Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq64 98.7 9e-16
>seq64
Length=125035
Score = 98.7 bits (108), Expect = 9e-16
Identities = 166/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|||||| || |||||||||||||| || ||||| ||||||||||| || || |||||
Sbjct 100765 CGGGAGATTGGTGACTTGGGCCCGGTTTATGGGTTTCAGTGGAGACATTTCGGAGCGGAA 100824
Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGC-TGCAGTACGTGA 34502
||| | | |||||| | |||||| | || ||||| | || |||| ||||| | || |
Sbjct 100825 TAT-GTTGATGCGAAGACAGACTATACAGGCCAGGGTGTCGATCAGCTTGCAG-AGGTCA 100882
Query 34503 TCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGA 34562
| | | |||||| ||||| ||||| | | ||| | ||| | || |||||||||
Sbjct 100883 TTTATAAGTTGAAGAACAACCCATATGACCGTCGAATCATCATGAGTGCTTGGAACCCGG 100942
Query 34563 AGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617
||| | |||||| | || ||||| |||| | ||||||||||||
Sbjct 100943 CGGACTTGAAGAAGATGGCATTGCCGCCGTGTCACATGTTTGCCCAATTCTACGT 100997
Score = 98.7 bits (108), Expect = 9e-16
Identities = 166/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787
|||||||||||| | |||| ||||| || | |||||| | ||| ||||
Sbjct 100997 ACGTAGAATTGGGCAAACATGTGACACGGCGGCAATGCCATCTTCTTCAAGTCCGCCGGG 100938
Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847
||||| || | ||| | ||| | | ||||| ||||| |||||| | | || ||
Sbjct 100937 TTCCAAGCACTCATGATGATTCGACGGTCATATGGGTTGTTCTTCAACTTATAAATGACC 100878
Query 6848 TACTGCA-GCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905
| ||||| |||| || | ||||| || | |||||| | |||||| | | ||| ||||
Sbjct 100877 T-CTGCAAGCTGATCGACACCCTGGCCTGTATAGTCTGTCTTCGCATCAAC-ATATTCCG 100820
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960
| || || ||||||||||| ||||| || |||||||||||||| || ||||||
Sbjct 100819 CTCCGAAATGTCTCCACTGAAACCCATAAACCGGGCCCAAGTCACCAATCTCCCG 100765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448258791487680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |