATCATCAGGTGACCATAA 79713
Query 118073 CGTAAATCTCTCAGGG--AGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAA 118130
|| | | |||| | ||| ||||||| | ||| | ||| || |||| || || |
Sbjct 79714 CGGAGA-CTCTTGGTATCAGT-ATAAACCGTCTTATGCTTGAGACCCAGGAACTGCTTGA 79771
Query 118131 GGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCG 118190
|| | ||||| || | || | ||| | | | || || || |||||| ||
Sbjct 79772 TATTCTGGATTTCCTGGTTCTTGGTAATCTGATCAAGCGACGCATCACGGACGTTGAGCA 79831
Query 118191 GCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAA 118250
|||||| || || || || || || | ||| || ||| || | ||| ||||
Sbjct 79832 TCTTACCACGAAGCGGGAATACACCGATGCGGTCTGGGTCCAGAATGGCACGGCCAGCAA 79891
Query 118251 TAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGAT 118310
||| | | ||| ||||||||||| || || | |||||| ||||||||| || ||
Sbjct 79892 CAGCCAAAGACTTGGCCGAGTCACCTTCCGTCAGAATAAGCGTGCACTCGTGGCCACGGC 79951
Query 118311 GAGTACCGGCCCAATTAGCATCATCCAGCTT 118341
| | ||| ||| | ||||| ||| | |||||
Sbjct 79952 GGGAACCAGCCAAGTTAGCGTCAACAAGCTT 79982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547211594911200
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