Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq1 82.4 7e-11
>seq1
Length=236255
Score = 82.4 bits (90), Expect = 7e-11
Identities = 115/159 (72%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652
||||| || || ||||||||| ||||| |||||||| ||| || | | |||||||
Sbjct 196448 AGCTGAGCGATGCGGTCGCCC-TCTTTGACCTCGAAGTCGGCGTCGTGGTGATTGAACAA 196506
Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712
| || || | || ||||| ||||| || || || || || || ||||||||
Sbjct 196507 GAGAACCTTGACCTCACCACGGTAATCGGCATCAATGACACCAGCTCCGGTATCGATGAA 196566
Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751
||| || | ||||||||||||||||| || | ||||||
Sbjct 196567 GTGTTTAGCAGCCAGGCCGGAGCGGGGGGCGATGCGGCC 196605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430047035990360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |