Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09]
644 sequences; 28,339,215 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq116 232 9e-56
>seq116
Length=85249
Score = 232 bits (256), Expect = 9e-56
Identities = 1065/1675 (64%), Gaps = 31/1675 (2%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
||||||||||| |||| || || | || ||||| ||||| ||||| || || || |||
Sbjct 70105 GTAAACTGAATAGGAGCAGCAGCAGCTTGAGTACGGAGATAATACATGCCGGTCTTAAGA 70046
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
||||| |||| ||| ||| |||||||| || | ||| | || || ||
Sbjct 70045 CCCAGCTTCCACCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCCTTCATG 69986
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
|| ||||| | |||||| ||||||||||||||| || | ||| || ||||| | | |
Sbjct 69985 TGGATATTAAGGGACTGAGATTGATCGATGAAAGCACCACGATCGGCAGCCATCTGAACA 69926
Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021
| ||| |||| ||||||||| | ||| ||| | | ||||||||| | ||||
Sbjct 69925 ACGGTACGCTGAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATA 69866
Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078
| | | |||||||||||||| || | || || ||||| || | |||| |
Sbjct 69865 CTGGGGATGTTTTGAATGGAACCGTTGTCGGCAATGATACGGTTCTTCATGTTATCAGAC 69806
Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138
|||| || | | | | || | || ||||| | || || || |||
Sbjct 69805 CACAGGCCAAGGTCGACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCA 69746
Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198
| || || | || ||| || || ||| |||||||| | | || ||||| |||
Sbjct 69745 GCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCC 69686
Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258
| ||| || | |||| || || ||||| || || | | | | || | | |||
Sbjct 69685 AGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCG 69626
Query 77259 TGTGTTCT-GATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGAAGGTACAACA 77315
| | |||| ||| | || || ||| | |||| |||||||| || || ||| ||
Sbjct 69625 T-TCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCACTGGGGGTG--ACG 69569
Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATG----ATCCATTATATGTTTC 77371
||||| | ||| | || || || || || | | | | | || | || |||
Sbjct 69568 TCCCACATATCAAACTGGAGGATACC----CTGGGAGACGGGAGAGCCCTCGTAGGTTGA 69513
Query 77372 ATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431
|| | || || ||| || | || ||| ||| |||| || ||| ||||| ||
Sbjct 69512 GTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGT 69453
Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491
|| || |||| | || | | | |||||| ||||| || | | |
Sbjct 69452 CTCAAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAAGGGCATGCGCAGAGC 69393
Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551
| |||||||| || | |||||||| || | |||||| || | || | | | |||
Sbjct 69392 TAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTTGCT 69333
Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611
| | ||| || |||| || || | || | ||| || || || | || | |||
Sbjct 69332 GTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAAC 69273
Query 77612 AACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCT----TCCATCTAT--AAC 77665
||| || || || || | || || | || || || | | || |||
Sbjct 69272 AACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCAAC 69213
Query 77666 AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATA 77725
|||| | | ||| | || || || || ||||| || ||||||| || |||
Sbjct 69212 AAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATA 69153
Query 77726 TTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCT 77785
| || ||||| || || || || | ||| || |||||||| | ||||||||
Sbjct 69152 CTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCT 69093
Query 77786 CTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTC 77845
||| ||||| |||||| || | || || || | ||||| || | || | ||
Sbjct 69092 CTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTC 69033
Query 77846 GATAATAGATTTCCAGACGACTCT-AGCTTTTATCAT-AGATTTGTATCGCCTCTCTCTT 77903
| ||| | | ||||| | ||| ||| || || | ||| | || | ||| ||
Sbjct 69032 CAGAATGGCATACCAGA-GCTTCTGAGCCTTAATGGTTAGACGGCCA-CGACCCTCCTTT 68975
Query 77904 TCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961
||||| | ||| | |||| || |||||||| || | ||| ||| |||||||
Sbjct 68974 TCATACTTCTCGTACAGAGCC--TCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGC 68917
Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021
| || || |||||||||| | ||||||||||| | || || || ||||| || ||||
Sbjct 68916 ACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGAT 68857
Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081
|||| ||||| ||||||| || ||||| |||| | | || || || || |||||
Sbjct 68856 CAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATTCT 68797
Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141
| |||||||| ||||| | | || | |||||| || || ||||| || || | |
Sbjct 68796 TGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAG 68737
Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201
| || || || || || || ||||| || | ||| | ||| ||||| || | || | |
Sbjct 68736 CACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGA 68677
Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261
||| |||| ||||||||||| || || || || |||| || ||| || | || |
Sbjct 68676 GCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCAC 68617
Query 78262 GAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTT 78321
| ||| || | | || || || || |||||||| || || | ||| ||| |
Sbjct 68616 GGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCT 68557
Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381
|||| ||||| ||||||||||| || ||||||||| |||||| || || || || ||
Sbjct 68556 TCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAG 68497
Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436
| | || || ||| || ||||| || | || || |||||||| || ||
Sbjct 68496 AGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAA 68442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694663207916160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |