Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq431 295 7e-75
seq1207 118 1e-21
seq492 118 1e-21
seq576 109 6e-19
>seq431
Length=155802
Score = 295 bits (326), Expect = 7e-75
Identities = 516/739 (70%), Gaps = 19/739 (3%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||| | || ||| | || ||
Sbjct 43634 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAAGAGATTGATCTC 43693
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | || ||||| | |||||| | ||||||
Sbjct 43694 TCCAAGGATCTCCA-CGACTGGAACAACCGTCTGAACAAGGACGAGCAGTACTTCATCTC 43752
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | || ||||| || || ||| || |||||||||||||| || || || |||||
Sbjct 43753 CCACATTCTCGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAACCTCGTTGAGCG 43812
Query 116812 TTTCGCTCAG--GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCC 116869
|| ||||| ||||||||| | ||||||| |||||||||||||| || ||||||
Sbjct 43813 CTT--CTCAGGCGAGGTGCAGATTCCCGAGGCCCGGTGCTTCTACGGTTTCCAGATCATG 43870
Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTC 116925
||||| ||| | || || |||| |||||| || || ||||| ||| | | || |
Sbjct 43871 ATGGAAAACATCCATTCTGAAACCTATTCGCTGCTAATTGACACCTACATCAAGGAGC-C 43929
Query 116926 TTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAA 116985
||| | | | | | | | || || ||||| || || || || ||| || ||
Sbjct 43930 CTCGCA-GCGCACATAC--CTATTCAATGCCATTGACACTATTCCCTGCATCCGTCGCAA 43986
Query 116986 GGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGT 117045
|||||| ||||| ||| |||||| ||| || ||| | | || | | ||||||| ||
Sbjct 43987 GGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCTACGTTTGCCCAGCGCCTAGT 44046
Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105
||||| || || ||||||||| |||| || ||||| |||||| |||| || |||||
Sbjct 44047 TGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGCCTTCGCCTCCATCTTCTGGCT 44106
Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165
|| || || |||||||| || ||||| ||| ||||||||||| || | |||||
Sbjct 44107 GCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTCATTTCTCGTGACGA 44166
Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGC 117225
||| ||||| ||||||||| || |||||||| ||| | | || || |||
Sbjct 44167 GGGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCGCACCTAAACAACCGCCCCAGCAA 44226
Query 117226 GGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285
|| | || ||||| |||| || || || | |||||| || ||||| |||||
Sbjct 44227 GGACCTAGTGCAAAAGATCATCACTGATGCCGTTGTGATCGAGAAGGAGTTCCTGACCGA 44286
Query 117286 AGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGT 117344
|| || || ||| ||||||| ||| | || ||| |||| ||| ||||| ||||
Sbjct 44287 GGCTCTTCC-CTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTACATTGAGT 44345
Query 117345 TCGTCGCCGACAGGCTGCT 117363
| || || ||| | |||||
Sbjct 44346 TTGTTGCGGACCGCCTGCT 44364
>seq1207
Length=77990
Score = 118 bits (130), Expect = 1e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || || || ||| |||| || || ||
Sbjct 69067 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 69126
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | ||||| || |||| ||||| |||||||| ||| |||||
Sbjct 69127 TCGGACACTATCGACAATGTCAAGTCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 69186
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | |||||||| ||||||
Sbjct 69187 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCTGACTAC 69246
Query 40867 AACATCCAGAAGG 40879
||||| |||||||
Sbjct 69247 AACATTCAGAAGG 69259
>seq492
Length=47418
Score = 118 bits (130), Expect = 1e-21
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| | || ||||| | | |||| |
Sbjct 44550 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 44609
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| |||||||||| || |
Sbjct 44610 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTT 44668
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| || ||||| ||||| || || | ||||| || ||||||||||||||||||
Sbjct 44669 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAA 44728
Query 40878 GGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||| |||| || || || || ||||| || | || ||
Sbjct 44729 GGAGTCCACTCTCCACCTTGTCCTGCGCCTGCGTGGTGG 44767
>seq576
Length=37320
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772
|| ||||| ||||||||| |||| || || | | || | | | |||| | |||
Sbjct 11993 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGATACTATTGACAACGTT-AAGTC 12051
Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832
|| || | ||||| ||||| || || |||||||||| || ||||| | ||| || ||
Sbjct 12052 TAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTCTCATTTTCGCCGGAAA 12111
Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
||||| || || | |||||||| |||||||||||||||||||||| | || || ||
Sbjct 12112 GCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 12171
Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||| | ||| || | || ||
Sbjct 12172 TCTAGTGCTCCGCCTGCGTGGTGG 12195
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || |||||||| || || || |||| ||||| | |
Sbjct 12709 ATGCAAATCTTTGTCAAGACCCTGACGGGCAAGACTATTACACTCGAGGTCGAGTCTTCG 12768
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | ||||| || || | ||||| ||||| ||||| | ||||||
Sbjct 12769 GATACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 12828
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| || || || || || || || | ||||||||| |||||||||
Sbjct 12829 CAGCGTCTCATCTTTGCTGGAAAGCAACTCGAGGATGGTCGCACCCTCTCTGACTACAAC 12888
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| |||| || ||| | || |||| || | || |||
Sbjct 12889 ATCCAGAAGGAATCCACTCTTCATTTGGTTCTGCGTCTGCGTGGTGGC 12936
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || |||||||| || || || |||| ||||| | |
Sbjct 12481 ATGCAAATCTTTGTCAAGACCCTGACGGGCAAGACTATTACACTCGAGGTCGAGTCTTCG 12540
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | ||||| || || | || || ||||| ||||| |||| |||
Sbjct 12541 GATACTATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAG 12600
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| || || || ||||| || |||| ||||||||| |||||||||
Sbjct 12601 CAGCGTCTCATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCTGACTACAAC 12660
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||| | || || ||| | || ||||
Sbjct 12661 ATCCAGAAGGAATCTACTCTTCATTTGGTTCTGCG 12695
Score = 102 bits (112), Expect = 8e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAA 40761
|| || || || || ||||| ||||||||| |||| ||||| || | || | | | |
Sbjct 12265 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACCATCGAC 12324
Query 40762 ACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATC 40821
| ||||| || || | || || ||||| ||||| |||| ||||| || |||||
Sbjct 12325 AATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTCATT 12384
Query 40822 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880
| || || || ||||| || |||| |||||||| |||||||||||||||||||||
Sbjct 12385 TTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGA 12443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515210151462800
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