Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq797 105 1e-18
>seq797
Length=101054
Score = 105 bits (116), Expect = 1e-18
Identities = 86/102 (84%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| || |
Sbjct 23116 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCTGCCA 23058
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| |||||||| |||||||||||||| ||||||||| | ||||
Sbjct 23057 TTCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 23016
Score = 93.3 bits (102), Expect = 7e-15
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600
|| ||||||| ||||| ||| | ||| ||||||| || || || | ||| ||| ||
Sbjct 22937 TACGAAGAGACTCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATTCGTGACGCTGTC 22878
Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660
||| ||||||||||| || || ||||| || ||||| | ||| |||||||||| |
Sbjct 22877 ACCTACACCGAGCACGCCAAGCGCAAGACCGTTACCTCGCTCGATGTCGTCTATGCTCTC 22818
Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| || || ||||||| | || ||||| || |||||
Sbjct 22817 AAGCGCCAGGGCCGTACCCTCTACGGTTTCGGTGGTTAA 22779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073915398665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |