Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq157 100 2e-16
seq13 98.7 7e-16
>seq157
Length=65766
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||||||||| ||||| ||||| || ||||| || ||||| ||||| |||
Sbjct 44948 AAGATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 45007
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| | || ||| | || | || || || || || || | || || ||
Sbjct 45008 TCGGACACCATCGACAATGTCAAGTC-CAAGATCCAGGATAAGGAGGGCATTCCCCCGGA 45066
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || ||||| ||||| || ||||| || | ||||| | || ||
Sbjct 45067 TCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTA 45126
Query 23787 CAACATACAAAA 23798
|||||| || ||
Sbjct 45127 CAACATTCAGAA 45138
>seq13
Length=240985
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| ||||| || || ||||| |||||||| || |
Sbjct 38419 ATGCAGATTTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTTGAAGTTGAGTCTTCT 38478
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | || ||| ||||| || || | || || || ||
Sbjct 38479 GATACCATTGACAATGTCAAGTC-CAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 38537
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||| || || || || || || | |||||| | ||| |||||
Sbjct 38538 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAA 38597
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || || ||||| | || || |||
Sbjct 38598 CATTCAGAAGGAATCCACTCTCCACTTGGTT 38628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338006947047152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |