Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq431 114 9e-21
>seq431
Length=155802
Score = 114 bits (126), Expect = 9e-21
Identities = 292/439 (67%), Gaps = 14/439 (3%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| ||||| || ||| || | || || || | || || |||| |||||||||
Sbjct 44048 GCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGCCTTCGCCTCCATCTTCTGGCTG 44107
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
|| ||| |||||||| || || | || || |||||| | ||| ||||||||
Sbjct 44108 CGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTCATTTCTCGTGACGAG 44167
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAAC---CGTGT 22926
|| || ||| ||||||||||| ||||||| ||| | |||||| | | |
Sbjct 44168 GGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCGCACCT---AAACAACCGCCCCAGC 44224
Query 22927 CAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986
||||| | || | ||||| |||||||||||| || |||| || ||| |
Sbjct 44225 AAGGACCTAGTGCAAAAGATCATCACTGATGCCGTTGTGATCGAGAAGGAGTTCCTGACC 44284
Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046
||||| || || || || ||||| || |||| | |||||| ||
Sbjct 44285 GAGGCTCTTCCCTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTACATTGAG 44344
Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCC--- 23103
|||||||| || |||||||| | ||| || || | | |||| ||| || ||||
Sbjct 44345 TTTGTTGCGGACCGCCTGCTTGTTGCTCTAGGCAACGAAAAGGTGT---ACCGTGCCACA 44401
Query 23104 AATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGAACG 23162
|| || || || |||||||| ||||| | || | | || || || |||||||||||
Sbjct 44402 AACCCCTTCGACTTCATGGAGAACATCTCGC-TCGGCGGCAAGACTAACTTCTTTGAGAA 44460
Query 23163 CCGTGTGAGTGAATATCAG 23181
||||| |||| || |||
Sbjct 44461 GCGTGTCGGTGATTACCAG 44479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356227500056215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |