Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq576 87.8 2e-12
>seq576
Length=37320
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 25009 TTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCG 25068
|||| ||||| | ||||| || ||||||| ||||||| ||||| ||||| || ||||
Sbjct 12263 TTGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACCATCG 12322
Query 25069 AGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126
| || || ||| || ||| || || || || || || || || || ||||| |
Sbjct 12323 A--CAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAGCAGCGTCT 12380
Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
||||||||||| || || | || || | ||||| || ||| ||||| || || ||
Sbjct 12381 CATTTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAA 12440
Query 25187 AGAATCCACGCTACATTTAGTGCT 25210
||||| || || || || || ||
Sbjct 12441 GGAATCTACTCTTCACTTGGTTCT 12464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433320579935075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |