Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq431 114 9e-21 >seq431 Length=155802 Score = 114 bits (126), Expect = 9e-21 Identities = 292/439 (67%), Gaps = 14/439 (3%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| ||||| || ||| || | || || || | || || |||| ||||||||| Sbjct 44048 GCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGCCTTCGCCTCCATCTTCTGGCTG 44107 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || ||| |||||||| || || | || || |||||| | ||| |||||||| Sbjct 44108 CGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTCATTTCTCGTGACGAG 44167 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAAC---CGTGT 22926 || || ||| ||||||||||| ||||||| ||| | |||||| | | | Sbjct 44168 GGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCGCACCT---AAACAACCGCCCCAGC 44224 Query 22927 CAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986 ||||| | || | ||||| |||||||||||| || |||| || ||| | Sbjct 44225 AAGGACCTAGTGCAAAAGATCATCACTGATGCCGTTGTGATCGAGAAGGAGTTCCTGACC 44284 Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046 ||||| || || || || ||||| || |||| | |||||| || Sbjct 44285 GAGGCTCTTCCCTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTACATTGAG 44344 Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCC--- 23103 |||||||| || |||||||| | ||| || || | | |||| ||| || |||| Sbjct 44345 TTTGTTGCGGACCGCCTGCTTGTTGCTCTAGGCAACGAAAAGGTGT---ACCGTGCCACA 44401 Query 23104 AATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGAACG 23162 || || || || |||||||| ||||| | || | | || || || ||||||||||| Sbjct 44402 AACCCCTTCGACTTCATGGAGAACATCTCGC-TCGGCGGCAAGACTAACTTCTTTGAGAA 44460 Query 23163 CCGTGTGAGTGAATATCAG 23181 ||||| |||| || ||| Sbjct 44461 GCGTGTCGGTGATTACCAG 44479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356227500056215