Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq576 87.8 2e-12 >seq576 Length=37320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 25009 TTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCG 25068 |||| ||||| | ||||| || ||||||| ||||||| ||||| ||||| || |||| Sbjct 12263 TTGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACCATCG 12322 Query 25069 AGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 | || || ||| || ||| || || || || || || || || || ||||| | Sbjct 12323 A--CAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAGCAGCGTCT 12380 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||||||||||| || || | || || | ||||| || ||| ||||| || || || Sbjct 12381 CATTTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAA 12440 Query 25187 AGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || || Sbjct 12441 GGAATCTACTCTTCACTTGGTTCT 12464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433320579935075