Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq116 286 4e-72
seq13 190 2e-43
seq3 141 1e-28
seq157 136 5e-27
seq95 113 5e-20
>seq116
Length=85249
Score = 286 bits (316), Expect = 4e-72
Identities = 1124/1750 (64%), Gaps = 61/1750 (3%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| || ||||| |||||||| ||||| || ||| |||||| ||| | ||||||
Sbjct 70075 GTACGGAGATAATACATGCCGGTCTTAAGACCCAGCTTCCACCCGGTGAAGTGCATGCTG 70016
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
| | ||| | | ||||||| || |||| ||| || || |||||||| ||| ||||
Sbjct 70015 GTAATCTTGCCCATGGTGGGGTCCTTCATGTGGATATTAAGGGACTGAGATTGATCGATG 69956
Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217
||||| |||||||| || ||||| | || || | || | ||||||||| || ||
Sbjct 69955 AAAGCACCACGATCGGCAGCCATCTGAACAACGGTACGCTGAGAAATTTCCCACACAGTC 69896
Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATG-TCCAGAT--TTTGCACACTGCCACCG 80271
|||| |||| | || | ||||| | ||| |||| | || ||||
Sbjct 69895 TTGTACAGAGCCTTGATA---TCAGCAGGAATACTGGGGATGTTTTGAA---TGGAACCG 69842
Query 80272 TCCTTTACAATTTGA---TTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCT 80328
| | |||| | || |||| | | | ||| | ||||| | | ||||||
Sbjct 69841 TTGTCGGCAATGATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCGACCAGATCG 69782
Query 80329 TTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGG 80388
| | | ||||| | ||||| || || ||| || ||| | || | |
Sbjct 69781 CGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATG 69722
Query 80389 TTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTC 80448
|| | ||||| || || || ||||||||| || || ||||| | || || || |||
Sbjct 69721 TTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTC 69662
Query 80449 GGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAA 80508
||||| || | | | || || || || | |||| ||||||||| | |||
Sbjct 69661 GGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGCTC------- 69609
Query 80509 TCTGACCAAAAATCAAC-CCCAACGCT--------GTGAC--CCCACATGTCGTGCTGCA 80557
|| | | || || | ||||| | | ||||| ||||||| || ||| |
Sbjct 69608 -CTTAAGAGAAGTCCAGTCCCAAAGGTCACTGGGGGTGACGTCCCACATATCAAACTGGA 69550
Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617
||| |||| || | ||||| ||| || | || ||||| ||||| | | | |
Sbjct 69549 GGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCTCAATTTGAGAGA 69490
Query 80618 GCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACAC 80677
||| || ||| || || || ||||| |||||| |||||||| ||||||
Sbjct 69489 TCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATT 69430
Query 80678 CGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCT 80737
||| || | | || || | || || || | ||| | ||||| || ||||
Sbjct 69429 GGCGAGCTTCAGCTGACTCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCT 69370
Query 80738 GAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGG 80796
|||| || | | || || ||||||||| |||| | | | | ||||| |||| |||
Sbjct 69369 GAACACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTG-TAAGCCTCGGGAACGGGG 69311
Query 80797 TAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGA 80856
|| ||| || |||| |||||||| |||||| ||||||| || || || ||
Sbjct 69310 TAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGC 69251
Query 80857 AGTTTCTGAAAGTCGAAT---TGGTTCCCCT--TCA-CAAATGCCGGAAGGCTCAGGGAC 80910
|| ||||| |||||| || | ||| | ||| |||| || || || || |||
Sbjct 69250 AGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAGAGCCAAGGAG 69191
Query 80911 GCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAA 80970
|| || ||||| || || ||||| |||| | | | |||||| || || |||||||
Sbjct 69190 GCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATACTCGATAATCTCAGTGCACAGG 69131
Query 80971 TTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTG 81030
|| || || |||||||| || |||||||| ||| ||||||| |||||||
Sbjct 69130 TTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTG 69071
Query 81031 TAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCG 81090
|| ||||| | ||| | ||||||||| || | || || ||||| | ||| | ||
Sbjct 69070 TACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAATGGCATACCAGAGCTTC 69011
Query 81091 CGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCG 81150
| ||||| | ||| || || ||||||| |||| | |||
Sbjct 69010 TGAGCCTTAATGGTTAGACGGCCACGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCG 68951
Query 81151 AACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCA 81209
|| | | |||| | ||| ||| ||| | ||||||||||| ||||||||||| |||
Sbjct 68950 AATTCATCGCCGTAGCAGT-CAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCA 68892
Query 81210 GTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAG 81269
||| | ||||| | | ||||||||| ||||||||||| || || ||||||
Sbjct 68891 GTCACCATTCTTCTCAATACGCTTCATGAACAGATCAGGGATCCACAGAGCAAGGAACAG 68832
Query 81270 GTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGAT 81329
|| ||| ||| ||||||| | || || || ||| | ||||| || || | |
Sbjct 68831 ATCACGGGCGCGAACCTCCTCCTTGCCGTGATTCTTGCGGAGATCGAGGAACTCAAATAC 68772
Query 81330 GTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GCCACC 81383
||| |||||||| ||||| ||||| | || | | || | |||| ||||||
Sbjct 68771 GTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACC---GGGACGCTTGTTGCCACC 68715
Query 81384 CTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGA 81443
||||| || ||||||||||| ||| || ||||| | ||| || | |||||| | ||
Sbjct 68714 CTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGA 68655
Query 81444 CTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTGATTGAAAGA 81501
|||||| ||||| |||| || || | || || || || ||| ||
Sbjct 68654 AGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACGGTGAACGTTG--AGG 68597
Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561
|| || ||||| | | ||| |||||| |||||| |||| ||| ||||| || |||
Sbjct 68596 CCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGTATCATAGATACCC 68537
Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621
|| ||||| || | |||||||||| || ||| || || | || | || | |||
Sbjct 68536 TCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCT--GCGCCTGGGGAG 68479
Query 81622 --CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCAT 81679
|| ||||||||||| || |||| || ||| |||| | | | ||||| |||| |
Sbjct 68478 TACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTGCTAGACATGAGGTTGT 68419
Query 81680 AGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACA 81739
| || ||| || || | || |||||| || || | ||| |||||||| | ||
Sbjct 68418 AAGTCTCCAGAACACGCTCGACATTGTCACCCCAAACGCCAACAGCAACACGCATGATCA 68359
Query 81740 TGTACTGGGG 81749
||| ||||||
Sbjct 68358 TGTGCTGGGG 68349
>seq13
Length=240985
Score = 190 bits (210), Expect = 2e-43
Identities = 180/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| ||||||||||| |||||||| |
Sbjct 38419 ATGCAGATTTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTTGAAGTTGAGTCTTCT 38478
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | ||| | || ||||||||||||||||| ||||| || ||||||
Sbjct 38479 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 38538
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || ||||||| ||| || || | ||||| ||
Sbjct 38539 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAAC 38598
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || |||||||||||||| || | || | ||||| || ||||| ||
Sbjct 38599 ATTCAGAAGGAATCCACTCTCCACTTGGTTCTTCGTCTCCGTGGTGGCCA 38648
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || || ||||||||||| | ||||| ||||| |
Sbjct 38191 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACTATTACCTTGGAGGTCGAGTCTTCT 38250
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || ||||| | || ||||||||||||||||| ||||| || || ||
Sbjct 38251 GATACCATTGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 38310
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||| ||||||||||| || ||||||| ||||| || | ||||| ||
Sbjct 38311 CAGCGTCTCATTTTCGCTGGTAAGCAGCTTGAGGATGGACGTACTCTCTCTGACTACAAC 38370
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||| | || || || | ||||| || |||||
Sbjct 38371 ATCCAGAAGGAGTCCACTTTGCACCTGGTTCTTCGTCTCCGTGGTGG 38417
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| ||||| | |||||||||||
Sbjct 37963 ATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATTACCTTGGAGGTTGAGTCTTCC 38022
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || || |||||||||||||| |||||||| ||||||
Sbjct 38023 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 38082
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || ||||||| |||||||| | || || ||
Sbjct 38083 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCCGATTACAAC 38142
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||||||||| || || ||| | ||||| || |||||
Sbjct 38143 ATCCAGAAGGAATCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGG 38189
Score = 154 bits (170), Expect = 2e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || || ||||||||||| || | || | || | ||| |
Sbjct 37759 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAACGTCAAGTCC 37818
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| |||||||| ||||||||||| || || |||||||| |||
Sbjct 37819 AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTGATATTTGCTGGAAAG 37878
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| ||| || || | ||||| || | || ||||| |||||||| ||
Sbjct 37879 CAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCCACTCTCCAC 37938
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||| || |||||
Sbjct 37939 CTGGTCCTCCGTCTCCGTGGTGG 37961
>seq3
Length=407529
Score = 141 bits (156), Expect = 1e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || ||||| ||||| || | ||
Sbjct 21375 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 21434
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || ||||| |||||||| ||||| || ||||||||||| ||
Sbjct 21435 GACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 21494
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||| ||||| |||||||||| || || || | ||||| || |||| |||
Sbjct 21495 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCTGACTACAACATCCAGAAG 21554
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||||||| || || ||| | || || || |||||
Sbjct 21555 GAGTCCACTCTCCACCTGGTCCTCCGCCTCCGTGGTGG 21592
>seq157
Length=65766
Score = 136 bits (150), Expect = 5e-27
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| ||||| || ||||| ||||| || |||||||||||
Sbjct 44951 ATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 45010
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || ||||| |||||||| ||||| || || |||
Sbjct 45011 GACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAG 45070
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 45071 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTACAAC 45130
Query 27586 GTCCAAAAGG 27595
| || ||||
Sbjct 45131 ATTCAGAAGG 45140
>seq95
Length=100549
Score = 113 bits (124), Expect = 5e-20
Identities = 197/282 (70%), Gaps = 6/282 (2%)
Strand=Plus/Minus
Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GT 32041
||| || ||||||||| || ||||| || || |||||||| |||||| ||| | ||
Sbjct 79164 GGATGGTCTCAAGCCTGGTCAACGCAAAGTCATGTACGCCTGTTTCAAGAGCAACATTGT 79105
Query 32042 CGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACC 32101
| || || |||||||| | | || || | || ||||| | | ||||| || || || |
Sbjct 79104 CAAG-GATATGAAGGTTGTGGAGTTGGCTGGTTACGTCTCGGGTCAAACCGCGTACCAAC 79046
Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161
|||| || || || || ||| || ||| || ||||| ||| ||||||||||| | |
Sbjct 79045 ACGGTGAAGCTTCCCTGCAGCAAACGATTATCGGTCTTGCGCAGGACTTTGTCGGTTCCA 78986
Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221
| || | |||| || ||||| ||| | ||||| | || || || ||||| |
Sbjct 78985 ACAATGTCAACTGTCTGGAGCCCAGTGGTAACTTTGGTTCTCGTCTTGCTGGTGGTTCCG 78926
Query 32222 ATGCTGC--GAGCTCCCGTTACATCTTCACCCGTCTCGCACC 32261
||||||| |||| ||||| ||| ||| ||||| ||||
Sbjct 78925 ATGCTGCCTCAGCT--CGTTATATCCACACTCGTCTGTCACC 78886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570305809001280
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