Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq116 286 4e-72 seq13 190 2e-43 seq3 141 1e-28 seq157 136 5e-27 seq95 113 5e-20 >seq116 Length=85249 Score = 286 bits (316), Expect = 4e-72 Identities = 1124/1750 (64%), Gaps = 61/1750 (3%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || ||||| |||||||| ||||| || ||| |||||| ||| | |||||| Sbjct 70075 GTACGGAGATAATACATGCCGGTCTTAAGACCCAGCTTCCACCCGGTGAAGTGCATGCTG 70016 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 | | ||| | | ||||||| || |||| ||| || || |||||||| ||| |||| Sbjct 70015 GTAATCTTGCCCATGGTGGGGTCCTTCATGTGGATATTAAGGGACTGAGATTGATCGATG 69956 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217 ||||| |||||||| || ||||| | || || | || | ||||||||| || || Sbjct 69955 AAAGCACCACGATCGGCAGCCATCTGAACAACGGTACGCTGAGAAATTTCCCACACAGTC 69896 Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATG-TCCAGAT--TTTGCACACTGCCACCG 80271 |||| |||| | || | ||||| | ||| |||| | || |||| Sbjct 69895 TTGTACAGAGCCTTGATA---TCAGCAGGAATACTGGGGATGTTTTGAA---TGGAACCG 69842 Query 80272 TCCTTTACAATTTGA---TTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCT 80328 | | |||| | || |||| | | | ||| | ||||| | | |||||| Sbjct 69841 TTGTCGGCAATGATACGGTTCTTCATGTTATCAGACCACAGGCCAAGGTCGACCAGATCG 69782 Query 80329 TTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGG 80388 | | | ||||| | ||||| || || ||| || ||| | || | | Sbjct 69781 CGGAGCAACCACGGGTTAACAACCTGGAACTCACCAGCCAGGACACGGCGCTGGTAGATG 69722 Query 80389 TTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTC 80448 || | ||||| || || || ||||||||| || || ||||| | || || || ||| Sbjct 69721 TTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAAGTACTGGCGGTC 69662 Query 80449 GGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAA 80508 ||||| || | | | || || || || | |||| ||||||||| | ||| Sbjct 69661 GGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCGTTCTTCTTGATCTGCTC------- 69609 Query 80509 TCTGACCAAAAATCAAC-CCCAACGCT--------GTGAC--CCCACATGTCGTGCTGCA 80557 || | | || || | ||||| | | ||||| ||||||| || ||| | Sbjct 69608 -CTTAAGAGAAGTCCAGTCCCAAAGGTCACTGGGGGTGACGTCCCACATATCAAACTGGA 69550 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 ||| |||| || | ||||| ||| || | || ||||| ||||| | | | | Sbjct 69549 GGATACCCTGGGAGACGGGAGAGCCCTCGTAGGTTGAGTACGTACCCTCAATTTGAGAGA 69490 Query 80618 GCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACAC 80677 ||| || ||| || || || ||||| |||||| |||||||| |||||| Sbjct 69489 TCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGTCTCAAAGATCTGAGTGTTCAATT 69430 Query 80678 CGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCT 80737 ||| || | | || || | || || || | ||| | ||||| || |||| Sbjct 69429 GGCGAGCTTCAGCTGACTCAAAGGGCATGCGCAGAGCTAGGAAGGCATCAGCAAGACCCT 69370 Query 80738 GAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGG 80796 |||| || | | || || ||||||||| |||| | | | | ||||| |||| ||| Sbjct 69369 GAACACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTG-TAAGCCTCGGGAACGGGG 69311 Query 80797 TAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGA 80856 || ||| || |||| |||||||| |||||| ||||||| || || || || Sbjct 69310 TAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAACAACAACCTTGGTGACCTCGTGC 69251 Query 80857 AGTTTCTGAAAGTCGAAT---TGGTTCCCCT--TCA-CAAATGCCGGAAGGCTCAGGGAC 80910 || ||||| |||||| || | ||| | ||| |||| || || || || ||| Sbjct 69250 AGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCAACAAACGCGGGGAGAGCCAAGGAG 69191 Query 80911 GCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAA 80970 || || ||||| || || ||||| |||| | | | |||||| || || ||||||| Sbjct 69190 GCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATACTCGATAATCTCAGTGCACAGG 69131 Query 80971 TTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTG 81030 || || || |||||||| || |||||||| ||| ||||||| ||||||| Sbjct 69130 TTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCTCTTCCGGTTGCAATGGTCCTTG 69071 Query 81031 TAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCG 81090 || ||||| | ||| | ||||||||| || | || || ||||| | ||| | || Sbjct 69070 TACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTCCAGAATGGCATACCAGAGCTTC 69011 Query 81091 CGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCG 81150 | ||||| | ||| || || ||||||| |||| | ||| Sbjct 69010 TGAGCCTTAATGGTTAGACGGCCACGACCCTCCTTTTCATACTTCTCGTACAGAGCCTCG 68951 Query 81151 AACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCA 81209 || | | |||| | ||| ||| ||| | ||||||||||| ||||||||||| ||| Sbjct 68950 AATTCATCGCCGTAGCAGT-CAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCA 68892 Query 81210 GTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAG 81269 ||| | ||||| | | ||||||||| ||||||||||| || || |||||| Sbjct 68891 GTCACCATTCTTCTCAATACGCTTCATGAACAGATCAGGGATCCACAGAGCAAGGAACAG 68832 Query 81270 GTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGAT 81329 || ||| ||| ||||||| | || || || ||| | ||||| || || | | Sbjct 68831 ATCACGGGCGCGAACCTCCTCCTTGCCGTGATTCTTGCGGAGATCGAGGAACTCAAATAC 68772 Query 81330 GTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GCCACC 81383 ||| |||||||| ||||| ||||| | || | | || | |||| |||||| Sbjct 68771 GTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAGCACC---GGGACGCTTGTTGCCACC 68715 Query 81384 CTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGA 81443 ||||| || ||||||||||| ||| || ||||| | ||| || | |||||| | || Sbjct 68714 CTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTAGA 68655 Query 81444 CTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTGATTGAAAGA 81501 |||||| ||||| |||| || || | || || || || ||| || Sbjct 68654 AGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCACGGATACGGTGAACGTTG--AGG 68597 Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561 || || ||||| | | ||| |||||| |||||| |||| ||| ||||| || ||| Sbjct 68596 CCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCTTCAAGGTATCATAGATACCC 68537 Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621 || ||||| || | |||||||||| || ||| || || | || | || | ||| Sbjct 68536 TCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAGAGAGCT--GCGCCTGGGGAG 68479 Query 81622 --CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCAT 81679 || ||||||||||| || |||| || ||| |||| | | | ||||| |||| | Sbjct 68478 TACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAAGAACTTGCTAGACATGAGGTTGT 68419 Query 81680 AGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACA 81739 | || ||| || || | || |||||| || || | ||| |||||||| | || Sbjct 68418 AAGTCTCCAGAACACGCTCGACATTGTCACCCCAAACGCCAACAGCAACACGCATGATCA 68359 Query 81740 TGTACTGGGG 81749 ||| |||||| Sbjct 68358 TGTGCTGGGG 68349 >seq13 Length=240985 Score = 190 bits (210), Expect = 2e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| ||||||||||| |||||||| | Sbjct 38419 ATGCAGATTTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTTGAAGTTGAGTCTTCT 38478 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || ||||||||||||||||| ||||| || |||||| Sbjct 38479 GATACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 38538 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||| || ||||||| ||| || || | ||||| || Sbjct 38539 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAAC 38598 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || |||||||||||||| || | || | ||||| || ||||| || Sbjct 38599 ATTCAGAAGGAATCCACTCTCCACTTGGTTCTTCGTCTCCGTGGTGGCCA 38648 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||||||||| | ||||| ||||| | Sbjct 38191 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACTATTACCTTGGAGGTCGAGTCTTCT 38250 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || ||||| | || ||||||||||||||||| ||||| || || || Sbjct 38251 GATACCATTGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 38310 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| ||||||||||| || ||||||| ||||| || | ||||| || Sbjct 38311 CAGCGTCTCATTTTCGCTGGTAAGCAGCTTGAGGATGGACGTACTCTCTCTGACTACAAC 38370 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||| | || || || | ||||| || ||||| Sbjct 38371 ATCCAGAAGGAGTCCACTTTGCACCTGGTTCTTCGTCTCCGTGGTGG 38417 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| ||||| | ||||||||||| Sbjct 37963 ATGCAGATTTTCGTCAAGACTCTGACTGGAAAGACCATTACCTTGGAGGTTGAGTCTTCC 38022 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||| |||||||| |||||| Sbjct 38023 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 38082 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||||| |||||||| | || || || Sbjct 38083 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCCGATTACAAC 38142 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| || || ||| | ||||| || ||||| Sbjct 38143 ATCCAGAAGGAATCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGG 38189 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||||||||| || | || | || | ||| | Sbjct 37759 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAACGTCAAGTCC 37818 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| |||||||| ||||||||||| || || |||||||| ||| Sbjct 37819 AAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTGATATTTGCTGGAAAG 37878 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| ||| || || | ||||| || | || ||||| |||||||| || Sbjct 37879 CAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCCACTCTCCAC 37938 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 37939 CTGGTCCTCCGTCTCCGTGGTGG 37961 >seq3 Length=407529 Score = 141 bits (156), Expect = 1e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || ||||| ||||| || | || Sbjct 21375 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 21434 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || ||||| |||||||| ||||| || ||||||||||| || Sbjct 21435 GACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 21494 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||||| || || || | ||||| || |||| ||| Sbjct 21495 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCTGACTACAACATCCAGAAG 21554 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||||||| || || ||| | || || || ||||| Sbjct 21555 GAGTCCACTCTCCACCTGGTCCTCCGCCTCCGTGGTGG 21592 >seq157 Length=65766 Score = 136 bits (150), Expect = 5e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct 44951 ATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 45010 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || ||||| |||||||| ||||| || || ||| Sbjct 45011 GACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAG 45070 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 45071 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTACAAC 45130 Query 27586 GTCCAAAAGG 27595 | || |||| Sbjct 45131 ATTCAGAAGG 45140 >seq95 Length=100549 Score = 113 bits (124), Expect = 5e-20 Identities = 197/282 (70%), Gaps = 6/282 (2%) Strand=Plus/Minus Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GT 32041 ||| || ||||||||| || ||||| || || |||||||| |||||| ||| | || Sbjct 79164 GGATGGTCTCAAGCCTGGTCAACGCAAAGTCATGTACGCCTGTTTCAAGAGCAACATTGT 79105 Query 32042 CGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACC 32101 | || || |||||||| | | || || | || ||||| | | ||||| || || || | Sbjct 79104 CAAG-GATATGAAGGTTGTGGAGTTGGCTGGTTACGTCTCGGGTCAAACCGCGTACCAAC 79046 Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161 |||| || || || || ||| || ||| || ||||| ||| ||||||||||| | | Sbjct 79045 ACGGTGAAGCTTCCCTGCAGCAAACGATTATCGGTCTTGCGCAGGACTTTGTCGGTTCCA 78986 Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221 | || | |||| || ||||| ||| | ||||| | || || || ||||| | Sbjct 78985 ACAATGTCAACTGTCTGGAGCCCAGTGGTAACTTTGGTTCTCGTCTTGCTGGTGGTTCCG 78926 Query 32222 ATGCTGC--GAGCTCCCGTTACATCTTCACCCGTCTCGCACC 32261 ||||||| |||| ||||| ||| ||| ||||| |||| Sbjct 78925 ATGCTGCCTCAGCT--CGTTATATCCACACTCGTCTGTCACC 78886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305809001280