Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=236255 Score = 82.4 bits (90), Expect = 7e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 ||||| || || ||||||||| ||||| |||||||| ||| || | | ||||||| Sbjct 196448 AGCTGAGCGATGCGGTCGCCC-TCTTTGACCTCGAAGTCGGCGTCGTGGTGATTGAACAA 196506 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | || || | || ||||| ||||| || || || || || || |||||||| Sbjct 196507 GAGAACCTTGACCTCACCACGGTAATCGGCATCAATGACACCAGCTCCGGTATCGATGAA 196566 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||| || | ||||||||||||||||| || | |||||| Sbjct 196567 GTGTTTAGCAGCCAGGCCGGAGCGGGGGGCGATGCGGCC 196605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430047035990360