Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq64 98.7 9e-16 >seq64 Length=125035 Score = 98.7 bits (108), Expect = 9e-16 Identities = 166/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 |||||| || |||||||||||||| || ||||| ||||||||||| || || ||||| Sbjct 100765 CGGGAGATTGGTGACTTGGGCCCGGTTTATGGGTTTCAGTGGAGACATTTCGGAGCGGAA 100824 Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGC-TGCAGTACGTGA 34502 ||| | | |||||| | |||||| | || ||||| | || |||| ||||| | || | Sbjct 100825 TAT-GTTGATGCGAAGACAGACTATACAGGCCAGGGTGTCGATCAGCTTGCAG-AGGTCA 100882 Query 34503 TCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGA 34562 | | | |||||| ||||| ||||| | | ||| | ||| | || ||||||||| Sbjct 100883 TTTATAAGTTGAAGAACAACCCATATGACCGTCGAATCATCATGAGTGCTTGGAACCCGG 100942 Query 34563 AGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 ||| | |||||| | || ||||| |||| | |||||||||||| Sbjct 100943 CGGACTTGAAGAAGATGGCATTGCCGCCGTGTCACATGTTTGCCCAATTCTACGT 100997 Score = 98.7 bits (108), Expect = 9e-16 Identities = 166/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||||||| | |||| ||||| || | |||||| | ||| |||| Sbjct 100997 ACGTAGAATTGGGCAAACATGTGACACGGCGGCAATGCCATCTTCTTCAAGTCCGCCGGG 100938 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 ||||| || | ||| | ||| | | ||||| ||||| |||||| | | || || Sbjct 100937 TTCCAAGCACTCATGATGATTCGACGGTCATATGGGTTGTTCTTCAACTTATAAATGACC 100878 Query 6848 TACTGCA-GCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | ||||| |||| || | ||||| || | |||||| | |||||| | | ||| |||| Sbjct 100877 T-CTGCAAGCTGATCGACACCCTGGCCTGTATAGTCTGTCTTCGCATCAAC-ATATTCCG 100820 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960 | || || ||||||||||| ||||| || |||||||||||||| || |||||| Sbjct 100819 CTCCGAAATGTCTCCACTGAAACCCATAAACCGGGCCCAAGTCACCAATCTCCCG 100765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448258791487680