Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20adiposa_20[genbank_20GCA_5F001640685.1_202016-05-09] 644 sequences; 28,339,215 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq116 232 9e-56 >seq116 Length=85249 Score = 232 bits (256), Expect = 9e-56 Identities = 1065/1675 (64%), Gaps = 31/1675 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 ||||||||||| |||| || || | || ||||| ||||| ||||| || || || ||| Sbjct 70105 GTAAACTGAATAGGAGCAGCAGCAGCTTGAGTACGGAGATAATACATGCCGGTCTTAAGA 70046 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||||| |||| ||| ||| |||||||| || | ||| | || || || Sbjct 70045 CCCAGCTTCCACCCGGTGAAGTGCATGCTGGTAATCTTGCCCATGGTGGGGTCCTTCATG 69986 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||| | |||||| ||||||||||||||| || | ||| || ||||| | | | Sbjct 69985 TGGATATTAAGGGACTGAGATTGATCGATGAAAGCACCACGATCGGCAGCCATCTGAACA 69926 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | ||| |||| ||||||||| | ||| ||| | | ||||||||| | |||| Sbjct 69925 ACGGTACGCTGAGAAATTTCCCACACAGTCTTGTACAGAGCCTTGATATCAGCAGGAATA 69866 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 | | | |||||||||||||| || | || || ||||| || | |||| | Sbjct 69865 CTGGGGATGTTTTGAATGGAACCGTTGTCGGCAATGATACGGTTCTTCATGTTATCAGAC 69806 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 |||| || | | | | || | || ||||| | || || || ||| Sbjct 69805 CACAGGCCAAGGTCGACCAGATCGCGGAGCAACCACGGGTTAACAACCTGGAACTCACCA 69746 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | || || | || ||| || || ||| |||||||| | | || ||||| ||| Sbjct 69745 GCCAGGACACGGCGCTGGTAGATGTTGGAGGTGTATGGTTCGAAGCACTCGTTGTTGCCC 69686 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||| || | |||| || || ||||| || || | | | | || | | ||| Sbjct 69685 AGAATCTGCGAAGTACTGGCGGTCGGCATGGGAGCAAGGAGAAGAGAGTTGCGAACACCG 69626 Query 77259 TGTGTTCT-GATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGAAGGTACAACA 77315 | | |||| ||| | || || ||| | |||| |||||||| || || ||| || Sbjct 69625 T-TCTTCTTGATCTGCTCCTTAAGAGAAGTCCAGTCCCAAAGGTCACTGGGGGTG--ACG 69569 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATG----ATCCATTATATGTTTC 77371 ||||| | ||| | || || || || || | | | | | || | || ||| Sbjct 69568 TCCCACATATCAAACTGGAGGATACC----CTGGGAGACGGGAGAGCCCTCGTAGGTTGA 69513 Query 77372 ATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431 || | || || ||| || | || ||| ||| |||| || ||| ||||| || Sbjct 69512 GTACGTACCCTCAATTTGAGAGATCTCGCAAGACGCCTCCAGAGCGGCGTGGTAAATGGT 69453 Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 || || |||| | || | | | |||||| ||||| || | | | Sbjct 69452 CTCAAAGATCTGAGTGTTCAATTGGCGAGCTTCAGCTGACTCAAAGGGCATGCGCAGAGC 69393 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 | |||||||| || | |||||||| || | |||||| || | || | | | ||| Sbjct 69392 TAGGAAGGCATCAGCAAGACCCTGAACACCCACACCAATGGGACGGTGGCGCATGTTGCT 69333 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 | | ||| || |||| || || | || | ||| || || || | || | ||| Sbjct 69332 GTTGTAAGCCTCGGGAACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAAGTTGCGAAC 69273 Query 77612 AACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCT----TCCATCTAT--AAC 77665 ||| || || || || | || || | || || || | | || ||| Sbjct 69272 AACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTATGAGTTGTTGGTGTAGTCAAC 69213 Query 77666 AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATA 77725 |||| | | ||| | || || || || ||||| || ||||||| || ||| Sbjct 69212 AAACGCGGGGAGAGCCAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGAGCACAATA 69153 Query 77726 TTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCT 77785 | || ||||| || || || || | ||| || |||||||| | |||||||| Sbjct 69152 CTCGATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGATTCTTCTGGTTGCT 69093 Query 77786 CTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTC 77845 ||| ||||| |||||| || | || || || | ||||| || | || | || Sbjct 69092 CTTCCGGTTGCAATGGTCCTTGTACAACATGAAGGGGTTTCCGGTCTCGGTTTGGGCCTC 69033 Query 77846 GATAATAGATTTCCAGACGACTCT-AGCTTTTATCAT-AGATTTGTATCGCCTCTCTCTT 77903 | ||| | | ||||| | ||| ||| || || | ||| | || | ||| || Sbjct 69032 CAGAATGGCATACCAGA-GCTTCTGAGCCTTAATGGTTAGACGGCCA-CGACCCTCCTTT 68975 Query 77904 TCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 ||||| | ||| | |||| || |||||||| || | ||| ||| ||||||| Sbjct 68974 TCATACTTCTCGTACAGAGCC--TCGAATTCATCGCCGTAGCAGTCAGCCAGGCCAGGGC 68917 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 | || || |||||||||| | ||||||||||| | || || || ||||| || |||| Sbjct 68916 ACTCGTTGGGGCACATCAGAGTCCAGTCACCATTCTTCTCAATACGCTTCATGAACAGAT 68857 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||| ||||| ||||||| || ||||| |||| | | || || || || ||||| Sbjct 68856 CAGGGATCCACAGAGCAAGGAACAGATCACGGGCGCGAACCTCCTCCTTGCCGTGATTCT 68797 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 | |||||||| ||||| | | || | |||||| || || ||||| || || | | Sbjct 68796 TGCGGAGATCGAGGAACTCAAATACGTCTGCATGCCAAGGCTCAAGATAAATAGCAAAAG 68737 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 | || || || || || || ||||| || | ||| | ||| ||||| || | || | | Sbjct 68736 CACCGGGACGCTTGTTGCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGA 68677 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 ||| |||| ||||||||||| || || || || |||| || ||| || | || | Sbjct 68676 GCATGGGAACGATACCGTTAGAAGTACCGTTGGTACCAGCGATGTAAGAGCCGGTAGCAC 68617 Query 78262 GAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTT 78321 | ||| || | | || || || || |||||||| || || | ||| ||| | Sbjct 68616 GGATACGGTGAACGTTGAGGCCAATACCACCCGCCATCTTGGAAATCATAGCACAAGTCT 68557 Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381 |||| ||||| ||||||||||| || ||||||||| |||||| || || || || || Sbjct 68556 TCAAGGTATCATAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGAAG 68497 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 | | || || ||| || ||||| || | || || |||||||| || || Sbjct 68496 AGAGCTGCGCCTGGGGAGTACCAGCATTGAACAGAGTGGGGGATGCATGAGTGAA 68442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663207916160