Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq539 387 4e-102
>seq539
Length=40911
Score = 387 bits (428), Expect = 4e-102
Identities = 1143/1743 (66%), Gaps = 28/1743 (2%)
Strand=Plus/Minus
Query 363431 TCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCC 363490
|| ||||| | ||||||||||| || ||||| ||| |||||||||||||| | |||||
Sbjct 17943 TCGATGGTAAGATTGTTGAACGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTAT-- 17886
Query 363491 ATTGCCCGGAT---GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTG 363544
||| || || || | | ||||||| || || ||| || || || ||
Sbjct 17885 -TTGGGGTGACAAAGTCGAACGTGTGCTTGAAACCTACAA-CTT-TATGTCCAGCAAGT- 17830
Query 363545 TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTT 363604
| ||||| ||||| | || || | | |||||||| || | | | ||| ||||||
Sbjct 17829 TCTTCACTCACGCATCACCTACGCTCTTTAATGCTGGTACCCCCCAGGCTCAGTTGTCTT 17770
Query 363605 CTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA 363664
| ||||| || | | ||||| || || ||||||||| || | || || || ||||
Sbjct 17769 CGTGCTTCCTAGTCGACATGAAAGATGACAGCATCGAGGGCATTTACGATACCCTCAAGA 17710
Query 363665 ATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG 363724
|||||| | |||||||||| || ||||| || ||| | ||||| | ||||||
Sbjct 17709 CTTGTGCCATGATTTCCAAGATGGCTGGCGGTATCGGTCTCAATGTCCACCGTATTCGTG 17650
Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCT 363782
| || | | ||||||| || || || |||| |||| || | |||||||||||
Sbjct 17649 CCACTGG-CTCTTACATTGCTGGTACTAACGG-TACTTCGAACGGTATCGTTCCCATGCT 17592
Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842
||||| || |||| ||||| | || || |||||||||||| ||||| || ||
Sbjct 17591 ACGTGTTTTCAACAACACTGCCCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGC 17532
Query 363843 GTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA 363902
||||| || || |||||||| ||||| ||| | || ||||| || || | || ||
Sbjct 17531 CTTTGCCATTTACCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTGCGCAA 17472
Query 363903 AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962
||| ||||| || ||| | ||||| ||||| || |||| || || ||| | | ||
Sbjct 17471 GAACCACGGAAAGGAAGAAGTCCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 17412
Query 363963 CCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG 364022
| || |||||||| || ||| | | || | ||| | ||| | ||||| | |||||
Sbjct 17411 CTTGTTCATGAAGCGTGTTGAGAAAAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 17352
Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082
|| || | | ||| | || || || | || ||||| || |||||||| ||
Sbjct 17351 CCCCGGCTTGGCGGATTGCTATGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAA 17292
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
|||||| | ||| | | | || |||||||| |||| |||||| |||| |
Sbjct 17291 GGAGGGTCGCGGTCGCACGGTTGTCAAGGCCCAGAAGCTGTGGTATGCCATTCTGGAGGC 17232
Query 364143 GCAGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
|||| |||||| || | ||||| | ||| | |||||||| |||||||||||| ||
Sbjct 17231 CCAGACTGAGACTGGCA-ACCCTTTCATGCTTTACAAAGACCATTGCAACCGCAAGAGCA 17173
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATAC 364260
| ||| | | || ||||| | || |||| | ||||| || || |||||||| || ||
Sbjct 17172 ATCAGAAAAATCTAGGTACCA-TCCGCAGCTCAAACCTGTGCACTGAGATTATCGAGTAT 17114
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319
|| || |||||| ||| || || ||||| || || | || ||||| | || ||
Sbjct 17113 TGTGCCCCTGACGAGGTTGCTGTGTGCAACCTAGCATCTCTGGCCCTTCCTTCCTTCGTG 17054
Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374
|| | ||| | |||| | | || | || || || | || | |
Sbjct 17053 GACTACAACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACTCAAGTTGTTGTT 16994
Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434
|||| || || | || || |||| | || || | | ||||| |
Sbjct 16993 CGCAACCTAAACCGCATCATTGATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGC 16934
Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494
|| ||||| || || || |||||| |||||||||||||| | ||||| | ||| |
Sbjct 16933 AACATGCGCCACCGTCCCATTGGTGTTGGTGTACAGGGCTTGGCTGATGCTTTCCTTGCT 16874
Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554
||| ||| | || || || || || || || || || || |||| ||||||||
Sbjct 16873 CTCCGCATGCCTTTCGAATCCCCCGAAGCACGCCAGCTTAACAAACAGATTTTTGAAACC 16814
Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCT 364614
|| || |||||| | |||||||| || | || | || |||| | |||||
Sbjct 16813 ATCTACCACGCCGCACTAACTGCTTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCA 16754
Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674
|| |||||||| |||||| | || || || | || ||||||||| | ||| |||| ||
Sbjct 16753 ACCTATGAGGGTTCCCCTGTCTCCCAAGGTATCTTGCAGTTTGATATGTGGGATGTGACT 16694
Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734
|| || || ||| ||||| | | || || |||| |||||||| |||
Sbjct 16693 CCTAGTGACCTGTGGGACTGGACTTCTCTGAAGGAGAAGATTAAACAGCATGGTGTACGC 16634
Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794
|| || || | || |||||||| || || || | ||||| || || |||||
Sbjct 16633 AATTCTCTTCTGGTTGCACCCATGCCTACAGCCAGCACATCGCAGATTCTGGGCAACAAT 16574
Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854
|||||||||||||| | ||| ||| | || ||||| |||||| | || || ||
Sbjct 16573 GAGTGCTTCGAACCCTACACATCCAACATCTACCAGCGCCGCGTTCTTGCTGGCGAGTTC 16514
Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914
| ||| || || | || | || ||| ||| | || | ||| |||||
Sbjct 16513 CAGGTGGTCAACCCCTGGCTCCTACGTGACCTTGTCGATCTTGGTTTATGGTCTGACAAT 16454
Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA 364974
||||||||| || || || | ||||| ||| | |||||||| || | |||| |
Sbjct 16453 ATGAAGAACCGCATTATTGCGGACAATGGATCTATTCAGAACATCCCTAGCATTCCTGCT 16394
Query 364975 GATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATG 365034
||| | || || | ||||| ||||| |||||||||||| ||| || | | | |||
Sbjct 16393 GATATTAAAGCTCTGTACAAGACCGTTTGGGAAATTTCCCAGCGTACAGTTGTGCAAATG 16334
Query 365035 GCGGCCGATCGCGGTGCTTTTATCTGTCAGAGC-CAGTCGTTTAACGTATTCATGACTCA 365093
|| || || || |||||||| || || | | | ||||| | ||| | ||||| |
Sbjct 16333 GCTGCTGACCGTGGTGCTTTCAT-TGACCAATCGCAGTCTCTAAACATTCACATGAAAGA 16275
Query 365094 GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGAC 365153
|| ||| | |||| | || |||||| || ||| |||||| ||||| |||||
Sbjct 16274 TCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAACTAGGTCTCAAGAC 16215
Query 365154 AGG 365156
||
Sbjct 16214 GGG 16212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303330137598710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |