Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq492 154 3e-32
seq431 134 3e-26
seq1207 132 9e-26
seq576 131 3e-25
seq659 91.5 3e-13
>seq492
Length=47418
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| || | ||| || |||||||| || |||||||| || |||||
Sbjct 44767 CCACCACGCAGGCGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 44708
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || | | || ||||| || |||
Sbjct 44707 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGA 44648
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 44647 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 44588
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||| ||| ||||| || ||||| ||||||||||||||
Sbjct 44587 TCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 44550
>seq431
Length=155802
Score = 134 bits (148), Expect = 3e-26
Identities = 308/459 (67%), Gaps = 10/459 (2%)
Strand=Plus/Minus
Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998
|| || ||||||||||| || || || ||| |||||||| | |||||| ||||
Sbjct 44490 ACACCAGCCTTCTGGTAATCACCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGC 44431
Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058
|| ||| |||||||||||| |||||||| ||| | || ||| || || ||
Sbjct 44430 GAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCACGGTACACCTTTTCGTTGCCTAGA 44371
Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118
|| | | |||||| || || ||||| |||||||| ||||||| || | ||||||
Sbjct 44370 GCAACAAGCAGGCGGTCCGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATT 44311
Query 10119 CCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCC 10178
|| | || | |||||| | || ||| | ||| ||||| ||| | | || || ||
Sbjct 44310 CCTAGCAGACCGCAGGGAAGAGCCTCGGTCAGGAACTCCTTCTCGATCACAACGGCATCA 44251
Query 10179 TCGACGATGCTCTTTACCACGTC----AAGGGACAGCTTGTTCTCGAGCTTCGAATACAG 10234
|| ||| | | || | ||| ||| | | ||||| || | ||| ||||
Sbjct 44250 GTGATGATCTTTTGCACTAGGTCCTTGCTGGGGC-GGTTGTT---TAGGTGCGAGAACAG 44195
Query 10235 GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACC 10294
|| |||| | ||| ||||||||||| || |||| |||||| || ||
Sbjct 44194 CAGGCAAGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGT 44135
Query 10295 CAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAA 10354
|||||| |||||||| || || |||||||||||||| |||| | ||| | || |||||
Sbjct 44134 CAGACCAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAA 44075
Query 10355 CAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCT 10392
| | ||||| || ||| | |||| || |||||||
Sbjct 44074 AAAGATGCCCTCGACAGCA-GCAAAGGCAACTAGGCGCT 44037
>seq1207
Length=77990
Score = 132 bits (146), Expect = 9e-26
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| || ||||| || || || || || | ||||| || | |||||| || ||||| ||
Sbjct 69257 TTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 69198
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| |||||||| |||||||| | |||||| |||
Sbjct 69197 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTAGACTTGACATTGTCG 69138
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
|| ||||| | || || || || | ||| || || || ||||| ||||||||||||||
Sbjct 69137 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 69078
Query 68454 ATCTGCAT 68461
||||||||
Sbjct 69077 ATCTGCAT 69070
>seq576
Length=37320
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| || || || || || |||||||| || |||||
Sbjct 12479 CCACCACGCAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAC 12420
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || ||||| | || || || || ||
Sbjct 12419 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGATCCGGAGGG 12360
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || || ||||| | |||||| |||||||| || | || || |||
Sbjct 12359 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCGACT 12300
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449
|| | ||||||||| || || || |||||||||||
Sbjct 12299 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 12265
Score = 123 bits (136), Expect = 5e-23
Identities = 169/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285
||||| | || || || || |||| ||||| || || ||||| || || ||||||||
Sbjct 12944 TTTTACTGGCCACCACGCAGACGCAGAACCAAATGAAGAGTGGATTCCTTCTGGATGTTG 12885
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
|| || ||||| || | ||||| || | ||||| || || || ||||| | || |||
Sbjct 12884 TAGTCAGAGAGGGTGCGACCATCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGG 12825
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| || || || || |||||||| || ||||| | |||||| || || || || |
Sbjct 12824 TCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTATCCGAA 12765
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || | || || || || ||||| ||||||||||| || || |||||
Sbjct 12764 GACTCGACCTCGAGTGTAATAGTCTTGCCCGTCAGGGTCTTGACAAAGATTTGCAT 12709
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| ||||| || || || || || || |||||||| || || |||
Sbjct 12707 CCACCACGCAGACGCAGAACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGAG 12648
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || ||||| | || || || || ||
Sbjct 12647 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGG 12588
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || || ||||| | |||||| || || || || | || || ||
Sbjct 12587 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATAGTATCCGAAGACTCGACC 12528
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || ||||| ||||||||||| || || |||||
Sbjct 12527 TCGAGTGTAATAGTCTTGCCCGTCAGGGTCTTGACAAAGATTTGCAT 12481
>seq659
Length=28844
Score = 91.5 bits (100), Expect = 3e-13
Identities = 476/751 (63%), Gaps = 43/751 (6%)
Strand=Plus/Minus
Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326
|||||| | | |||||| ||||| |||||||||||||| | | || | | |
Sbjct 14779 CCTTGGTCTTCACACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAATTCCATCTCAGAGG 14720
Query 225327 CCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386
| || |||||||| || ||| ||| | ||| || || | | |||||| |
Sbjct 14719 CACCGAGCTCGTAGTATGACTTGGCCGAGGGGCACTTCTTGACAAACTCGGCCAGGTTAC 14660
Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCG 225445
| ||| | | ||||||| | || |||| || ||||| ||| | ||| || |
Sbjct 14659 CACGGTAACGCTTAAGCTTGAAGCGCT---CGTAGTGGACAATGTGCTG-GCAGACGTTG 14604
Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGG 225505
|||||||||||||||||||| || || |||||||| | | ||| |||
Sbjct 14603 TCAAGGAAGCCAGAGTCGTGAGAGACGATGATGGAAGT-------GCAAGGA----GAGT 14555
Query 225506 TGC----GTGATG----AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGT 225557
||| || || ||||| ||||| | || |||| ||||| ||||| ||||
Sbjct 14554 TGCACAGGTAATCCTCCAGCCACTTGACGTTCTTCACATCCAAATGGTTGGTAGGCTCGT 14495
Query 225558 CCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCC 225617
| |||||||| || |||| | || | ||| || || | ||||||||| ||||
Sbjct 14494 CAAGAAGCAGAATATCAGGGGCCTCGAAAACGGCACGGCACAGGGCCAGCTTCATCTTCC 14435
Query 225618 AGCCCCCGGACAGGGAGCCGATTGAAACAG-AGTGCTTAGCTTCGTCAAAGCCGTACTCC 225676
| || || || || | | ||| | ||| | | || ||| || || |||| ||||
Sbjct 14434 AACCACCAGAAAGAGCGGAGATCTCACCAGTAATCATTTGCTCAGTGAA-GCCGAACTCG 14376
Query 225677 AGGAGCGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAG 225736
||| || ||| | | ||| | | | || | ||||||| ||| | | ||
Sbjct 14375 TTCAGCTGCTTGATGACGTCCTCCTTGGTGGT---AGTG---ACGTTGGCGTCAGCC-AG 14323
Query 225737 A--------GGT--AATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTC 225786
||| | ||| |||||| || | | ||| | ||| | |||||| ||
Sbjct 14322 CTTCTTCATGGTCCATTCAATGGTGGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTC 14263
Query 225787 CACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAAT 225846
||| | || ||| | || || | |||||||||||| | ||| | || ||
Sbjct 14262 GACGAAAACAGTCTTAACCTCGGACTGCTTGGGGAAGCCCTCGACCTGTTCGTTGTTGAT 14203
Query 225847 CGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCC 225906
||||| | ||| || || || | || ||||||||| || ||||| | | ||
Sbjct 14202 GGCACGCATCAGAGTGGATTTTCCGGAACCATTGGGACCGCACAGACCGTAGCGCTGACC 14143
Query 225907 GCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAA 225966
||||| | ||| | || ||| || ||||||||| |||| ||||| ||||||||
Sbjct 14142 ACGCTTCAGACGCAGGTGAGTCTGGTTAAGCAGGATCTTGGCACCGTAGGCGAGGGAGAA 14083
Query 225967 CTCGCAATCGCACAGGTCCTCACCCTCCTCG 225997
||| | |||||| |||||||||||||||
Sbjct 14082 AGTGCAGTTGCACAGATCCTCACCCTCCTCG 14052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921606214006600
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