Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq116 203 4e-47 seq46 125 8e-24 seq95 114 1e-20 >seq116 Length=85249 Score = 203 bits (224), Expect = 4e-47 Identities = 366/530 (69%), Gaps = 10/530 (2%) Strand=Plus/Plus Query 53233 GCGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCC 53289 |||||| | ||||| ||| || | ||| ||| |||| ||| || || || | || Sbjct 68402 GCGTGTTCTGGAGACTTACAACCTCATGTCTAGC---AAGTTCTTCACTCATGCATCCCC 68458 Query 53290 AACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGAT 53349 || |||||||| |||||||| || | ||| | || ||||||||||| | || Sbjct 68459 CACTCTGTTCAATGCTGGTACTCCCCAGGCGCAGCTCTCTTCGTGCTTCCTGGTTGACAT 68518 Query 53350 GAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAA 53409 |||||||||| || || || ||||| || || | ||| ||||| || ||||| Sbjct 68519 GAAGGATGACAGCATTGAGGGTATCTATGATACCTTGAAGACTTGTGCTATGATTTCCAA 68578 Query 53410 GTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATC 53467 | | |||||||||| || || || | || | ||| |||||| | |||| | ||| Sbjct 68579 GATGGCGGGTGGTATTGGCCTCAAC-GTTC-ACCGTATCCGTGCTACCGGCTCTTACATC 68636 Query 53468 AAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACG 53527 || || ||||| | | || ||||| || |||||||| |||||||||||||| Sbjct 68637 GCTGGTACCAACGGTACTTCTAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACT 68696 Query 53528 GCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAG 53587 ||||| || || |||||||||| ||||| || | || || || || || ||| Sbjct 68697 GCCCGTTATGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCTATTTATCTTGAG 68756 Query 53588 CCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAG 53647 || ||||| || ||| | | ||||| ||||| || || |||||| || | || ||| Sbjct 68757 CCTTGGCATGCAGACGTATTTGAGTTCCTCGATCTCCGCAAGAATCACGGCAAGGAGGAG 68816 Query 53648 ATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTG 53707 | ||| |||||| ||||| ||||||||||| || || || |||||| | | Sbjct 68817 GTTCGCGCCCGTGATCTGTTCCTTGCTCTGTGGATCCCTGATCTGTTCATGAAGCGTATT 68876 Query 53708 GAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT 53757 |||||| | | || ||| ||||||||||| ||||||||||| ||||| Sbjct 68877 GAGAAGAATGGTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCT 68926 Score = 91.5 bits (100), Expect = 2e-13 Identities = 293/446 (66%), Gaps = 9/446 (2%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| || ||| | || || ||||| ||||| || | ||||| |||||||| Sbjct 69633 CGCAACTCTCTTCTCCTTGCTCCCATGCCGACCGCCAGTACTTCGCAGATTCTGGGCAAC 69692 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| ||||| || ||||| |||||||||||| |||||| ||| || |||||| Sbjct 69693 AACGAGTGCTTCGAACCATACACCTCCAACATCTACCAGCGCCGTGTCCTGGCTGGTGAG 69752 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || | | ||| | | || || ||| | | | |||| Sbjct 69753 TTCCAGGTTGTTAACCCGTGGTTGCTCCGCGATCTGGTCGACCTTGGCCTGTGGTCTGAT 69812 Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAG-ATTC 55718 | || |||| || || | ||| | || || ||| | || | ||| || |||| Sbjct 69813 AACATGAAGAACCGTATCAT-TGCCG-ACAACGGTTCCATTCAAAACATCCCCAGTATTC 69870 Query 55719 CT-CTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777 || ||| | |||||| | ||| ||| |||||||| ||| | ||| | | || Sbjct 69871 CTGCTG-ATATCAAGGCTCTGTACAAGACTGTGTGGGAAATTTCTCAGCGTACCGTTGTT 69929 Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837 | ||| ||| ||||||||||| | |||||| || || ||||| || || ||| |||| Sbjct 69930 CAGATGGCTGCCGATCGTGGTGCTTTCATCGATCAATCTCAGTCCCTTAATATCCACATG 69989 Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897 || | || | ||| |||| | | | |||||||| |||||||||| ||| || Sbjct 69990 AAGGACCCCACCATGGGCAAGATTACCAGCATGCACTTCACCGGGTGGAAGCTGGGTCTT 70049 Query 55898 AAGACGGGTATGTACTATCTGCGGAC 55923 ||||| || ||||| ||||| || || Sbjct 70050 AAGACCGGCATGTATTATCTCCGTAC 70075 >seq46 Length=146035 Score = 125 bits (138), Expect = 8e-24 Identities = 568/882 (64%), Gaps = 44/882 (5%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 |||||||| || ||||| || || ||||||||||| || | | ||| ||||||||||| Sbjct 141512 TAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGCGAAATGTTCTCCATG 141571 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579 ||||||| ||||| || ||| | |||||| |||| | || | ||| Sbjct 141572 AAGTCGAAGGGGTTGGAAGCCTTGTAGAC---CTTCTCGTTACCAA---GGGCAACGAGA 141625 Query 74580 CGA---TCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGT 74636 || || || || || | |||||| | |||| | || | ||| |||| || Sbjct 141626 AGACGGTCGGCAACGAACTCGATGTACGTCTTCATGAGGTCAGCGTTCATACCGAGAAGG 141685 Query 74637 TTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--A 74694 || ||||| |||||||| | ||||| |||| | || ||| || || | | Sbjct 141686 GCACAGGGCAGGGCCTCGGTAAGGAACTCCTTCTCAATAGCGACAGC--ATCGGTGATGA 141743 Query 74695 TCTTGTGAATGTCTT---TGGAAGGGCACTTTTCCCTCAGGTGAGAGTA-AAGCGTCACG 74750 | | || || || || ||||| || | | ||||||||||| ||| | || | Sbjct 141744 TTTCCTGGATCAGTTGCTTGCTAGGGCGGTTGT---TGAGGTGAGAGTACAAGAGGCA-G 141799 Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808 ||||| || | || || || || || | |||| ||||| ||||| | |||| Sbjct 141800 GCAAAGTC--GGTGTGAAGACCCTCGTCACGAGAAATCAGCTCATTGGAAAAAGTCAGGC 141857 Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868 ||||||| || |||||||| |||||| ||||||| |||| ||| |||||||| Sbjct 141858 CAGGCATGAGACCACGCTTGCGCAACCAGAAGATGGAGGCAAAGGCACCGGAGAAGAAGA 141917 Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC---- 74924 | || ||||| |||||| || || ||||| || || || |||| || ||| Sbjct 141918 TACCCTCGACGGCCGCAAAAGCAACGAGGCGCTGAGC-AAAGGTGGATTCCTTGTCGGCA 141976 Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTG 74983 ||||| || | ||||| || || || || || |||||| | || || || || | Sbjct 141977 ATCCACTTCAGGGCCCAATCGGCCTTGCG-GCGAATGCAGGGAATGGTGTCAATGGCGTT 142035 Query 74984 GAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGT 75043 ||||| | || |||| ||||||| | | ||||||| || ||||| || Sbjct 142036 AAAGAGATAAGTGCGCTGGGCGGGCTCCTTGATGTAAGTATCAATCAGCAGGGAGTAGGT 142095 Query 75044 CTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAAT 75103 ||| || ||||| ||| | | |||| | ||||||| | || ||||| | || Sbjct 142096 CTCAGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGAAC 142155 Query 75104 CTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163 ||| || || ||||| | | | ||||| | || ||||| || || || || Sbjct 142156 CTGAACCTCAGCGGAAAAGCGCTCAACAAGGTTCTCGTTCACAATGCCATCAGAAGCAGC 142215 Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATC---GTCAGTGAGTTTGTCCCA 75220 || ||||| || | ||||||| ||||||| || || | |||| ||| Sbjct 142216 AAAGAAAGCGAGAATGTGAGAGATAAAGAACTGCTCATCCTTGTTCATGCGGTTGTTCCA 142275 Query 75221 ATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCCAATC-GC 75277 || | || ||| | || |||||||||||| | |||||||| | || || || Sbjct 142276 GTCGTGAAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAACGAAGCC---TCGGC 142332 Query 75278 CTTTTTGTACAAAGACCACAAGTCAGGGTAATTGATTGGAAA 75319 ||| ||||||| ||| | ||| |||| ||||| || || Sbjct 142333 CTTCTTGTACATCTGCCAAATCTCATGGTACTTGATGGGGAA 142374 >seq95 Length=100549 Score = 114 bits (126), Expect = 1e-20 Identities = 195/281 (69%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352 |||| || |||||| || ||||||| |||||||| |||||||||||||| Sbjct 78886 GGTGACAGACGAGTGTGGATATAACGAGCTGAGGCAGCATCGGAACCACCAGCAAGACGA 78945 Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412 | ||| || | ||||| ||||||| ||| | ||||||| || ||||||| || Sbjct 78946 GAACCAAAGTTACCACTGGGCTCCAGACAGTTGACATTGTTGGAACCGACAAAGTCCTGC 79005 Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472 || | || |||||| || ||| || ||||| || || ||||| || || || Sbjct 79006 GCAAGACCGATAATCGTTTGCTGCAGGGAAGCTTCACCGTGTTGGTACGCGGTTTGACCC 79065 Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGC 117530 | ||||| || |||| || | |||||||| || |||| | ||| |||||| | Sbjct 79066 GAGACGTAACCAGCCAACTCCACAACCTTCATATCCTTGAC--AATGTTGCTCTTGAAAC 79123 Query 117531 AGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 |||| || || || ||||| |||| ||||| ||||||||| Sbjct 79124 AGGCGTACATGACTTTGCGTTGACCAGGCTTGAGACCATCC 79164 Score = 102 bits (112), Expect = 9e-17 Identities = 178/257 (69%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 152022 CAAACGCGTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACCTGCCAGCCGCGTT 152079 || ||| ||| ||| || || ||||| || ||||| ||||| || || || | Sbjct 78891 CAGACGAGTGTGGATATAACG--AGCTGAGGCAGCATCGGAACCACCAGCAAGACGAGAA 78948 Query 152080 CCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCC 152139 ||||| | ||| |||||| || ||||| ||||||| || || || | ||| || Sbjct 78949 CCAAAGTTACCACTGGGCTCCAGACAGTTGACATTGTTGGAACCGACAAAGTCCTGCGCA 79008 Query 152140 AAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCG 152199 | | | |||||| |||||| ||||||||||| || ||||| || || ||| | Sbjct 79009 AGACCGATAATCGTTTGCTGCAGGGAAGCTTCACCGTGTTGGTACGCGGTTTGACCCGAG 79068 Query 152200 ATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCG 152259 | ||| || ||||||| | | |||||||| ||| | | ||| |||||| ||||||| Sbjct 79069 ACGTAACCAGCCAACTCCACAACCTTCATATCCTTGACAATGTTGCTCTTGAAACAGGCG 79128 Query 152260 TAAATCACCTTGCGCTG 152276 || || || ||||| || Sbjct 79129 TACATGACTTTGCGTTG 79145 Score = 100 bits (110), Expect = 3e-16 Identities = 223/331 (67%), Gaps = 4/331 (1%) Strand=Plus/Plus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || ||||||||||| ||||| || ||||| ||||| ||||||||||||| | || || Sbjct 79654 AGACCCTTGATATGTGAACCATCATGATCCTGATCGGCCATGATCATCAGGTGACCATAA 79713 Query 118073 CGTAAATCTCTCAGGG--AGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAA 118130 || | | |||| | ||| ||||||| | ||| | ||| || |||| || || | Sbjct 79714 CGGAGA-CTCTTGGTATCAGT-ATAAACCGTCTTATGCTTGAGACCCAGGAACTGCTTGA 79771 Query 118131 GGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCG 118190 || | ||||| || | || | ||| | | | || || || |||||| || Sbjct 79772 TATTCTGGATTTCCTGGTTCTTGGTAATCTGATCAAGCGACGCATCACGGACGTTGAGCA 79831 Query 118191 GCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAA 118250 |||||| || || || || || || | ||| || ||| || | ||| |||| Sbjct 79832 TCTTACCACGAAGCGGGAATACACCGATGCGGTCTGGGTCCAGAATGGCACGGCCAGCAA 79891 Query 118251 TAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGAT 118310 ||| | | ||| ||||||||||| || || | |||||| ||||||||| || || Sbjct 79892 CAGCCAAAGACTTGGCCGAGTCACCTTCCGTCAGAATAAGCGTGCACTCGTGGCCACGGC 79951 Query 118311 GAGTACCGGCCCAATTAGCATCATCCAGCTT 118341 | | ||| ||| | ||||| ||| | ||||| Sbjct 79952 GGGAACCAGCCAAGTTAGCGTCAACAAGCTT 79982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211594911200