Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq797 105 1e-18 >seq797 Length=101054 Score = 105 bits (116), Expect = 1e-18 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| || | Sbjct 23116 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCTGCCA 23058 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | |||||||| |||||||||||||| ||||||||| | |||| Sbjct 23057 TTCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 23016 Score = 93.3 bits (102), Expect = 7e-15 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || ||||||| ||||| ||| | ||| ||||||| || || || | ||| ||| || Sbjct 22937 TACGAAGAGACTCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATTCGTGACGCTGTC 22878 Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660 ||| ||||||||||| || || ||||| || ||||| | ||| |||||||||| | Sbjct 22877 ACCTACACCGAGCACGCCAAGCGCAAGACCGTTACCTCGCTCGATGTCGTCTATGCTCTC 22818 Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || || || ||||||| | || ||||| || ||||| Sbjct 22817 AAGCGCCAGGGCCGTACCCTCTACGGTTTCGGTGGTTAA 22779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073915398665