Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq431 192 7e-44
>seq431
Length=155802
Score = 192 bits (212), Expect = 7e-44
Identities = 484/732 (66%), Gaps = 23/732 (3%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
|| || ||||| || |||||||| ||||| ||| ||||||||||| ||||
Sbjct 44355 TCCGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCAGACCGCAG 44296
Query 92987 GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATT 93046
|| ||||| ||||||| ||| || |||||||| |||||||| || | | ||| || ||
Sbjct 44295 GGAAGAGCCTCGGTCAGGAACTCCTTCTCGATCACAACGGCATCAGTGATGAT--CTTTT 44238
Query 93047 ACTCTAC-TATTTGGTGG--------TTTTTGTACGACATAATTGTACATTAAGCACGCA 93097
| ||| | ||| ||| ||| || ||| | ||| | ||| |||
Sbjct 44237 GCACTAGGTCCTTGCTGGGGCGGTTGTTTAGGTGCGAGA-------ACAGCAGGCAAGCA 44185
Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157
|||||||| || | || ||||| || || || | ||| || ||| || | ||| ||
Sbjct 44184 AAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCAGGC 44125
Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217
| || || || || ||||| || || || || || ||| || ||||| || ||
Sbjct 44124 ATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATGCCC 44065
Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCAT 93277
|| || || ||||| || || | || | |||||| | | || | |||||||
Sbjct 44064 TCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTAGACTCCTTGTCGGTGATCCAC 44005
Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337
|| | |||||| ||||| || || || || | || || || || || ||||||
Sbjct 44004 TTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTGAATAGG 43945
Query 93338 TAATCTCGCT-CGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396
|| |||| || | || | ||||| || || |||| ||| ||||| |||||||
Sbjct 43944 TATGTGCGCTGCGAGGGCTCCTTG-ATGTAGGTGTCAATTAGCAGCGAATAGGTTTCAGA 43886
Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456
||||| || ||||| || ||||| |||||||| || | || || | ||||||||
Sbjct 43885 ATGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCGGGAATCTGCAC 43826
Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516
|| || || | ||| ||||| ||||| ||||| || ||||| || || ||||| ||
Sbjct 43825 CTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGCAAAGAA 43766
Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGA 93573
|| | || || || || | | ||| || | || | | || | ||| |||
Sbjct 43765 GGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCAGTCGTG 43706
Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633
||||| || || ||||| | ||||| ||||||| || || || || || || |||||
Sbjct 43705 GAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCAGAAGGAAGCCTCGGCCTTCTTGTA 43646
Query 93634 CATATCCCATAT 93645
||| | ||| ||
Sbjct 43645 CATCTGCCAGAT 43634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556851020132200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |